Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy13g1363 ATGCCCAATCCTTGGCTCTTCTTCCTCCTCTTCCTCCTCCTCTTCAACCCCTCGCCGCCCATTTCCGCCGCCGACGCCACCGAAGCCCTCCTCCGATTCAAATCCTCTCTGACCAACGCCGCCGCATTATCCAACTGGAACTCCTCCGCCCCTCTCTGCTCCGGCGACCCCCGCTACTGGGCCGGCCTGATCTGCAAAAACGGCCGACTGCACGGCCTCCGCCTCGAGAACATGGGCCTGGGCGGCGCCGTCGACGCCGCCGCCCTGGCCGCCCTGCCGACGCTGAGGACTCTGAGTCTGATGAACAATGGGCTTGAAGGCCCATTGCCCGACGTGAAGCAAATCGGGGCGCTTAAGGCTCTGTATCTGTCGAATAACAATTTTTCTGGTTCGATTTCTGGAAATGCCTTTGAAGGAATGAGGAATTTGAAGAAATTGTACTTGGGCCGGAATCGATTTTCCGGCGAGATTCCGGCGTTGGTGGCGGAATTGAAGGGGCTTGTGGAATTGGGATTGGAGGAGAATTTGTTTGAAGGAAGGATTCCGGATTTTGAAGAAAGGGATTGGAAGTTTTTGAATCTTTCGGGTAATCGCTTGGAAGGGCCGATTCCTTATGGGTTGAAGAACTCTAATTCCACTTCGTTTCTTGGTAAGATTCGGAATCCGGATTCCGAATCCTGGGCCTTGGGCGTTACAGATGTTATCAGAGCGGAACCTCTCCCACATGTTAGCTACATCCATATTCAACAAGTTTGGAAATTTTGTACAGGAAATAAAGGGCTATGTGGAGAGCCACTACCACCATGTAAATCATCCACAAAAAAGTGGCCCATTCTCATCGGAGTCTTCTCCGGCGCCGCCGCCTTAATCCTCTTTCTCCTCCTCCTCTGCTGCTTTCTCCGGTCATCCAAATCATCCGCCGCCGTGTACGACGACGCAAAAATCAAACCCAAATTATTCTTCTCTCCCAAAGCCCTCTTCAAAAGGCCGGAAAAGGCCTACCAATATCCCTCGACCGACTCGGACGACAACTCGAAGGTGAGCGGTCCGACCGGGTCGAGTCTGTACTTCGTGCGGACCGACCGGCCGCGGTTCGGCTTCCAAGAACTGCTCGGGGCGTCGGCCGAAGTTCTGGGCAGTGGGAGCTTTGGGTCGTCTTACAAAGCGGTGCTTTCGGATGGGTCGGCGGTGGTGGTGAAGAGATTCCGGGAAATGAACGCCGCCGGAAGAGATGAGTTTTACGGCCACATGCGGCGGCTGGGACGGCTGTCGCATCCGAATTTGCTGCCGCTTGTTGCGTTTTATTATGGGAAAGATGATAAGCTTTTGGTGTCTGACTTTGTTAACAATGGCAGCTTGGCTAGTCACCTCCATGCCCGACGAGCACCGGGGAGTCCAGGGCTAGAGTGGCCAACGCGGCTAAATATCATAAAAGGAGTAGCGAGAGGCTTATTGTATCTGCACAAAGAGCTTCCCAATCTAAGCCTTCCACACGGCCACTTGAAATCCTCCAACGTCCTTCTCGACCAAAACTTCACTCCCTTTCTCTCCGACTACGCCCTCTCCCCGCTCCTCCCACCCTCCCACGCCCACCGCCACATGGCCGCCTTCAAGTCGCCGGAGTTCGCCGCCCACCACGACCGCACCTCCAAGTCCACCGACGTCTGGAGCCTCGGCATCTTGATCCTCGAGACCCTCACCGGCAGGTTCCCGGCCAACTATCTCTGCCACGGCAAGGGCGCCAACGCCGACCTCGCCGCCTGGGTCCAGACCGTCGTCCGGGAGGAGTGGACGGCGGAGGTCTTCGACGGCGACATGGATTGTTGTCGCTATTGGGACGGAGAGATGTTGAAGCTTTTGAAGATTGGGATGTGTTGCTGCGAGTGGGACGTTGGGAAGAGGTGGGGCTTGAAAATGGCCGTTGAGAAGATTGAGGAGGTCCATTTCAACGAGGTTGAGGATCATGAGGAGTATTATTCTTCTTATGGGAGTGATGGGGGATTCTATTCTAATTCGTCTCTTAACGGTCGTCGCACCGAGGATGAATCGTCGTTCTTGGGATGTTTGATGCGAATTTGGAAATCTGCAGAGCAACTAGCACTACAACAATTAAGGTCTTTCCCGACGCACATATGCATCGGGAAAGATCGGAATACGCGTCGGCAAAGGTTCTCCCGACGCGAATTCAGACGTTGGCAAAAAAGTCGGCAAAAACACGTCGACAGAGCCTCTGTCGATGCGTATTTTTCATGCGTCGACAGAGACCATCTCTGCCGAAGCGTAAGTTGGGGAGGGATTATGGGGCTTTTCTGCCGACACGTTGACTTCCGCGTCGACAGAGGGCATTTCTGCCGACACGGAGGTCAACGCGTCGGCAGAAAGCGATGGGCTCGATTTTCTGCCGACGTGTTGACTATGCGTCGGTAG 2427 54.72 MPNPWLFFLLFLLLFNPSPPISAADATEALLRFKSSLTNAAALSNWNSSAPLCSGDPRYWAGLICKNGRLHGLRLENMGLGGAVDAAALAALPTLRTLSLMNNGLEGPLPDVKQIGALKALYLSNNNFSGSISGNAFEGMRNLKKLYLGRNRFSGEIPALVAELKGLVELGLEENLFEGRIPDFEERDWKFLNLSGNRLEGPIPYGLKNSNSTSFLGKIRNPDSESWALGVTDVIRAEPLPHVSYIHIQQVWKFCTGNKGLCGEPLPPCKSSTKKWPILIGVFSGAAALILFLLLLCCFLRSSKSSAAVYDDAKIKPKLFFSPKALFKRPEKAYQYPSTDSDDNSKVSGPTGSSLYFVRTDRPRFGFQELLGASAEVLGSGSFGSSYKAVLSDGSAVVVKRFREMNAAGRDEFYGHMRRLGRLSHPNLLPLVAFYYGKDDKLLVSDFVNNGSLASHLHARRAPGSPGLEWPTRLNIIKGVARGLLYLHKELPNLSLPHGHLKSSNVLLDQNFTPFLSDYALSPLLPPSHAHRHMAAFKSPEFAAHHDRTSKSTDVWSLGILILETLTGRFPANYLCHGKGANADLAAWVQTVVREEWTAEVFDGDMDCCRYWDGEMLKLLKIGMCCCEWDVGKRWGLKMAVEKIEEVHFNEVEDHEEYYSSYGSDGGFYSNSSLNGRRTEDESSFLGCLMRIWKSAEQLALQQLRSFPTHICIGKDRNTRRQRFSRREFRRWQKSRQKHVDRASVDAYFSCVDRDHLCRSVSWGGIMGLFCRHVDFRVDRGHFCRHGGQRVGRKRWARFSADVLTMRR 808
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 31701227 31708181 - Maker00025703 Lcy13g1363 651668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy13g1363 808 Gene3D Ribonuclease Inhibitor 24 223 IPR032675 -
Lcy13g1363 808 Gene3D Transferase(Phosphotransferase) domain 1 448 664 - -
Lcy13g1363 808 Pfam Leucine rich repeat 118 176 IPR001611 GO:0005515(InterPro)
Lcy13g1363 808 Gene3D Phosphorylase Kinase; domain 1 352 447 - -
Lcy13g1363 808 Pfam Protein kinase domain 376 641 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy13g1363 808 SUPERFAMILY Protein kinase-like (PK-like) 376 648 IPR011009 -
Lcy13g1363 808 Pfam Leucine Rich Repeat 190 209 IPR001611 GO:0005515(InterPro)
Lcy13g1363 808 FunFam Nuclear pore complex protein NUP107 23 183 - -
Lcy13g1363 808 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Lcy13g1363 808 SUPERFAMILY L domain-like 25 214 - -
Lcy13g1363 808 ProSiteProfiles Protein kinase domain profile. 372 649 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy13g1363 808 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 25 648 IPR046959 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy13g0027 Lcy-Chr13:390357 Lcy13g1363 Lcy-Chr13:31701227 3.34E-136 dispersed
Lcy13g1363 Lcy-Chr13:31701227 Lcy2g0359 Lcy-Chr2:2949894 2.92E-147 dispersed
Lcy10g1468 Lcy-Chr10:38633280 Lcy13g1363 Lcy-Chr13:31701227 1.22E-33 wgd
Lcy13g1363 Lcy-Chr13:31701227 Lcy9g1757 Lcy-Chr9:42775728 2.95E-172 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65574 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy13g1363 K28077 - csv:101214710 866.685