Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy13g2125 ATGAAGAAGATGAAGTTGCAAACTTGCAGACTTTCGCTATGGTTTCTTCTGTTTTTGATTTCATTCTGTTTCTGCTCATTTTCTGTAGCACTAAAGAAGAATCAGCAGTTGAAGAAGAAGACTTACATAGTTCACATGGACAGAACCAACATGCCACTGGCCTTTGATGATCATTTCCAGTGGTATGATTCTTCTTTGAAGTCAGTTTCTGATTCAGCCCAAATGCTTTATTCCTACAACACAGTGGTTCATGGCTTCTCCACAAGATTGACTGTGGAGGAGGCTAAGTTGATTGAAAAGCAACTAGGAATTCTTGCTGTTGTACCTGAGGAGAAATATGAGCTCCATACCACTCGGACGCCTGAGTTTCTTGGACTCGGGAAGAGCGTCTCTTTCTTACCGGCGTCGGAGAAGGTTGGTGAGGTGATCATCGGGGTTCTTGACACTGGTGTGTGGCCTGAATTGGAGAGCTTCAATGATGCAGGGCTTGGACCAGTGCCTGCAAGCTGGAAAGGGGAGTGTGAAGTGGGTAAAAACTTCACCTCATCCAGTTGCAACAGGAAATTGATCGGAGCTAGATACTTTTCAAAGGGCTATGAGGCGGCATTTGGCCCAATTGACGAATCCCAGGAGTCGAAATCGCCAAGGGATGATGACGGTCATGGAACTCACACTTCGACAACTGCCGCTGGATCCGCTGTGACCGGAGCCAACCTCTTTGGCTATGCTGCAGGGACTGCAAGAGGAATGGCAGCTGAAGCTCGGGTTGCAACATACAAGGTATGTTGGCTTGGAGGGTGTTTCGGCTCTGACATTTTAGCTGCAATGGACAAGGCTGTTGGAGATGGTGTCAATGTTCTATCCTTGTCGCTTGGTGGATCATCCCCTGATTACTACAGAGACAATGTTGCCATTGGAGCCTTCTCTGCTGCGGCTCAGGGAGTTTTTGTGTCATGTTCAGCTGGGAATGGCGGCCCATCATCAGGTAGCTTGTCCAATGTTGCGCCGTGGATAACCACTGTTGGCGCCGGGACTCTGGACAGAGACTTTCCGGCATATGTTACTCTTGGCAATGGGAAGAAGTTCACAGGGGAGTCGCTCTACAGTGGAAAGCCCTTGCCGGACTCTCTAATACCAATTGTATATGCCGGCAATGCGAGTAATTCAACCAGTGGTAGCCTTTGCTTGACCAGTACTCTGATTCCGGCGAAGGTGGCCGGAAAAATAGTCGTATGTGACAGAGGAGGGAACTCTCGAGTTCAGAAAGGGGTGGTGGTGAAAGAGGCCGGTGGCGCAGGAATGATTCTGGCCAACACTGAAACATACGGGGAGGAACAATTAGCCGATGCACATCTCTTGCCGGCGGCGGCGGTTGGCCAGAAAGCCGGCGACGCAATAAAGAGCTACATCTCCTCGGACGCGAATCCGACAGCAACAATCAGCACCGGCACCACAAGATTGGGAGTTCAGCCATCGCCAGTGGTGGCCGCATTCAGTTCTCGAGGCCCTAATTTTCTCACTCCACAGATTCTCAAACCCGATCTGATAGCCCCGGGAGTGAACATTCTAGCCGGATGGACCGGCGGCGCCGGCCCAACTGGTTCAGAAGACGATAAGCGGCGCGTGCCCTTCAACATCATCTCCGGCACATCCATGTCGTGCCCTCACATCAGTGGATTAGCCGCTCTTCTGAAAGCCGCCCATCCAGATTGGAGTCCAGCCGCCATTAGATCTGCCCTAATGACCACATCGTACTCAACATACAAAAGTGGCGAAGCAATTCAAGACATATCCAATGGATTAGCGTCCACGCCGTTCGATATCGGAGCCGGACATGTGAATCCAACGGCCGCCCTCGATCCCGGCCTCGTTTACGATACCACCACCGACGACTACTTCGCCTTTCTCTGCGCCCTAAACTACAGCTCACTTCAAATCAAAGTAATCGCCAAGAAAGACTTCACCTGCAGTGCGAACAAGAACTACAGATTGGAGGATCTGAACTACCCATCTTTTGCAGTTCCATTGGAGACCCCTTCCACCAGAGGAGGCGGAGACGCCGCACCGACCACCGTAAAATATACAAGGACTCTAACCAACAAGGGCGCCTCATCGACGTATAAGGCCACAGTGACGTCGAAAAGTCCGTCGGTGAAGATTGTGGTTGAGCCGGAATCTCTGAGCTTTGCAGAGGCAAATGAGCAGAAGAGTTACACAGTGACTTTCATTGCTTTTCCAATGCCGTCGGGGACGGTGAGCTTTGCTCGTCTGGAATGGTCGGATGGAAAACACGTTGTGGGTAGCCCCATTGCTTTCACCTGGACTTAG 2328 50.99 MKKMKLQTCRLSLWFLLFLISFCFCSFSVALKKNQQLKKKTYIVHMDRTNMPLAFDDHFQWYDSSLKSVSDSAQMLYSYNTVVHGFSTRLTVEEAKLIEKQLGILAVVPEEKYELHTTRTPEFLGLGKSVSFLPASEKVGEVIIGVLDTGVWPELESFNDAGLGPVPASWKGECEVGKNFTSSSCNRKLIGARYFSKGYEAAFGPIDESQESKSPRDDDGHGTHTSTTAAGSAVTGANLFGYAAGTARGMAAEARVATYKVCWLGGCFGSDILAAMDKAVGDGVNVLSLSLGGSSPDYYRDNVAIGAFSAAAQGVFVSCSAGNGGPSSGSLSNVAPWITTVGAGTLDRDFPAYVTLGNGKKFTGESLYSGKPLPDSLIPIVYAGNASNSTSGSLCLTSTLIPAKVAGKIVVCDRGGNSRVQKGVVVKEAGGAGMILANTETYGEEQLADAHLLPAAAVGQKAGDAIKSYISSDANPTATISTGTTRLGVQPSPVVAAFSSRGPNFLTPQILKPDLIAPGVNILAGWTGGAGPTGSEDDKRRVPFNIISGTSMSCPHISGLAALLKAAHPDWSPAAIRSALMTTSYSTYKSGEAIQDISNGLASTPFDIGAGHVNPTAALDPGLVYDTTTDDYFAFLCALNYSSLQIKVIAKKDFTCSANKNYRLEDLNYPSFAVPLETPSTRGGGDAAPTTVKYTRTLTNKGASSTYKATVTSKSPSVKIVVEPESLSFAEANEQKSYTVTFIAFPMPSGTVSFARLEWSDGKHVVGSPIAFTWT 775
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
13 40144800 40147127 - Maker00025357 Lcy13g2125 652430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy13g2125 775 CDD Peptidases_S8_3 113 585 IPR034197 -
Lcy13g2125 775 Gene3D Peptidase S8/S53 domain 142 632 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lcy13g2125 775 Pfam Subtilase family 141 587 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lcy13g2125 775 ProSitePatterns Serine proteases, subtilase family, serine active site. 549 559 IPR023828 -
Lcy13g2125 775 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 25 116 IPR037045 -
Lcy13g2125 775 Gene3D - 347 487 - -
Lcy13g2125 775 FunFam subtilisin-like protease SBT1.5 347 487 - -
Lcy13g2125 775 Pfam Fibronectin type-III domain 666 771 IPR041469 -
Lcy13g2125 775 Pfam PA domain 393 466 IPR003137 -
Lcy13g2125 775 SUPERFAMILY PA domain 400 472 IPR046450 -
Lcy13g2125 775 SUPERFAMILY Subtilisin-like 115 623 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lcy13g2125 775 Gene3D - 636 774 - -
Lcy13g2125 775 FunFam Subtilisin-like protease SBT1.9 30 116 - -
Lcy13g2125 775 CDD PA_subtilisin_like 353 480 - -
Lcy13g2125 775 ProSiteProfiles Serine proteases, subtilase domain profile. 112 619 - -
Lcy13g2125 775 MobiDBLite consensus disorder prediction 206 229 - -
Lcy13g2125 775 PRINTS Subtilisin serine protease family (S8) signature 548 564 IPR015500 -
Lcy13g2125 775 PRINTS Subtilisin serine protease family (S8) signature 139 158 IPR015500 -
Lcy13g2125 775 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Lcy13g2125 775 Pfam Peptidase inhibitor I9 41 116 IPR010259 -
Lcy13g2125 775 FunFam Subtilisin-like protease SBT1.5 141 359 - -
Lcy13g2125 775 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 41 770 IPR045051 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy13g2125 Lcy-Chr13:40144800 Lcy6g0219 Lcy-Chr6:2004756 8.25E-273 dispersed
Lcy9g0548 Lcy-Chr9:17151572 Lcy13g2125 Lcy-Chr13:40144800 1.43E-100 dispersed
Lcy1g0936 Lcy-Chr1:8169958 Lcy13g2125 Lcy-Chr13:40144800 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy13g2125 - - - 0.0