Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy13g2119 ATGGAAACTCCACTTCATAACTATTTTTTCATCTTCCCAACAATCTTCCTTCTCTCCTACTTCCTCATCACCCATTTACTCCAAATCAAGAACCGCTGCCGGAGGCATCTCCCCCCGAGCCCGGCGGCAGTCTCCCTCCCAATTCTCGGCCATCTCCACCTCTTAAAGAAGCCCCTCCACCGAACCCTCGCAAAACTCTCCGCCCAGCATGGCCCTGTTCTCCTCCTCCGCTTCGGCTCCCGCCCCGTCCTCCTCGTCTCCTCCCCATCCGCCGCGGAGGAATGCCTCGCCAAAAACGACGTCGCTTTCGCCACCCGCCCCCGCCTCTCCGCCGGAAAGCACCTCGGCTGCAACTACACCACCATCCTCTGGGCGCCCTACGGCCCACTCTGGCGCGACCAAAGGCGCATCGCCACTCTGGAGATATTCTCACCGACCCGAATCCACATGTACGGCGGCGTGAGAGCAGAGGAAGTGAAGTTGCTGATACGCCGGCTCTGTGAAGCCCAGCCAGAGACCGGAGATGGGTTTGGAGTGGTGGAGATGAAGAGGGCGTTTTTCGAGACGGTGCTTAACGTTATGATGAGGATGATCGCCGGGAAGCGGTATTGCGGGGAGAGAGAAGGGGAGGCGGAGGAGGCGGAGAGGTTTAGAGAGATGGTGAAAGAGGGGTTTGAAGTGAGTGGGGCTACGAATGTGGGGGATTTTGTGCCGTTTCTGAAGTGGGTTGGATTGTGGAATGGGATTGAGAAAAGGATGGAGAGATTGCAAGCTTTGAGAGGAGGGTTTATGCAGAATTTGATTGAGGAACGTAGAAGGATGAGAAAGAATTTTTCTCATTGTTGTGCTGATGGTGATGAGAAAAGATGCAGGGTAATGGTGGATGTTCTTTTGGATTTGCAGGAAAAGGATCCTCAATATTACACTGATGGATTCATTCGAGGCATGATGCAAGGAATGCTATCAGCCGGTACAGACACATCAGCAGCAACAATGGAATGGGCACTCTCTCTACTCCTCAACAACCCACATTCCCTCCTCAAAGCCCAAGCAGAAATCGACACCCACGTGGGTCCAACCAGACTCCTGCAAGAATCCGACCTCACCAACCTCCCCTATCTCCGCGCCATCATCAAAGAGACGCTCCGCATCTACCCGGTCGCCCCACTGCTGGTTCCTCACGAGTCCTCGCAGGACTGCCTCGTCGGAGGCTTCCACGTGCCTCGCGGCACAATGTTGCTGGTCAACAACTGGGCCATCCAAAACGACTCCGGGTCGTGGCCGGATCCCGCGGAGTTTAGGCCGGAGAGATTTGCCGGGGATCAAGTTGAGGCGGCCGCGTGGCGGTGGCTGCCGTTTGGAGCCGGGCGGAGGGGCTGCCCCGGCGAGGGACTGGCGATGCGGATGGTGGGGCTGAGTTTGGGGTGTTTGATTCAGTGCTTTGAGTGGCGGAGAGTGGGGGAGGAGTTGGTGGATATGAGTGAAGGCGGTGGCCTCACCATGCCTAGACTGAAACCGTTGCTGGCGAAGTGCAGGCCACGACCGATTCTTCCCGATCTTCTGCCACCACTTTGA 1575 56.7 METPLHNYFFIFPTIFLLSYFLITHLLQIKNRCRRHLPPSPAAVSLPILGHLHLLKKPLHRTLAKLSAQHGPVLLLRFGSRPVLLVSSPSAAEECLAKNDVAFATRPRLSAGKHLGCNYTTILWAPYGPLWRDQRRIATLEIFSPTRIHMYGGVRAEEVKLLIRRLCEAQPETGDGFGVVEMKRAFFETVLNVMMRMIAGKRYCGEREGEAEEAERFREMVKEGFEVSGATNVGDFVPFLKWVGLWNGIEKRMERLQALRGGFMQNLIEERRRMRKNFSHCCADGDEKRCRVMVDVLLDLQEKDPQYYTDGFIRGMMQGMLSAGTDTSAATMEWALSLLLNNPHSLLKAQAEIDTHVGPTRLLQESDLTNLPYLRAIIKETLRIYPVAPLLVPHESSQDCLVGGFHVPRGTMLLVNNWAIQNDSGSWPDPAEFRPERFAGDQVEAAAWRWLPFGAGRRGCPGEGLAMRMVGLSLGCLIQCFEWRRVGEELVDMSEGGGLTMPRLKPLLAKCRPRPILPDLLPPL 524
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 40112853 40115002 + Maker00025401 Lcy13g2119 652424

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Lcy13g2119 524 FunFam Cytochrome P450 CYP81N5 30 513 - -
Lcy13g2119 524 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy13g2119 524 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy13g2119 524 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy13g2119 524 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy13g2119 524 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy13g2119 524 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy13g2119 524 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy13g2119 524 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy13g2119 524 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy13g2119 524 PANTHER CYTOCHROME P450 82C3-RELATED 19 514 IPR050651 -
Lcy13g2119 524 Gene3D Cytochrome P450 24 511 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy13g2119 524 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy13g2119 524 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy13g2119 524 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy13g2119 524 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy13g2119 524 SUPERFAMILY Cytochrome P450 38 514 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy13g2119 524 CDD CYP81 71 507 - -
Lcy13g2119 524 Pfam Cytochrome P450 42 505 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy13g2119 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy13g2119 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy13g2119 Lcy-Chr13:40112853 Lcy9g2057 Lcy-Chr9:45371539 3.85E-194 dispersed
Lcy9g1588 Lcy-Chr9:41093125 Lcy13g2119 Lcy-Chr13:40112853 2.26E-197 transposed
Lcy13g2119 Lcy-Chr13:40112853 Lcy9g2056 Lcy-Chr9:45366291 4.76E-183 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g686 . . . . . . . Bma01g02256 . . . Cma09g00271 . . . Cpe06g00187 . Bhi04g00395 . . . . . Lcy13g2119 . . . . . . . . . . . . Csa04g02459 . . . . . . . . . . . . Cmo09g00267 . . . . . . Bhi09g03252 . . . . Mch11g0343 . . . . . . . . . . Chy07g00173 .