Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy13g2044 TTCTCTAGGGTTCGCTCCATTACAGGCATTTTCCCTCCCATTCTTGAAGTAACTGTAATCGATTGTGAAAAAATCACGCTGAAACAGAGAGAGGAAGAAATCGCAGCCGCCGGTCTTGGGTTTCGGTTTCAGAGGCAGTTCATGGAGATCGATGATTTGGACGATGGGGAGTTTGCATTTTCGAGGAACTATTTTCTGGCTAAGGAATTGGGCGGCTCGAGTAAGAAATCTTCTCGGAAACTCGCCGACATCGACGTCGTCGACGAACAGGAATTGAGGGCGGCGGCGGCGAAAATTGAGCCTAAGCATGAGAAAGAGATTGCGGCTCTGATATCCAGCTACAAAAGTTTGTACTCCCAATGGGTTTTTGAGCTCAGATGCGGTTTTGGACTTCTAATGTATGGATTTGGGTCGAAGAAGGCCTTGATGGAAGATTTTGCTTCGACAGCATTGATGGATTATTCTGTAATAGTTGTTAATGGCTATCTTCAATCAGTCAATGTTAAACAGGTTGTAGTAGCCATAGCTGAAGTTTTGTCGGATCAGTTGAAATCCCGACCCAGAAATGCATCAGGGAGCACATCTAAAGATCATCGGCCATTTACTTCGCGATCCATGGACGACGTCTTTTCATTTTTGAATGGATCAAATGAGGAAGACAAGGATTGTTTTGTTTGCGTTGTGATACACAACATTGATGGACCTGGGTTGAGAGATTCTGAAACGCAAGAGTATCTTGCACGGGTTGCTGCTTGTTCCCATGTTCGAATTATTGCCTCCGTTGACCACGTGAATGCACCTCTTTATAAAGTGTGGGACAAGAAGATGGTTCACACACAATTTAACTGGTTATGGTATCATGTTCCAACATTTGCCCCTTACAAGGTTGAAGGAACGTTCTTCCCTTTGATTCTTGCACATGGTGGTACCGCTCAAAGTGCGAGAACTGCTACGATAGTTTTACAGAGTTTGACACCCAATGCACAAAGTGTTTTTAAAGTTCTTATAGAACATCAGCTATCTAATCCTGATGAAGAAGGTATGCCAATCAACAACCTATACGCAATTTGTCGGGAGCGCTTCCTAGTTAGCAGCCAGGTAACACTGAACTCCCATTTGACTGAATTTAAGGATCACGAGTTGGTGAAGACCAGAAGGCATTCTGATGGTCAAGATTGCTTGTATATACCTCTTCCATCTGAAGCACTTGAAAAACTATCGATGGAGTTGAGATAA 1236 43.61 FSRVRSITGIFPPILEVTVIDCEKITLKQREEEIAAAGLGFRFQRQFMEIDDLDDGEFAFSRNYFLAKELGGSSKKSSRKLADIDVVDEQELRAAAAKIEPKHEKEIAALISSYKSLYSQWVFELRCGFGLLMYGFGSKKALMEDFASTALMDYSVIVVNGYLQSVNVKQVVVAIAEVLSDQLKSRPRNASGSTSKDHRPFTSRSMDDVFSFLNGSNEEDKDCFVCVVIHNIDGPGLRDSETQEYLARVAACSHVRIIASVDHVNAPLYKVWDKKMVHTQFNWLWYHVPTFAPYKVEGTFFPLILAHGGTAQSARTATIVLQSLTPNAQSVFKVLIEHQLSNPDEEGMPINNLYAICRERFLVSSQVTLNSHLTEFKDHELVKTRRHSDGQDCLYIPLPSEALEKLSMELR 411
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 39403385 39406335 + Maker00025304 Lcy13g2044 652349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy13g2044 411 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 2 62 409 IPR007220 GO:0000808(InterPro)|GO:0003688(PANTHER)|GO:0005634(InterPro)|GO:0005664(PANTHER)|GO:0006260(InterPro)
Lcy13g2044 411 Pfam Origin recognition complex subunit 2 77 401 IPR007220 GO:0000808(InterPro)|GO:0005634(InterPro)|GO:0006260(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy13g2044 K02604 - csv:101204992 642.884