Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy13g1263 | ATGGCGGAGGACATGTACGGCATGCGCTCCACTCCGGATTTCTCGGCTAAGTCCTTCCTTCCACCGGAGAATCTCATCCTTCCCGTCGATTACCAGAGCTTGCTTACCTCCACCGGCTTTCGCGATCGGATTCCTATCTTCGGATCCGATGAATTACTTTCCGCTGCTGCTTCCGCCATATCCGAAGCTGAAGCACCTTCCATCACTCCAGATTTTTCGCTCGGACAAGACGTTCTCACCGTTATCAAGGCCAAAATTGTCTCTCATCCAACCTATCCTCGCTTGCTCCAAGCTTATATCGACTGCCAGAAGGTTGGAGCTCCTCCGGAGATAGCGAGCTTGTTGGAGGGAATCCGGCGAGAAAACGACAGTCATAAACAAAACGCCATTTCCACGTGCTTTGGAGCCGATCCCGAGCTCGACGAGTTCATGGAAGCGTACTGTGACATGTTGGTCAAGTATAAATCAGATCTCTCAAGGCCTTTTCATGAAGCTTCCTCCTTCTTGAATAACATCCAACTGCAACTTAGCAACCTCTGTGCTGGTGCCTCCACTAGAAGCCCTTCCAGTCATCGCTATCGCATAGGCTACCACCACTTAGTTTCCCCAATCCTTTTGATTTGCGCAATTGGGAATCATCGACGTATTGAGAACCGCCCAGAAAAACTCGGAAGAATGATATGGTTTCGCCTTGGGAAAAGAACAGCAACAACTACTGGTACTGGAGGCTGGACCTTCCCAATAGTTACCTTACCTAAACCTTTTCCTTTTCAGTTTAATGTTGTTATCTGGGCTGGGGACTGA | 804 | 49.13 | MAEDMYGMRSTPDFSAKSFLPPENLILPVDYQSLLTSTGFRDRIPIFGSDELLSAAASAISEAEAPSITPDFSLGQDVLTVIKAKIVSHPTYPRLLQAYIDCQKVGAPPEIASLLEGIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNNIQLQLSNLCAGASTRSPSSHRYRIGYHHLVSPILLICAIGNHRRIENRPEKLGRMIWFRLGKRTATTTGTGGWTFPIVTLPKPFPFQFNVVIWAGD | 267 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 29778043 | 29780067 | + | Maker00025590 | Lcy13g1263 | 651568 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy13g1263 | 267 | SMART | KNOX2_2 | 130 | 181 | IPR005541 | GO:0003677(InterPro)|GO:0005634(InterPro) | |
Lcy13g1263 | 267 | Pfam | KNOX1 domain | 82 | 123 | IPR005540 | GO:0003677(InterPro)|GO:0005634(InterPro) | |
Lcy13g1263 | 267 | Pfam | KNOX2 domain | 134 | 180 | IPR005541 | GO:0003677(InterPro)|GO:0005634(InterPro) | |
Lcy13g1263 | 267 | PANTHER | FUSED COMPOUND LEAF 1 | 81 | 185 | - | - | |
Lcy13g1263 | 267 | SMART | KNOX1_2 | 80 | 124 | IPR005540 | GO:0003677(InterPro)|GO:0005634(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy13g1263 | Lcy-Chr13:29778043 | Lcy2g0672 | Lcy-Chr2:5747501 | 1.03E-41 | dispersed | |
Lcy13g1263 | Lcy-Chr13:29778043 | Lcy7g0162 | Lcy-Chr7:1454864 | 2.02E-85 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy13g1263 | - | - | - | 0.0 |