Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy1g0094 ATGGTCGGAGGCTTTGAAGTCGGAGCTGTCCCCTACAACCCAGACGGTTGGGGTCCGCCGGACTCCACCGCCACTCTCGCCGCTTCCTCCAATCTCCCTCTCAATGTCCCCTTTGCTCCATTCTCTCGCTCCGATAAGCTTGGTCGGATCGCCGATTGGACACGAACGATGAATAACCCTGGTCGCCCCAAGACTGCTTCGGATTCCGTCTTCGATTTCACCAACGACGATTCCTTCCCGGCCAATGCCGACGAGGACATGTCCTTCCGTTTGGTTGATGGAAAGCCTCCTCCTCGCCCCAAATTTGGCCCCAAATGGCGATTCAACCAGCAGAGGACGCAGCTGCCTCAGCGCCGTGACGAAGAAGTTGAGGCTCGAAAGCGCGAGGCTGAGAAGGAGCGGGCTCGCCGTGACCGCCTCTACAACCTCAACAGGTCTAATGTCAATGCCCCCCGTCGTGAAGCTGCTGTTTTCAAATCCTCTGTGGAAATTCAACCGGAATGGAACATGCTTGATCAGATTCCCTTCTCCACCTTTTCGAAGCTGTCCTTCTCTGTTCCTGAGCCCGAAGACCTTCTTCTGTGCGGCGGCCTAGAGTTCTACGATCGAGCATACGACCGTATCACTCCCAAGAACGAGCGCCGTCTTGAGCGCTTCAAGAACCGCAACTTCTTCAAGGTAACTACTACTGATGACCCTGTCATTCGTCGTCTCGCAAATGAGGATAAAGCCACAGTTTTTGCTACTGATGCCATCCTTTCTACGCTCATGTGTGCTACGAGATCGGTTTATTCCTGGGATATTGTGGTTCAGCGTGTTGGGAACAAGCTTTTCTTTGATAAGAGGGATGGATCGCAACTTGATTTGCTTGCCGTCCACGAGACCTCTCAGGAACCCCTACCAGAGGCAAAGGATGATATTAATTCAGCTTACTCACTGAGCGTTGAAGCCGCTTACATTAATCAAAACTTCTCGCAACAAGTTTTAGTTAGGGACGGAAATAAGGTGGCTTTTGACGAGCCAAACCCATTTGCAAATGAGGGCGAGGAGGTCGCTTCGGTGGCTTATAGGTATAGGAGGTGGAAGCTCGATGATGACATGTATCTTGTAGCGAGGTGTGAGGTTCAAAGTGTTATGGAGGTTAATAAGCAGAGATCATTCTTGACTTTGAATGCTCTTAATGAATTTGATCCCAAGTATTCTGGTGTTGATTGGAGGCAGAAATTGGAGACACAGAGGGGTGCTGTTTTGGCTACTGAGTTGAAGAACAATGCTAACAAATTGGCAAAATGGACAGCTCAGGCCCTGTTGGCTAGCGCAGATATGATGAAGTTGGGTTATGTCTCTAGGGTTCATCCTCGTGATCACTTTAACCATGTCATCCTAGCTGTGGTTGGATATAAACCTAAGGATTTTGCAACTCAAATTAACTTGAATACGTCTAACATGTGGGGTATTGTCAAATCAATCGTGGATTTGTGCATGAAATTGAATGAAGGTAAGTATGTTTTGGTTAAGGACCCATCGAAACCACAGGTTAGGATCTATGAGGTTCCTGCTGATGCATTTGAGAATGATTATGTTGAGGAGCCACTGGCTGAGGAGGACCAAGTGCAACCACCAGGAGAAGATGAAAATGGTGCCACTGCTAATGCGGGGACAGATGATGCCGAAGAGAAAGCTGATGCTGCTCAAGCTTAA 1701 48.97 MVGGFEVGAVPYNPDGWGPPDSTATLAASSNLPLNVPFAPFSRSDKLGRIADWTRTMNNPGRPKTASDSVFDFTNDDSFPANADEDMSFRLVDGKPPPRPKFGPKWRFNQQRTQLPQRRDEEVEARKREAEKERARRDRLYNLNRSNVNAPRREAAVFKSSVEIQPEWNMLDQIPFSTFSKLSFSVPEPEDLLLCGGLEFYDRAYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDAILSTLMCATRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLAVHETSQEPLPEAKDDINSAYSLSVEAAYINQNFSQQVLVRDGNKVAFDEPNPFANEGEEVASVAYRYRRWKLDDDMYLVARCEVQSVMEVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRVHPRDHFNHVILAVVGYKPKDFATQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLAEEDQVQPPGEDENGATANAGTDDAEEKADAAQA 566
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 855171 857494 - Maker00011731 Lcy1g0094 622006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy1g0094 566 PIRSF Transl_init_eIF3d 1 547 IPR007783 GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro)
Lcy1g0094 566 MobiDBLite consensus disorder prediction 114 134 - -
Lcy1g0094 566 MobiDBLite consensus disorder prediction 526 541 - -
Lcy1g0094 566 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 5 517 IPR007783 GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro)
Lcy1g0094 566 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 4 540 IPR007783 GO:0003743(InterPro)|GO:0003743(PANTHER)|GO:0005737(InterPro)|GO:0005852(InterPro)|GO:0005852(PANTHER)|GO:0006413(PANTHER)
Lcy1g0094 566 MobiDBLite consensus disorder prediction 526 566 - -
Lcy1g0094 566 Coils Coil 118 138 - -
Lcy1g0094 566 MobiDBLite consensus disorder prediction 88 134 - -
Lcy1g0094 566 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 3 529 IPR007783 GO:0003743(InterPro)|GO:0005737(InterPro)|GO:0005852(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy1g0094 K03251 - csv:101208923 1077.77