Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy13g2183 | ATGTTGAAGCTATCCTTCTCGTCCCACCGCATTTTCATCTTCATCCTTGTCCTTTTACTCTTCTCTACGCCGCTGCTTCCTTCCACCGCCGTCCCCCTCTCCGACTCGGATCAGCCGGTTCTCGCCAACGCCACCCTCCAGTCCAACAACGTGTCCAGTCCCAGGAATAAGGAGGGTAGTTTTGCTGACATCATTGATCGGGCTTTGGAGAATGAGTTCAAGGAGAATGATCAGAACGAAGCAGATTGCGGTTCTAATGCGGAATCCGAGTTAATTGTGGGATGCGGCGATGTTGTAACGATTTTGGTTTGGAATTTGTCAGACATTTCTCTCTTTTGCATTTCAGCAATTGATGCAGGAAGCTTCAACAACAGCGTAGCAGAGCAGCAGGCAGTTCTGGAGACTGTGGCAAGGGTAAAGTCAAAGAAAAATGATACGAAAGAGGAAAAGTTTCAGCTTCAAAATGTTTTCAATTTGGACAATGATAATAGAGCTGAAGATACTCCCACATTGATTGATCGAAAGGACAACGTTTTTATCATATCTAACTTTAAATCCAAATATCCAGTGCTGCAGCTAGACTTAAGATTGATCTCAGATTTGGTCATCGTTATTGTCTCTGCAACTTGTGGTGGCATTGCCTTTGCCTGTGCTGGACAACCAGTTATAACTGGATACCTTCTAGCAGGATCTATTATTGGACCTGGAGGATTTAACTTTGTCAGTGAAATGGTGCAGGTACGTTGCTCTTGA | 753 | 44.49 | MLKLSFSSHRIFIFILVLLLFSTPLLPSTAVPLSDSDQPVLANATLQSNNVSSPRNKEGSFADIIDRALENEFKENDQNEADCGSNAESELIVGCGDVVTILVWNLSDISLFCISAIDAGSFNNSVAEQQAVLETVARVKSKKNDTKEEKFQLQNVFNLDNDNRAEDTPTLIDRKDNVFIISNFKSKYPVLQLDLRLISDLVIVIVSATCGGIAFACAGQPVITGYLLAGSIIGPGGFNFVSEMVQVRCS | 250 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 13 | 40764399 | 40766446 | - | Maker00025174 | Lcy13g2183 | 652488 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy13g2183 | 250 | PANTHER | POTASSIUM/PROTON ANTIPORTER-RELATED | 34 | 248 | IPR045158 | GO:0015386(InterPro)|GO:0071805(InterPro)|GO:1902600(InterPro) | |
| Lcy13g2183 | 250 | Gene3D | - | 195 | 248 | IPR038770 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy13g2183 | Lcy-Chr13:40764399 | Lcy6g0227 | Lcy-Chr6:2049188 | 1.01E-48 | dispersed | |
| Lcy13g2183 | Lcy-Chr13:40764399 | Lcy2g0907 | Lcy-Chr2:8317292 | 5.38E-71 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lcy13g2183 | K26735 | - | csv:101217282 | 342.043 |