Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy13g1744 ATGTCAAAACCCTGGGGCGGAATCGGAGCCTGGGCTGCTGATGCCGAGCGTGCCGAGGCTGAGGAACGAGAGGCGCAAGCTGCGGCCGCCGCCTCCCAAGCTGAATCCAAGAATTTCCCTAGCCTTAGGGAAGCTGTCAACACCAAGCCCAAGAAGAAGAAGATGACGCTCTCGGAATTCACTATGGGGACCTTGACGGGTCCGGGCGCCGGCAGTAGGCAAACGGAGAGTCAGGGATTGACGCCGGAGGAGATGCTTCGGCTTCCGACTGGTCCCAAAGACCGTTCGGATGAGGAAATGCGGTCTGGCCGGCTCGGTGGGGGATTTCCTAGTTATGATCGGCAAAGTATGCCTGCTGGTCGGTTTCGAGACCGTGATGAAGGCGATGGGTCTTGGGGTGGTGGTCGACGATCGTATGGTGGGTTCGACGAGGAACGCAGAGGTCCACCTCCTAGGGCTTCCAATTTCGATCAACCTTCGAGGGCTGACGAGGTGGATAATTGGGCAATGACGAAGAAATCTCCCACATTGGATTCAGGGCGACAAAACAGGTATGGGTCGCTAGGCGGTGGCATGGGTGGGAGTGGGATTGGTGGTGGTGGGATTGCATCTAGGGCAGACGAGGTCGATAACTGGGCAAGTGCGAAGAAGCCTATTCCATCGAGATCCTCCACATTTGGTTCTGGTTTCCGTGACCGTGAGGCGAATGAGCCCGATCGCTGGACTAGAGGCCGTTCACGTGATAGTGACACAGAACGACCCCGATTAGTACTGGATCCACCCAAAGGTAATGTCGTTACAAATGAAGCAACAAGGACGAACAAGCCAAGTCCTTTTGGAGCAGCAAGGCCAAGAGAGGAGGTTTTGGCTGAGAAGGGGTTGGACTGGAAGAAGCTGGATACAGAAATTGAGGCCAAAAGAACCAGTAGGCCAACCAGTGCTCACTCTAGCAGGCCTTCGAGTGCTCAATCCAGCCGTTCGGAGGGTCCAGGAATACAGGGCGTAGAAAATGTGGTGAAGCCGAGGCCAAAAGTCAATCCATTTGGGGATGCCAAACCTAGGGAAGTTTTGCTGGAGGAACGTGGCAAGGACTGGCGAAAGATAGATCTGCAACTTGAGCATCGTGCTGTTGACAGGCCTGAAACAGAAGAAGAAAAGATGTTGAAAGAGGAAATTGATGTTCTAAGAAAGGAACTTGAGGAAGGCTTATCTCTGAATAATAACAAAGAATCGGTGCAAGAATCTGCTGGAGAGATACCAAATCTGCGTGACAGAATAAATAAAAAAGAACGTGAACTGGAGACACTGGTCCTTGATTTGGATGATAAAGTTCGTTTCGGGAAGAAAGCCACTGAGAGACCTGGCTCTGGAGCAGGTAGGGCTGCCGTCTTTCCAGAAAGACCACCTTCTCAAGGATCCTTTGATGAGTCCAGAAGTTTTGAGTCTATAGACAGGCCTCGATCACGTGGCACTGGCACTGCAGATGTATGGAGTAGATCTGCTGATGATAGAAAACCAATCCAAGGTGCCAGAGATAGAGGATTTTTGGGCAACAGAGACATGGAGAGGTTTGGATTCGTCTGTCATTTTGTTCCTCTCTGTTGA 1605 51.9 MSKPWGGIGAWAADAERAEAEEREAQAAAAASQAESKNFPSLREAVNTKPKKKKMTLSEFTMGTLTGPGAGSRQTESQGLTPEEMLRLPTGPKDRSDEEMRSGRLGGGFPSYDRQSMPAGRFRDRDEGDGSWGGGRRSYGGFDEERRGPPPRASNFDQPSRADEVDNWAMTKKSPTLDSGRQNRYGSLGGGMGGSGIGGGGIASRADEVDNWASAKKPIPSRSSTFGSGFRDREANEPDRWTRGRSRDSDTERPRLVLDPPKGNVVTNEATRTNKPSPFGAARPREEVLAEKGLDWKKLDTEIEAKRTSRPTSAHSSRPSSAQSSRSEGPGIQGVENVVKPRPKVNPFGDAKPREVLLEERGKDWRKIDLQLEHRAVDRPETEEEKMLKEEIDVLRKELEEGLSLNNNKESVQESAGEIPNLRDRINKKERELETLVLDLDDKVRFGKKATERPGSGAGRAAVFPERPPSQGSFDESRSFESIDRPRSRGTGTADVWSRSADDRKPIQGARDRGFLGNRDMERFGFVCHFVPLC 534
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 36377651 36382557 + Maker00034018 Lcy13g1744 652049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy13g1744 534 MobiDBLite consensus disorder prediction 1 353 - -
Lcy13g1744 534 MobiDBLite consensus disorder prediction 285 311 - -
Lcy13g1744 534 MobiDBLite consensus disorder prediction 498 514 - -
Lcy13g1744 534 MobiDBLite consensus disorder prediction 312 331 - -
Lcy13g1744 534 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B 1 452 IPR010433 GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0003743(InterPro)
Lcy13g1744 534 Pfam Plant specific eukaryotic initiation factor 4B 1 514 IPR010433 GO:0003743(InterPro)
Lcy13g1744 534 Coils Coil 412 439 - -
Lcy13g1744 534 MobiDBLite consensus disorder prediction 59 81 - -
Lcy13g1744 534 MobiDBLite consensus disorder prediction 118 132 - -
Lcy13g1744 534 MobiDBLite consensus disorder prediction 448 514 - -
Lcy13g1744 534 Coils Coil 15 37 - -
Lcy13g1744 534 MobiDBLite consensus disorder prediction 232 257 - -
Lcy13g1744 534 MobiDBLite consensus disorder prediction 88 102 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy13g1744 Lcy-Chr13:36377651 Lcy8g1219 Lcy-Chr8:38585882 3.74E-31 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy13g1744 K03258 - csv:101206526 844.343