Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy13g0701 ATGGTTGTTTGGTTTGAGCAGAAACACCCGGGCCGTCTTTTCTCTTTCCGCAAGCAGCTCGTCCGCAAGGTGTTTGGTTTGGGTTTTCTTGTTCACTCGCGCAGTAAGGTTCTTCTCTCTCGATTTTCATTCAGTTTCAGCGAGCTTAATCTCCCTCTTTTTCTCGTTCTCAGCCAAGAATCGCGAGCAGTAAGCAAACCACGCGGCGACAGCATCGATTGTTATCTCGCACTCGCGTTCTTTCCTCTCCGGCATCCAGACTCGCGCGATTCCCACCCTTTTTGGTGTTTCTGGAATGAGCTTTGGAACACATGGCTAATAGTACCAAGAATGGAAAGAAAAACTAGAAGTGGTGAACTTAAATTGATCCAGATCCCTTACGATGTCATTGATTCAAAGAATGAATATAACTTTAGCACCTCTGTAGTTTTAAGAATTCTTTTAAAAGAGAAGTTTAATGAAGACAGACTGCAAGAGGAGGAAAGGAAAGCAAAGATCGTCATTTCTGGAGCCTCTCGATTATTGGGCAGCAAGTTTCAAGGCCGTTTAGGTGTTGTTCGTTTCAGTTTTAACTCAATACGAACCCCAGGCAAAGCGTATTCAAAGGAGTTTGGTGCTGGTCCGTTTAGAGCTTATTTGGATAAGTTCCAGCAAGGAATTGGCTCTATCGGGCAGGATCTGATTGAAGAAGATGGGGAAGATGGGGGTGAGGGTTTGTTGAGAAAGAAGAAGATGTTCAGTGTCACTGTCGCCTCTCTCCTGTTCACTGCCGCCGCCGCTGGCGTCTTTCTTCCAGCTCGTACCGCCACCGTCGTCTTTCTTCTGTTCGTGCCGTCGCAGCCTCCCTCGATTTTCTACTCTGTTACCGGCCTGTCTTGCATTGTATATGAATGTGGAGTGTGTTCGATTGTGATGACTTTGGTCATAGAAGATCTTCGAGCTATGTCTAAAGAAGAAGAAAGCCCAAAAGCTAACAGAAGGACAACCCGGTCCTCTTCAGCTGCCGTTTTAAGGGATTCTGGTGAAACAAAGAAATGTGATCCACACATTCCAACTTTTAATGATCTTGTTTTTGGAGAAGATACCATTAGTAAGGAAGATCTCTTATCTAGCTTTCCTGGACGTCGTACTGAAATTCTTGAACTTCTTAACCTTTTGGGACCCCTGAATTCTCCCATGCTTCCCCTCTTTGTTTATGGTGGCACGTCTTCTGGGAAAACTAGTGTCATTCTACAGATATTCCGCCATCTCAACCGTCCTTTTGTCTATTCAAGTTGTCGTACTTGTTACTGTTTACGAATTCTATTTGAGTCTATCCTGAATCAGTTATTACTTCATCAAAAAGATGCAGACAATTTATATTTGAGTGCAATGCGCTGTGAAAAGCCATCAGGTTTTGTTAGCTTTCTTCGTGAAGCCTTAGCTAAAGTGGTAAAAACTCTCCAGGGGAACCCAGGAAAGTTAAGTACCAAGAAGTTGACAGGACAAGGGCATGGTCATATGATCTACCTGATTTTTGACAACTTGGAACTTGTTAGAGACTGGGACAAGAGTTCAAGCGTATTGCCTTTTCTCTTTAAACTCCATGAAATTTTAAACATGAATGAGATTGGATTTATCTTCATCAGTAACACTTCTCCTGACACATACTATTCAAATATGGGTTACGTGGAGCCTATCCCTGTTTATTTCTCTGAGTACACGGAAGATGATCTTCGGCAAATTTTAATGAGGAATCAAACTAATCAAGAGATGTATTCTTCCTTTTTGAATGTTGTATTGAGGCCATTCTGTAGAATTACTAGACAAGTGAATGAGCTGTCCATAGCCTTTTCATCGTTGTATAAAACATATTGTGAAGCTTTAGGTGATCCGAACAATGTTTCTAATGAGTCCAACAAGAGGATTCGGTTCAGTCATTTTCAGCCACAAATCACTCCTGCTTTGAATCAGATATTTAAAATTTCATCACAGCCTTCTGAAATTAATAATTTGAAGGAACCCAAGAGAAAAGGTGGTAGTAAGAAGTTTGATGGGTTTGACTCTTTCGAGCACTTGGACTTTCACATGTCTACTTCTGCAAAATATCTTCTTCTTTCAGCATTCCTTGCTTCAAGAAATCCAGCTACACTTGATGCATCACTTTTTGATTCAACTGGGGGCCCTAGTAGTCGAAAAAGCAAGAAGAGGCCATCTGAAAAATCAATCGAGCAGAAGGAAATTTCAGAACAGGAGTTGCTTATGAAAGGACCTGGAACTTTTCCATTGGAGAGATTGCTTGCAATATTTCAGTGCATTACGTCTGTGGCAGAAACCTCACTTGAAGATGAGCAAGGAAATGTCCTAATGGAAAGTCAAAATGAGGATAGCGAACTCATGTCTGATGTTCTCTTGCAACTTTCCAGCCTCTGCAATGCAAGTTTTGTGATCAAAGGAGGAAGTTGCCCATTAGAAGGTTCAACTCGATATCGCTCTACAGTGTCTGAAGATATGGCTTTGAAGAACCTCTTTGATTCTCAGGTGCCAAGAGGTATGGTTGCGTAG 2544 41.98 MVVWFEQKHPGRLFSFRKQLVRKVFGLGFLVHSRSKVLLSRFSFSFSELNLPLFLVLSQESRAVSKPRGDSIDCYLALAFFPLRHPDSRDSHPFWCFWNELWNTWLIVPRMERKTRSGELKLIQIPYDVIDSKNEYNFSTSVVLRILLKEKFNEDRLQEEERKAKIVISGASRLLGSKFQGRLGVVRFSFNSIRTPGKAYSKEFGAGPFRAYLDKFQQGIGSIGQDLIEEDGEDGGEGLLRKKKMFSVTVASLLFTAAAAGVFLPARTATVVFLLFVPSQPPSIFYSVTGLSCIVYECGVCSIVMTLVIEDLRAMSKEEESPKANRRTTRSSSAAVLRDSGETKKCDPHIPTFNDLVFGEDTISKEDLLSSFPGRRTEILELLNLLGPLNSPMLPLFVYGGTSSGKTSVILQIFRHLNRPFVYSSCRTCYCLRILFESILNQLLLHQKDADNLYLSAMRCEKPSGFVSFLREALAKVVKTLQGNPGKLSTKKLTGQGHGHMIYLIFDNLELVRDWDKSSSVLPFLFKLHEILNMNEIGFIFISNTSPDTYYSNMGYVEPIPVYFSEYTEDDLRQILMRNQTNQEMYSSFLNVVLRPFCRITRQVNELSIAFSSLYKTYCEALGDPNNVSNESNKRIRFSHFQPQITPALNQIFKISSQPSEINNLKEPKRKGGSKKFDGFDSFEHLDFHMSTSAKYLLLSAFLASRNPATLDASLFDSTGGPSSRKSKKRPSEKSIEQKEISEQELLMKGPGTFPLERLLAIFQCITSVAETSLEDEQGNVLMESQNEDSELMSDVLLQLSSLCNASFVIKGGSCPLEGSTRYRSTVSEDMALKNLFDSQVPRGMVA 847
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 10126165 10134509 - Maker00023235 Lcy13g0701 651006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy13g0701 847 MobiDBLite consensus disorder prediction 714 742 - -
Lcy13g0701 847 MobiDBLite consensus disorder prediction 723 742 - -
Lcy13g0701 847 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 369 580 IPR027417 -
Lcy13g0701 847 Gene3D - 372 552 IPR027417 -
Lcy13g0701 847 MobiDBLite consensus disorder prediction 318 343 - -
Lcy13g0701 847 Pfam Origin recognition complex (ORC) subunit 5 C-terminus 690 833 IPR047088 -
Lcy13g0701 847 Pfam AAA ATPase domain 372 530 IPR041664 -
Lcy13g0701 847 FunFam Origin of replication complex subunit 5 372 553 - -
Lcy13g0701 847 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 5 364 834 IPR020796 GO:0000808(InterPro)|GO:0003688(PANTHER)|GO:0005634(InterPro)|GO:0005664(PANTHER)|GO:0006260(InterPro)|GO:0006270(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy13g0701 Lcy-Chr13:10126165 Lcy6g1143 Lcy-Chr6:13101828 1.38E-13 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy13g0701 K02607 - csv:101223023 868.611