Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy13g0455 | ATGGGTAGCGACGGAAAGGTCTTCACATTGGCTGAAGTCTCTCAGCACAACAACCGTAAGGACTGTTGGTTGATCATCAATGCCAAGGACCGGGATCTCGTTGAAGACATAGAATCTGAGGTTTATAATGTAACCGAGTTCTTGGAAGACCATTCCGGTGGCGACGAGGTTTTGTTGTCAGGCACGGGTAAGGATGCAACGGATGATTTTGAAGATGTTGGTCATAGCGAGAGCGCAAGAGAAATGATGAACAAATACTACGTTGGAGAGATCGACACCTCGACGATCCCAGAAAGGTCGACATACACAGCTCCAAAGCAGCCTCACTACAATCAGGATAAGACAACGGAGTTCATCGTCAAGCTCCTCCAGTTCCTGGTTCCTCTCGCAATCTTGGGTATAGCAGTCGGTATCCGCTTTTACAGCAAATCAACCTGA | 438 | 47.72 | MGSDGKVFTLAEVSQHNNRKDCWLIINAKDRDLVEDIESEVYNVTEFLEDHSGGDEVLLSGTGKDATDDFEDVGHSESAREMMNKYYVGEIDTSTIPERSTYTAPKQPHYNQDKTTEFIVKLLQFLVPLAILGIAVGIRFYSKST | 145 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 5422322 | 5426353 | - | Maker00023921 | Lcy13g0455 | 650760 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy13g0455 | 145 | SMART | Cyt_b5_2 | 8 | 92 | IPR001199 | - | |
Lcy13g0455 | 145 | PANTHER | CYTOCHROME B5 | 5 | 137 | IPR050668 | GO:0005783(PANTHER)|GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER) | |
Lcy13g0455 | 145 | SUPERFAMILY | Cytochrome b5-like heme/steroid binding domain | 6 | 99 | IPR036400 | - | |
Lcy13g0455 | 145 | Gene3D | - | 2 | 97 | IPR036400 | - | |
Lcy13g0455 | 145 | ProSiteProfiles | Cytochrome b5 family, heme-binding domain profile. | 5 | 92 | IPR001199 | - | |
Lcy13g0455 | 145 | PRINTS | Cytochrome B5 signature | 51 | 65 | IPR001199 | - | |
Lcy13g0455 | 145 | PRINTS | Cytochrome B5 signature | 66 | 73 | IPR001199 | - | |
Lcy13g0455 | 145 | PRINTS | Cytochrome B5 signature | 41 | 51 | IPR001199 | - | |
Lcy13g0455 | 145 | PRINTS | Cytochrome B5 signature | 79 | 91 | IPR001199 | - | |
Lcy13g0455 | 145 | FunFam | Cytochrome b5 type B | 2 | 96 | - | - | |
Lcy13g0455 | 145 | Pfam | Cytochrome b5-like Heme/Steroid binding domain | 9 | 91 | IPR001199 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy13g0455 | Lcy-Chr13:5422322 | Lcy3g0069 | Lcy-Chr3:1833861 | 4.47E-47 | dispersed | |
Lcy11g1769 | Lcy-Chr11:41500761 | Lcy13g0455 | Lcy-Chr13:5422322 | 6.02E-72 | wgd | |
Lcy12g2032 | Lcy-Chr12:41663371 | Lcy13g0455 | Lcy-Chr13:5422322 | 3.21E-60 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy13g0455 | K23490 | - | csv:101213506 | 239.965 |