Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy13g1319 ATGGCCTCGCAAAACCGCCCTTCTCCATCCCTCGAGACCATCGAAAACCAGCCGGAATCCGGTAATCCGACGTCCCCGGGCAGTATTCCGGGAAGGATCGTGGAAAAGCTGAAAAGCAATCTGGTATTCCAGTCAAAATGGGCTGAATTGAACGGCGCAATGGGCGATTTGGGGACATATATTCCCATAGTTTTAGCCTTGACACTGTCCAAAAACCTCAATCTTGGCACCACATTGATTTTCACCGGAATCTACAACATCATCACCGGCCTGATCTACGGCGTTCCGATGCCGGTCCAGCCGATGAAGTCGATCGCCGCCGCGGCCCTGGCCGAGCCCGACTTCGGCGTGCCGGAGATCATGGCGGCCGGAATCCTGACCGGCGGGATCCTGTTTGCTCTCGGTGCGACGGGGCTGATGCATTTGGTTTACAAATTCATCCCGTTGGCGGTCGTGAGAGGAATTCAATTGGCTCAAGGATTGTCGTTTGCTCTAACGGCTGTTAAATATGTTCGTTATGATCAGAATATGGCGAAATCGAAATCTCTTGATGGTCGAGAGTGGCTTGGATTAGATGGGTTGGTTTTGGCCATTGTTTGTGCTTGTTTTGTGATCGTCGTCAACGGCGCCGGAGAAGAAGAACAGCACGAAGAAGCCACGGCGGATCCAAAAGAACACGAGATTGAAAATGGAGGCCATGGAATAGCAAAAGGAAGAGGAACAGAGAAGCTCAGGAAGATCATAACTTCACTTCCATCAGCTTTCATGATCTTCCTATTGGGCGTCATTTTTCTGTTCATCCGAAAGCCCGAAGTGGTGAAAGAAGTTAAATTCGGGCCGTCGTCGATGAGCATTATGAAGATCAAAAAGAGCCAATGGAAAAAAGGCTTTATAAAGGGCACAGTTCCTCAGCTTCCTCTGTCGATTCTGAACTCAGTGATCGCCGTCTGCAAGCTGTCGGTGGACCTTTTTCCGGGGAAGGTTTTCACCGTCACGTCGCTGTCGGTGACGGTGGGGCTCATGAACATGGTCGGCTGCTGGTTCGGCGCCATTCCGACCTGCCACGGCGCCGGTGGGCTGGCTGGGCAGTACAAGTTCGGCGGCCGGAGCGGCGCCTGCGTCGCCTTGCTCGGCGCCGCGAAGTTGCTACTTGGCTTGGTGCTTGGAAGCTCTCTCGCAAAGATCCTAAATGAATTTCCAGTGGGAATTTTGGGGGTTCTGCTGCTGTTTGCCGGAGTTGAGCTGGCGATGGCGGCGAGAGACATGAACACCAAAGAACAGGCGTTGGTGATGCTGATATGCACCGGAGTTTCACTGGTTGGCTCCAGCGCCGCGCTCGGGTTCTTGTGCGCCATGGTGGTGCACGTGCTACTCTGGCTCAGAAAATGGGGCAAAAAATAA 1401 53.1 MASQNRPSPSLETIENQPESGNPTSPGSIPGRIVEKLKSNLVFQSKWAELNGAMGDLGTYIPIVLALTLSKNLNLGTTLIFTGIYNIITGLIYGVPMPVQPMKSIAAAALAEPDFGVPEIMAAGILTGGILFALGATGLMHLVYKFIPLAVVRGIQLAQGLSFALTAVKYVRYDQNMAKSKSLDGREWLGLDGLVLAIVCACFVIVVNGAGEEEQHEEATADPKEHEIENGGHGIAKGRGTEKLRKIITSLPSAFMIFLLGVIFLFIRKPEVVKEVKFGPSSMSIMKIKKSQWKKGFIKGTVPQLPLSILNSVIAVCKLSVDLFPGKVFTVTSLSVTVGLMNMVGCWFGAIPTCHGAGGLAGQYKFGGRSGACVALLGAAKLLLGLVLGSSLAKILNEFPVGILGVLLLFAGVELAMAARDMNTKEQALVMLICTGVSLVGSSAALGFLCAMVVHVLLWLRKWGKK 466
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 30835836 30840148 - Maker00025560 Lcy13g1319 651624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy13g1319 466 MobiDBLite consensus disorder prediction 1 29 - -
Lcy13g1319 466 MobiDBLite consensus disorder prediction 215 237 - -
Lcy13g1319 466 MobiDBLite consensus disorder prediction 1 27 - -
Lcy13g1319 466 PANTHER - 29 465 IPR031563 GO:0015098(InterPro)|GO:0015689(InterPro)
Lcy13g1319 466 Pfam Molybdate transporter of MFS superfamily 297 415 IPR031563 GO:0015098(InterPro)|GO:0015689(InterPro)
Lcy13g1319 466 Pfam Molybdate transporter of MFS superfamily 48 163 IPR031563 GO:0015098(InterPro)|GO:0015689(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy13g1319 Lcy-Chr13:30835836 Lcy3g2074 Lcy-Chr3:47666869 1.41E-157 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy13g1319 - - - 0.0