Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy13g2017 | ATGTCGGCAACCTCCATTACAATCCCTTGTCTTCAACCCCAGTTGCGATTTCCGTCGCAGAAAGCGCCGGCGAGACCTCGTTCGAAGGTTGGGTTTGTTTCCCTACGCCCGATCTACGCCGCCGACCAGTCCTCGTCGTCCGTTAAAGCGCCGCAGCGGACGGTTTCGCCGCCGGAACCGGCGACGAAGCTTCCGTTGAGGAAGATTCCCGGCGACTATGGCCCGCCGGTGTTCGGGCCGTTGAAGGACCGACAGGACTACTTTTACAATCAGGGGAGAGAGGAGTATTTGAAATCTCGAATGCTTCGATACGAATCGACTGTTTACAGAACCAACATGCCACCGGGTCCGTTTATTTCTTCGGATTCTCGAGTTGTCGTTTTACTCGACGGCAAGAGTTTCCCTGTTCTCTTCGACAATTCTAAAGTTGAGAAGAAGGATCTCTTCACCGGAACTTACATGCCTTTAACAGAACTCACCGGCGGCTACCGGGTTCTGTCCTATATTGACCCATCGGAGCCCAATCACGAGAAGCTCAAGCAACTGATCTTCTTCCTCCTCAAGCAAAGCCGGGATAAAATTATGCCGGAATTTCACTCTACTTTTTCGGAGCTGTTCGAGACTCTGGAGAAGGAGTTGGCCACCGTCGGTAGAGCAGGGTACAATGCTCCCGGTGAACAGGCGGCGTTTAATTTCTTGGCTCGGTCTCTCTTCGGCGCCAATCCGGCTGATACCAAATTGGGCCAAGATGCTCCGAAATTGATTTCGAAATGGGTTCTGTTTCAGCTTGGCCCTGTTCTCAGTCTTGGACTCCCCAAGCTCGTCGAGGAGCTCCTCCTCCGGACGGTCCGGCTACCGCCGGCGCTGGTTAAAGCCGATTACCAGCGGCTATACGACTTCTTTTACCAGTCGTCGGAGGCGGTGTTTGCGGAGGCGGATAGATTGGGGATTTCGAGGGAAGAAGCTTGCCACAATTTGCTCTTCACCACTTGCTTCAATTCGTTCGGAGGAATGAAAATCTTCTTCCCCAATATGATCAAATGGATCGGCCGTGCCGGAGCGAATCTCCACACCCAACTCGCACGGGAGATTCGAACCGCCGTTAAAGCCCACGGCGGGAAGATCACGATGGGCGCTATGGAACAGATGCCTCTGATGAAATCGGTGGTGTACGAAGCATTCAGAATCGAGCCGCCGGTTCCGGTTCAGTACGGTCGGGCGAGGAAGGATCTTGTGATCGAAAGCCACGACGCGGCTTTCGAGATCAAAGAAGGGGAAATGATTTGTGGGTACCAGCCATTCGCGACCAGAGATCCGAAAATCTTCGACAGAGCCGACGAATTCGTGCCAGATCGGTTCACTGGCGACGGCGAGGAGTTGCTGCAGCACGTCTTGTGGTCAAACGGACCGGAGAATCAGTCGCCGTCGGTTCAGAACAAGCAGTGCGCCGGAAAAGACTTCATCGTCTTCATCTCTCGCCTTCTGGTGGTGGAACTCTTCCTCCGGTACGACTCCTTCGACATCGAAGTCGGGAACTCGCCGTTGGGCGCCGCCGTGACTGTAACTTCCCTAAAGAAAGCAAGCTTTTGA | 1590 | 53.96 | MSATSITIPCLQPQLRFPSQKAPARPRSKVGFVSLRPIYAADQSSSSVKAPQRTVSPPEPATKLPLRKIPGDYGPPVFGPLKDRQDYFYNQGREEYLKSRMLRYESTVYRTNMPPGPFISSDSRVVVLLDGKSFPVLFDNSKVEKKDLFTGTYMPLTELTGGYRVLSYIDPSEPNHEKLKQLIFFLLKQSRDKIMPEFHSTFSELFETLEKELATVGRAGYNAPGEQAAFNFLARSLFGANPADTKLGQDAPKLISKWVLFQLGPVLSLGLPKLVEELLLRTVRLPPALVKADYQRLYDFFYQSSEAVFAEADRLGISREEACHNLLFTTCFNSFGGMKIFFPNMIKWIGRAGANLHTQLAREIRTAVKAHGGKITMGAMEQMPLMKSVVYEAFRIEPPVPVQYGRARKDLVIESHDAAFEIKEGEMICGYQPFATRDPKIFDRADEFVPDRFTGDGEELLQHVLWSNGPENQSPSVQNKQCAGKDFIVFISRLLVVELFLRYDSFDIEVGNSPLGAAVTVTSLKKASF | 529 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
13 | 39139344 | 39140933 | + | Maker00033728 | Lcy13g2017 | 652322 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy13g2017 | 529 | Pfam | Cytochrome P450 | 358 | 456 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy13g2017 | 529 | MobiDBLite | consensus disorder prediction | 44 | 67 | - | - | |
Lcy13g2017 | 529 | FunFam | Allene oxide synthase, chloroplastic | 64 | 529 | - | - | |
Lcy13g2017 | 529 | CDD | CYP74 | 98 | 522 | - | - | |
Lcy13g2017 | 529 | SUPERFAMILY | Cytochrome P450 | 65 | 505 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy13g2017 | 529 | PRINTS | E-class P450 group IV signature | 383 | 399 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy13g2017 | 529 | PRINTS | E-class P450 group IV signature | 482 | 500 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy13g2017 | 529 | PRINTS | E-class P450 group IV signature | 436 | 454 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy13g2017 | 529 | Gene3D | Cytochrome P450 | 60 | 529 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy13g2017 | 529 | PANTHER | CYTOCHROME P450 26 | 68 | 503 | - | GO:0009535(PANTHER)|GO:0009695(PANTHER)|GO:0009941(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy13g2017 | Lcy-Chr13:39139344 | Lcy3g1081 | Lcy-Chr3:35565141 | 2.23E-177 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy13g2017 | K01723 | - | csv:101221732 | 927.932 |