Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy13g1263 ATGGCGGAGGACATGTACGGCATGCGCTCCACTCCGGATTTCTCGGCTAAGTCCTTCCTTCCACCGGAGAATCTCATCCTTCCCGTCGATTACCAGAGCTTGCTTACCTCCACCGGCTTTCGCGATCGGATTCCTATCTTCGGATCCGATGAATTACTTTCCGCTGCTGCTTCCGCCATATCCGAAGCTGAAGCACCTTCCATCACTCCAGATTTTTCGCTCGGACAAGACGTTCTCACCGTTATCAAGGCCAAAATTGTCTCTCATCCAACCTATCCTCGCTTGCTCCAAGCTTATATCGACTGCCAGAAGGTTGGAGCTCCTCCGGAGATAGCGAGCTTGTTGGAGGGAATCCGGCGAGAAAACGACAGTCATAAACAAAACGCCATTTCCACGTGCTTTGGAGCCGATCCCGAGCTCGACGAGTTCATGGAAGCGTACTGTGACATGTTGGTCAAGTATAAATCAGATCTCTCAAGGCCTTTTCATGAAGCTTCCTCCTTCTTGAATAACATCCAACTGCAACTTAGCAACCTCTGTGCTGGTGCCTCCACTAGAAGCCCTTCCAGTCATCGCTATCGCATAGGCTACCACCACTTAGTTTCCCCAATCCTTTTGATTTGCGCAATTGGGAATCATCGACGTATTGAGAACCGCCCAGAAAAACTCGGAAGAATGATATGGTTTCGCCTTGGGAAAAGAACAGCAACAACTACTGGTACTGGAGGCTGGACCTTCCCAATAGTTACCTTACCTAAACCTTTTCCTTTTCAGTTTAATGTTGTTATCTGGGCTGGGGACTGA 804 49.13 MAEDMYGMRSTPDFSAKSFLPPENLILPVDYQSLLTSTGFRDRIPIFGSDELLSAAASAISEAEAPSITPDFSLGQDVLTVIKAKIVSHPTYPRLLQAYIDCQKVGAPPEIASLLEGIRRENDSHKQNAISTCFGADPELDEFMEAYCDMLVKYKSDLSRPFHEASSFLNNIQLQLSNLCAGASTRSPSSHRYRIGYHHLVSPILLICAIGNHRRIENRPEKLGRMIWFRLGKRTATTTGTGGWTFPIVTLPKPFPFQFNVVIWAGD 267
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 29778043 29780067 + Maker00025590 Lcy13g1263 651568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy13g1263 267 SMART KNOX2_2 130 181 IPR005541 GO:0003677(InterPro)|GO:0005634(InterPro)
Lcy13g1263 267 Pfam KNOX1 domain 82 123 IPR005540 GO:0003677(InterPro)|GO:0005634(InterPro)
Lcy13g1263 267 Pfam KNOX2 domain 134 180 IPR005541 GO:0003677(InterPro)|GO:0005634(InterPro)
Lcy13g1263 267 PANTHER FUSED COMPOUND LEAF 1 81 185 - -
Lcy13g1263 267 SMART KNOX1_2 80 124 IPR005540 GO:0003677(InterPro)|GO:0005634(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy13g1263 Lcy-Chr13:29778043 Lcy2g0672 Lcy-Chr2:5747501 1.03E-41 dispersed
Lcy13g1263 Lcy-Chr13:29778043 Lcy7g0162 Lcy-Chr7:1454864 2.02E-85 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy13g1263 - - - 0.0