Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy13g1061 | ATGGCAAGCTTGGTATCGTGTAATCCAGATGGATGGTGCAGTTTAAAAAGTTTGCTGTTGGGCACCGGAGGGTGCTTGGTTTGGACATGGATCATTATCCATAGATGGAACCAAAGAAACAAGACAGGTCCCAAAACATGGCCACTCGTAGGAGCAGCAATCGAACAGTTCCTAAACTACCACAGAATGCACGATTGGCTTCTCGGTTACCTCAATCTCTCCAAAACTGTTGTTGTCCCTATGCCTTTCACTACTTATACTTACATTGCTGACCCGGCTAATGTTCAGCACATTCTCAAGACCAACTTTGCTAATTATCCCAAGGGTGATTTATATCATTCGTACATGGAAGTGCTTCTTGGCGATGGGATCTTCAACGTAGATGGAGAGCTGTGGAGGAAACAGAGGAAAACTGCGAGCTTTGAATTTGCGTCAAAAAATTTGAGGGATTTCAGTGCCCTAGTTTTTAGAGAATACAGTCTCAAGCTCTCAGCTATTTTAACTCGGGCGACTTTAGACAAACAACAAGTTGACATGCAGGAACTGTTGATGAGAATGACTTTGGACTCCATATGCAAGGTGGGATTTGGTGTTGAAATTGGATCCTTAGCTCCAAATTTGCCAGAAAATCGCTTCGCTAAGGCTTTTGACACAGCAAACATCATCGTCACCCTTCGCTTCATTGATCCTTTGTGGAAAATTAAAAGATTCTTTAATTTGGGATCCGAAGCTCTCCTCGACAAGTCCATCAAAATCATCGATGACTTTACCTACTCTGTAATTGCCACAAGGAAAAAAGAGATAGAAGAAGCTCGAACCACAGGCAAAGATGGCATTAAGATAAAACATGACATATTATCAAGATTCATTGAGTTAGGCGAAGATCCAAGCAACAATTTCACAAACAAAAGCTTGAGAGATGTGGTTCTCAACTTTGTGATTGCTGGACGTGACACAACAGCAGCCACTCTTTCATGGGCTATTTATATGGTAATGACTCATTCTCATGTAGCTGACAAACTTTACTCAGAGCTCAAGAGTTTTGAAGAAGAAAGAGCCAAAGAAGAGAGAATTTCATTGCTTCAGCACCATCCAACAACTGATCTTCAATCCTTCGAGAGAAGAGTTATGCAGTTTGCACAACTCCTCAATTACGATTCACTTGCCAGATTGCATTATTTGCATGCTATGATCACTGAGACACTTCGTCTTTACCCTGCAGTGCCCCAGGACCCAAAGGGAGTTTTGGAGGATGATGTTTTACCAGATGGAACAAAGGTAAAAGCAGGAGGAATGGTGACATATGTTCCTTACTCAATGGGAAGAATGGAATACAATTGGGGCTCTGATGCAACTTGTTTTAACCCTGAAAGATGGCTCAAACAAGGCCTTTTCCACTCCGAATCTCCATTCAAGTTCACAGCTTTTCAGGCTGGACCAAGGATCTGCATGGGGAAAGACTCGGCATATCTGCAAATGAAGATGGCTCTTGCCATTTTGTGCAGATTCTACAAATTTAGTTTGGTCAGTGGCCATCAAGTCAACTACAGAATGATGACTATTCTCTCCATGGCCAATGGCTTGAAAGTTACCGTTGCTACACGCTCTTGA | 1611 | 42.4 | MASLVSCNPDGWCSLKSLLLGTGGCLVWTWIIIHRWNQRNKTGPKTWPLVGAAIEQFLNYHRMHDWLLGYLNLSKTVVVPMPFTTYTYIADPANVQHILKTNFANYPKGDLYHSYMEVLLGDGIFNVDGELWRKQRKTASFEFASKNLRDFSALVFREYSLKLSAILTRATLDKQQVDMQELLMRMTLDSICKVGFGVEIGSLAPNLPENRFAKAFDTANIIVTLRFIDPLWKIKRFFNLGSEALLDKSIKIIDDFTYSVIATRKKEIEEARTTGKDGIKIKHDILSRFIELGEDPSNNFTNKSLRDVVLNFVIAGRDTTAATLSWAIYMVMTHSHVADKLYSELKSFEEERAKEERISLLQHHPTTDLQSFERRVMQFAQLLNYDSLARLHYLHAMITETLRLYPAVPQDPKGVLEDDVLPDGTKVKAGGMVTYVPYSMGRMEYNWGSDATCFNPERWLKQGLFHSESPFKFTAFQAGPRICMGKDSAYLQMKMALAILCRFYKFSLVSGHQVNYRMMTILSMANGLKVTVATRS | 536 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 23713799 | 23718747 | + | Maker00026877 | Lcy13g1061 | 651366 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy13g1061 | 536 | PRINTS | E-class P450 group I signature | 304 | 321 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy13g1061 | 536 | PRINTS | E-class P450 group I signature | 473 | 483 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy13g1061 | 536 | PRINTS | E-class P450 group I signature | 324 | 350 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy13g1061 | 536 | PRINTS | E-class P450 group I signature | 483 | 506 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy13g1061 | 536 | PRINTS | E-class P450 group I signature | 395 | 413 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy13g1061 | 536 | FunFam | Alkane hydroxylase MAH1 | 37 | 536 | - | - | |
Lcy13g1061 | 536 | CDD | CYP86A | 75 | 528 | - | - | |
Lcy13g1061 | 536 | PRINTS | P450 superfamily signature | 396 | 407 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy13g1061 | 536 | PRINTS | P450 superfamily signature | 474 | 483 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy13g1061 | 536 | PRINTS | P450 superfamily signature | 315 | 332 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy13g1061 | 536 | PRINTS | P450 superfamily signature | 483 | 494 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy13g1061 | 536 | Pfam | Cytochrome P450 | 43 | 527 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy13g1061 | 536 | SUPERFAMILY | Cytochrome P450 | 33 | 535 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy13g1061 | 536 | Gene3D | Cytochrome P450 | 27 | 536 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy13g1061 | 536 | PANTHER | CYTOCHROME P450 | 30 | 528 | - | - | |
Lcy13g1061 | 536 | Coils | Coil | 338 | 358 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy11g1912 | Lcy-Chr11:42827593 | Lcy13g1061 | Lcy-Chr13:23713799 | 1.50E-123 | dispersed | |
Lcy11g1915 | Lcy-Chr11:42890679 | Lcy13g1061 | Lcy-Chr13:23713799 | 3.09E-130 | dispersed | |
Lcy13g1061 | Lcy-Chr13:23713799 | Lcy3g1870 | Lcy-Chr3:45893797 | 8.05E-116 | dispersed | |
Lcy13g1061 | Lcy-Chr13:23713799 | Lcy5g1143 | Lcy-Chr5:24565175 | 1.14E-98 | wgd | |
Lcy13g1061 | Lcy-Chr13:23713799 | Lcy5g0812 | Lcy-Chr5:12554633 | 3.26E-103 | wgd | |
Lcy13g1061 | Lcy-Chr13:23713799 | Lcy5g1119 | Lcy-Chr5:23354334 | 6.58E-87 | wgd | |
Lcy13g1061 | Lcy-Chr13:23713799 | Lcy7g1694 | Lcy-Chr7:34189017 | 1.08E-12 | wgd | |
Lcy13g1061 | Lcy-Chr13:23713799 | Lcy8g0844 | Lcy-Chr8:30430463 | 3.42E-11 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy13g1061 | K20495 | - | csv:101222076 | 904.049 |