Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy1g0084 ATGGAGATTATTCACTGTGCACGTCTACTGTGTGTTGTTTTCTGTTTTGGGATGTTTCTATGCGCATCTTGTCTGGATGAATTTGGAGATTCAACAGCTGTGTACATTGTAACTCTCAAGGAACCTCCTTCCACTACTCATTATTATGGTCAGCTTAGACAGAATACTACTTCAACTTCTAGTGGATTAAGCATCCACAAACCGAGAAAAATATCAAGAAAACATCGAAGATATAGGTCTTACATAGCTCGAGTTCATGATTCATTGTTGAACAAGGTCTTGAAGGGGGAGAAATATCTAAAGCTGTACAGTTACCATTTCTTGATCAATGGATTTGCTGTGCTAGTTACCGAAGAACAGGCAAGTAAACTTTCAAAGAGGAGAGAGGTCGCAAATGTTGTCATGGATTTCTCTGTTAGAACTGCTACGACCCATACTCCGCAGTTCTTGGGCCTACCGCAGGGAGCTTGGTCTCAAGATGGTGGCTATGAATCTGCTGGGACTGGGATTGTGATAGGGTTCATTGACACTGGCATTGACCCTGCACACCCCAGCTTTGCTGATGATTTGACTGATAATCCTTTTCCCATTCCGGCCCACTTCTCTGGAATCTGTGAGGTAACTCCAGATTTTCCATCTGGGTCATGCAATCGGAAGCTTGTAGGAGCGCGCCATTTTGCAGCCTCAGCTATAACAAGGGGAATATTTAATGCATCTCAGGATTATGCATCACCATTTGATGGTGATGGACATGGCACGCACACTGCTTCAATAGCTGCTGGAAACCATGGCATTCCAGTGCTAGTTGCCGGACATCACTTTGGAAACGCGAGTGGGATGGCTCCTCGTTCACACATTGCTGTTTACAAGGCACTATACAAAAGCTTTGGAGGTTTTGCTGCTGATGTTGTTGCTGCAGTTGATCAGGCTGCTCAGGATGGGGTGGATATTATAAGTCTATCAATCACACCGAATAGGCGTCCCCCTGGTATTGCAACATTTTTTAATCCCATAGACATGGCACTGCTCTCTGCAGTAAAGGCAGGTATATTTGTTGTGCAAGCAGCTGGCAATACTGGACCAGCACCAAAGAGCATGTCATCCTTCAGTCCCTGGATCTTTACTGTTGGTGCTGCTTCTCATGATAGAAGCTATGCTAACTCTATAACCCTTGGCAATAATGTCACCATCCCAGGGGTTGGACTTGCACCTGGAACTTATAATGACACAAAGTACAAACTAATTGCTGCAATACATGCATTGAACAATGACACAAATGTTTCGGAGGACATGTACGTGGGTGAATGCCAAGACTCCAGTAACTTTGATCGGGATCTGATTGAAGGGAACCTTTTAATATGCAGCTACTCTATCAGATTTGTGCTCGGGCTTTCCACGGTTAAACAGGCTTTACAGACAGCAAAAAACTTGAGTGCTGCTGGTGTCATTTTCTATATGGATTCTTTTGTGATAGGTTTTCGGCTTAACCCAATTCCAATGAAAATGCCTGGCATCATAATTTCATCACCAGAAGATTCCAAGATGCTTCTTCAATACTACAATTCTTCTTTGGAAGTAGATGGATTAACAAAGAAAATTTCTAAATTTGGAGCTGTTGCTAGCATATCTGGAGGATTAAAGGCAAATTATAGCTCCACTGCCCCACAAATTATGTATTACTCTGCTAGAGGACCAGATCCAGAAGACAGTTCTCTTGATGATTCTGATATTATGAAGCCCAACTTGGTAGCTCCTGGCAATTTCATATGGGCTGCCTGGAGCTCTGTTGCCACCGACTCTGTCGAATTTCTCGGTGAAAACTTCGCAATGATGTCGGGAACAAGCATGGCTGCTCCTCATATTGCTGGCCTAGCCTCACTCATAAAGCAGAAGTACCCTAGTCTTAGTCCTTCAGCCATCGCATCTGCACTATCCACAACTGCTTCTCTTTACGATAAGACTGGTGGACCAATCATGGCTCAGCGTGCTTACGCTAACCCCGAACAGAACCAGTCTCCAGCTACGCCTTTTGATATGGGAAGTGGTTTTGTGAATGCAACTGCAGCTCTCAACCCAGGGTTGATCTTTGATTCCAGTTACGATGATTATATGTCGTTTCTTTGCGGTATCAACGGATCATCTCCTGTGGTCTTCAACTACACAGGCCAGAACTGCGGGCTTTACAATTCTAGCATCAGTGGAGCTGATCTGAACTTGCCCTCTGTCACGATAGCGAAACTTAACCAGTCGAGAGTAGTGCAACGAACCGTGATCAACATTGCTGGACCTGAGTTTTATAGTGTTGGTTGGAGTGCTCCTTATGGGATTTCTTTGAAGGTTTCTCCGACTCGATTTACAATCGGCAGTGGCGAGAAACAACAGTTGACGATATTCTTCAATGCAACGATGAACAGCTCGACTGCTAGCTTTGGTAGAATTGGACTTTTTGGGAATGCAGGCCATATTATCAACATTCCTCTTTCAGTAATTTTGAAGATCTCATATAACAATACCACTAATTGA 2523 43.92 MEIIHCARLLCVVFCFGMFLCASCLDEFGDSTAVYIVTLKEPPSTTHYYGQLRQNTTSTSSGLSIHKPRKISRKHRRYRSYIARVHDSLLNKVLKGEKYLKLYSYHFLINGFAVLVTEEQASKLSKRREVANVVMDFSVRTATTHTPQFLGLPQGAWSQDGGYESAGTGIVIGFIDTGIDPAHPSFADDLTDNPFPIPAHFSGICEVTPDFPSGSCNRKLVGARHFAASAITRGIFNASQDYASPFDGDGHGTHTASIAAGNHGIPVLVAGHHFGNASGMAPRSHIAVYKALYKSFGGFAADVVAAVDQAAQDGVDIISLSITPNRRPPGIATFFNPIDMALLSAVKAGIFVVQAAGNTGPAPKSMSSFSPWIFTVGAASHDRSYANSITLGNNVTIPGVGLAPGTYNDTKYKLIAAIHALNNDTNVSEDMYVGECQDSSNFDRDLIEGNLLICSYSIRFVLGLSTVKQALQTAKNLSAAGVIFYMDSFVIGFRLNPIPMKMPGIIISSPEDSKMLLQYYNSSLEVDGLTKKISKFGAVASISGGLKANYSSTAPQIMYYSARGPDPEDSSLDDSDIMKPNLVAPGNFIWAAWSSVATDSVEFLGENFAMMSGTSMAAPHIAGLASLIKQKYPSLSPSAIASALSTTASLYDKTGGPIMAQRAYANPEQNQSPATPFDMGSGFVNATAALNPGLIFDSSYDDYMSFLCGINGSSPVVFNYTGQNCGLYNSSISGADLNLPSVTIAKLNQSRVVQRTVINIAGPEFYSVGWSAPYGISLKVSPTRFTIGSGEKQQLTIFFNATMNSSTASFGRIGLFGNAGHIINIPLSVILKISYNNTTN 840
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 759801 766543 - Maker00011673 Lcy1g0084 621996
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy1g0084 840 CDD Peptidases_S8_3 142 649 IPR034197 -
Lcy1g0084 840 CDD PA_subtilisin_like 388 523 - -
Lcy1g0084 840 Pfam Subtilase family 167 662 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lcy1g0084 840 PRINTS Subtilisin serine protease family (S8) signature 612 628 IPR015500 -
Lcy1g0084 840 PRINTS Subtilisin serine protease family (S8) signature 167 186 IPR015500 -
Lcy1g0084 840 PRINTS Subtilisin serine protease family (S8) signature 247 260 IPR015500 -
Lcy1g0084 840 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 90 794 IPR045051 -
Lcy1g0084 840 ProSitePatterns Serine proteases, subtilase family, serine active site. 613 623 IPR023828 -
Lcy1g0084 840 Gene3D - 707 831 - -
Lcy1g0084 840 Gene3D - 382 550 - -
Lcy1g0084 840 ProSiteProfiles Serine proteases, subtilase domain profile. 147 690 - -
Lcy1g0084 840 Pfam Peptidase inhibitor I9 34 141 IPR010259 -
Lcy1g0084 840 Gene3D Peptidase S8/S53 domain 169 703 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lcy1g0084 840 Pfam Fibronectin type-III domain 736 829 IPR041469 -
Lcy1g0084 840 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 172 183 IPR023827 -
Lcy1g0084 840 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 140 IPR037045 -
Lcy1g0084 840 SUPERFAMILY Subtilisin-like 142 694 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lcy1g0084 840 FunFam Subtilisin-like protease SBT1.5 169 395 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy1g0084 Lcy-Chr1:759801 Lcy4g1615 Lcy-Chr4:40919563 1.07E-224 dispersed
Lcy1g0084 Lcy-Chr1:759801 Lcy9g0103 Lcy-Chr9:2228919 3.29E-91 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy1g0084 - - - 0.0