Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy13g1687 ATGAGCCAAACAGTACTTCAGGGTTTTTCGTCATATAAAAATTTCGAGCATCATCTTCCCGCCATTGCAAATCACCAGATTTTCATCGATCCGATCATATCATCTGTGCTAAACCAAAAGCCATTTTCAGCCGTCGAATTCTTGCAGTTCGTACAGATTCCGGACATGGCCGAAGAGGAATCCGGAGAGGTTATCCGGCCGCAATTTCCGACAGGACGAGTGAAGAAGATAATGAAGATCGACAAGGACGTCGGCAAAGTGAATTCAGAAGCCCTGTTTCTCGTCTCATGCGCCACCGAGCTCTTCCTCAAGCTTCTCGCTGAAAAATCTGCAGAAGTTGCCGTCGAGAAGAAACGGAAGACCGTGAAGCTTGAACACATTCGAGTCGCCGTCAAAAGGCATCGATCGATCAGTGATTTTCTCCTCGATTCGCTTCCTCTTCCACCTCAGCCGTCGGATGCTCCGGCGAAGGACGAGAATCGCCCTCGCACTGTCGTTGATAAAGCGCCTCCTGAAGGAACCCGTCGAATCGATGATTTCTTTCGCCGGTCAGCAAAGACAACGTCGGCGGAGACCAATGAGTCATAG 588 49.66 MSQTVLQGFSSYKNFEHHLPAIANHQIFIDPIISSVLNQKPFSAVEFLQFVQIPDMAEEESGEVIRPQFPTGRVKKIMKIDKDVGKVNSEALFLVSCATELFLKLLAEKSAEVAVEKKRKTVKLEHIRVAVKRHRSISDFLLDSLPLPPQPSDAPAKDENRPRTVVDKAPPEGTRRIDDFFRRSAKTTSAETNES 195
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 35828038 35828625 + Maker00033820 Lcy13g1687 651992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy13g1687 195 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 64 167 IPR050568 GO:0000976(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)
Lcy13g1687 195 Gene3D Histone, subunit A 38 146 IPR009072 GO:0046982(InterPro)
Lcy13g1687 195 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 68 131 IPR003958 -
Lcy13g1687 195 MobiDBLite consensus disorder prediction 156 185 - -
Lcy13g1687 195 MobiDBLite consensus disorder prediction 142 195 - -
Lcy13g1687 195 SUPERFAMILY Histone-fold 65 149 IPR009072 GO:0046982(InterPro)
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
19410 None None None None Lcy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy13g1687 - - - 0.0