Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy13g1150 ATGGCGGGGAAGCCCAACTCGGTTTCCTTCAGGGTTCCCTACAGGAACCTCCACGATGCAGAAGTGGAGATGGTCGCTGTCGACGAGCAGCAGCTCCAAGGGATCGATCTCAATTCTCCTTCTTCTGATACATGTCCCAATGGAACCCCAGACAGTTCGTCATCAACGCCTCATGTTAGATCTACGCCCAATAGTCTGATTATCTTGATTCTCAGTTGTACTATTGCGGCCGGTGTTCAATTTGGTTGGGCATTGCAGCTTTCCCTACTAACTCCTTATATTCAGGTTTTGTTTCTCGCTCGTGTCTCTGATTTCGTTTTCGTCTTTGAGTCGCTAGGTACACTTGGAATTGAGCATGCATTTTCTTCGTTTATTTGGCTTTGCGGTCCCATCACTGGTCTCGTGGCGCAAGGCGCAACCTTAGCGCCTCGCTTCGAAGAAGCGAGGCGCAGTGAGGAAGGCGCGGCGAAGGCGCGTCCAAGGCTCGCGCCTTCCTCGAAGCGAGACCTCCGTACTTGGTCATTCGGAGTGTCAAATATCGTATTCAAGCTTGTTCAACCATGTGTTGGTATATGGAGTGATAAGTGTTCTTCAAAATATGGAAGGAGGCGTCCCTTTATTCTTGCTGGGTCTTTAATGATAGCAGTTGCTGTAAGCTGTGTTTTTCTGGGAGATACGAAGGAACATTGCAGAGTATATAAGGGAACACGAACAAGGGCAGCTATTATCTTTGTAATAGGCTTTTGGATGCTTGATCTTGCAAACAATACGGTGCAGGGTCCTGCTCGTGCTCTTCTAGCTGATTTATCAGGTCCTGATCAACACAATGTTGCAAATGCGGTATTTTGTTCATGGATGGCTGTTGGTAATATCCTAGGTTTTTCAGCAGGAGCTAGTGGAAACTGGCACAAATGGTTTCCTTTCCTTTTGAGCGATGCTTGCTGTGAAGCCTGTGGAAACCTTAAAGCAGCATTTCTTGTTGCTGTGCTTTTTCTAACCATATGTACTCTTGTTACCATATATTTTGCCGATGAAGTTCCCCTTACTGCTGTAGATCAACCACCACGTTTATCAGATTCTGCTCCTTTGTTGAATGGGAATGCACAAAAAAATCCTAATATTTTAAAACCAGAACTTAACAGTCCTAATGGGAGCAATGTTGATTATGGCTATCAAGAAAATATGAATCTGCAAAATTCAAAATCAAAAATTGAGGAAAATCACAGTGAAGGTTATTATGATGGTCCTGCAACAGTGGTAGTCAAATTGTTGACCAGTTTAAGACATTTACCACCGGCCATGCATTCAGTGCTTCTTGTGATGGCTCTTAGCTGGTTATCCTGGTTTCCCTTCTTCTTATTCGATACAGATTGGATGGGAAGGGAAGTGTATCATGGGGACCCAAAAGGCAGTTTGACTGAAGAACAGGTTTATGATCAGGGTGTCAGAGAAGGTGCATTTGGTTTGCTATTGAATTCTGTTGTTCTTGGTATCAGTTCTTTCTTTATAGAGCCAATGTGTCAGCGCATGGGACCAAGACTTGTCTGGGCAATGAGCAACTTTATTGTGTTTGCATGCATGATGGGAACTACTGTTATCAGTTTAATATCCGTCAGTCAATACTCTGAAGGAATTGAACATATTATTGGGGGAAATTCAACAATAAAAAATGCTGCATTGGCTGTTTTTGCTCTTCTTGGTTTTCCTCTTGCTATAACATATAGCGTTCCCTTTTCTTTGACAGCAGAATTGACTGCCGATTCTGGTGGTGGGCAAGGATTGGCTATAGGAGTTCTCAATCTTGCAGTTGTTATTCCCCAGATGATTGTATCCTTGGGTGCTGGGCCATGGGATGCCTTATTCAGTGGAGGAAACATTCCTGCATTTGCTTTGGCTTCTGTATGTGCGCTTGCGGCTGGAGTTGTTGCGGTTCTTAGACTGCCTAATCACACCAACAGCTCTTTCAAATCAACAGGTTTTCATTTTGGTTAA 1992 43.98 MAGKPNSVSFRVPYRNLHDAEVEMVAVDEQQLQGIDLNSPSSDTCPNGTPDSSSSTPHVRSTPNSLIILILSCTIAAGVQFGWALQLSLLTPYIQVLFLARVSDFVFVFESLGTLGIEHAFSSFIWLCGPITGLVAQGATLAPRFEEARRSEEGAAKARPRLAPSSKRDLRTWSFGVSNIVFKLVQPCVGIWSDKCSSKYGRRRPFILAGSLMIAVAVSCVFLGDTKEHCRVYKGTRTRAAIIFVIGFWMLDLANNTVQGPARALLADLSGPDQHNVANAVFCSWMAVGNILGFSAGASGNWHKWFPFLLSDACCEACGNLKAAFLVAVLFLTICTLVTIYFADEVPLTAVDQPPRLSDSAPLLNGNAQKNPNILKPELNSPNGSNVDYGYQENMNLQNSKSKIEENHSEGYYDGPATVVVKLLTSLRHLPPAMHSVLLVMALSWLSWFPFFLFDTDWMGREVYHGDPKGSLTEEQVYDQGVREGAFGLLLNSVVLGISSFFIEPMCQRMGPRLVWAMSNFIVFACMMGTTVISLISVSQYSEGIEHIIGGNSTIKNAALAVFALLGFPLAITYSVPFSLTAELTADSGGGQGLAIGVLNLAVVIPQMIVSLGAGPWDALFSGGNIPAFALASVCALAAGVVAVLRLPNHTNSSFKSTGFHFG 663
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 26546029 26552869 - Maker00026896 Lcy13g1150 651455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy13g1150 663 FunFam Sucrose transport protein SUT5 435 655 - -
Lcy13g1150 663 PANTHER SUGAR TRANSPORTER 65 645 - GO:0008506(PANTHER)|GO:0016020(PANTHER)
Lcy13g1150 663 CDD MFS_SLC45_SUC 69 645 - -
Lcy13g1150 663 MobiDBLite consensus disorder prediction 38 59 - -
Lcy13g1150 663 Pfam Major Facilitator Superfamily 173 536 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
Lcy13g1150 663 SUPERFAMILY MFS general substrate transporter 172 650 IPR036259 -
Lcy13g1150 663 Gene3D MFS general substrate transporter like domains 162 647 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy13g1150 Lcy-Chr13:26546029 Lcy4g1200 Lcy-Chr4:26072899 2.70E-115 dispersed
Lcy13g1150 Lcy-Chr13:26546029 Lcy4g1195 Lcy-Chr4:25885630 2.70E-115 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy13g1150 K15378 - csv:101205348 1034.25