Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy13g0549 ATGAAAATAAAGCACAGAAAAGCTCCAAAATTTTCCCTCCTTCCCATCAGAAAACAGAGAAGGATGATGAACCAACCTGGAAAATGGGTGGCGCTGGTGGCGGCGATATGGATTCAGGCATTTGCAGGCACAAATTTTGATTTCCCCTCCTATTCTTCCGATCTGAAGGCGGCTCTGGGGATGTCGCAGGTGGAGCTCAATTATCTCGCGGTGGCTTCCGACGTCGGCAAGGCCTTTGGATGGTGCTCCGGCGTTGCTCTATTGTATTTTCCTTTGTGGGTGGTGATGATCATGGCTGCTTCCATGGGGTTTCTTGGCTATGGCCTTCAATGGCTTCTCCTTCAAAGGATTGTCTCTCTGCCTTACTCCATGGTATATCTTCTCTGCTTGTTGGCTGGATGTAGTATTTGCTGGTTCAATACGGTCTGCTATGTCTCGTGCATCCAAAACTTTCCAGCCAACCGCGCGCTTGCACTGTCCTTGATTGTCAGCTTCAATGGCGTCAGTGCAGCTCTATACACCCTAATTGCCAATGCAGTAGACCCCAATGATGCCAGCTTGTACCTTTTCCTAAATGCAGTGGTTCCTCTCATCATCTCTGTCGTTGCTCTCCCCCCAATCCTTCATCAGCCACCGGTTCAGCCGTCCTCTGCCGATGCCACCCGCCATGACCCCCTCATCTTCATCTGCTTATACATCACGGCAGTTATCACGGGCCTATATCTAATCACCTTCAATTCCATGCCTTCCTACAAATACGGGTCCCAAATTCTGTTGGCAGGGGCCTTTGCCCTTTTACTAGTTCCTCTTTGTTTGCCAGGAATTCTGAGTACTCGCAGGTGGTTGTTTCGGATGGTATCCACCAGCTTGAGCTGTCTTATTCACTCTAGATTCGACATTGTCGATCATGAGCTTCAACAGGAGCTCATCACTGTTGGAACAGAAAGAAGTGGCACGAAGGTCATCATCCCTTTTGATTCTAAAGAGAAGGAAATCATTTCATGGAAGGTGATGGAGAAAGAGAATTTGGCAGTGCTTGATGAAGAGCATTCGGCTAAGATGCTCATGCGACGGTTGGACTTTTGGCTCTATTATGTTGCATACTTTTGTGGTGGGACGATTGGGTTGGTTTATAGCAACAATCTTGGGCAGATCTCACAGTCGCTAGGATACAATTCGTTGACAAGTTCCCTTGTAACACTCTACTCTTCTTGCTCCTTCTTTGGGCGGTTAATCTCAGCAGCCCCAGATTTCATGCGTGAAAAGGTGCAGTTTGCCAGAACAGGGTGGCTAGCCATTGCACTAGTGCCAACTCCAATCGCCTTCATTTTACTCGCTGCATCAGGCAGCAAGATCGCATTACAAGCCGGCACTGGCTTGATCGGCCTAAGCTCGGGATTCATATTCTCAGCCTCGGTCTCAATCACATCAGAGTTATTCGGACCGAACAGCTCAGGGGTCAACCACAACATCCTCATCACTAACATCCCCCTCGGCTCGTTCCTCTACGGCGTCTTGGCGGCGGTGGCCTACGATTCAAGCGCCGGAAGTTCACACCAGACGACGGCGCTGGGGGACGCGGTGGTATGCATCGGCCGGCAATGCTATCTGCAGACGTTCATATGGTGGGCTTGCATCTCCATCGTCGGCCTCGCTTCTAGCTTCTTGCTTTTCCGACGGACGAAACCGGCTTACGACCGCCATTGCGAGAGTAACCTAATCAAGACACCGCCATTTTAG 1740 50.0 MKIKHRKAPKFSLLPIRKQRRMMNQPGKWVALVAAIWIQAFAGTNFDFPSYSSDLKAALGMSQVELNYLAVASDVGKAFGWCSGVALLYFPLWVVMIMAASMGFLGYGLQWLLLQRIVSLPYSMVYLLCLLAGCSICWFNTVCYVSCIQNFPANRALALSLIVSFNGVSAALYTLIANAVDPNDASLYLFLNAVVPLIISVVALPPILHQPPVQPSSADATRHDPLIFICLYITAVITGLYLITFNSMPSYKYGSQILLAGAFALLLVPLCLPGILSTRRWLFRMVSTSLSCLIHSRFDIVDHELQQELITVGTERSGTKVIIPFDSKEKEIISWKVMEKENLAVLDEEHSAKMLMRRLDFWLYYVAYFCGGTIGLVYSNNLGQISQSLGYNSLTSSLVTLYSSCSFFGRLISAAPDFMREKVQFARTGWLAIALVPTPIAFILLAASGSKIALQAGTGLIGLSSGFIFSASVSITSELFGPNSSGVNHNILITNIPLGSFLYGVLAAVAYDSSAGSSHQTTALGDAVVCIGRQCYLQTFIWWACISIVGLASSFLLFRRTKPAYDRHCESNLIKTPPF 579
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 6950347 6953991 - Maker00023350 Lcy13g0549 650854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy13g0549 579 Gene3D MFS general substrate transporter like domains 326 554 IPR036259 -
Lcy13g0549 579 Gene3D MFS general substrate transporter like domains 2 207 IPR036259 -
Lcy13g0549 579 SUPERFAMILY MFS general substrate transporter 23 563 IPR036259 -
Lcy13g0549 579 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 28 565 - GO:0016020(PANTHER)
Lcy13g0549 579 Pfam Nodulin-like 28 273 IPR010658 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy11g0032 Lcy-Chr11:326128 Lcy13g0549 Lcy-Chr13:6950347 3.85E-83 dispersed
Lcy13g0549 Lcy-Chr13:6950347 Lcy6g0758 Lcy-Chr6:7466468 2.78E-141 dispersed
Lcy13g0549 Lcy-Chr13:6950347 Lcy8g1243 Lcy-Chr8:38966669 1.40E-79 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy13g0549 - - - 0.0