Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy1g0114 | ATGCTCCCCAAAGAAGCAAAGGAAGAAGATAACAGAAAGAATGACAACAACAATGACGACGATGGAGATGAATGTGAGGAGGATTTGGAAGATGAGGGAGGTTCGACGCAAATAAAACGACGAGGGGTTATCTATGGATCTCATTTAGTACAAGGAAAAATGGATCATGGAATGGAGGACTATATCGTTGCCGAAGAACGATATGTCGATGACCACAAGCTAGGACTATTTGCAATTTTCGATGGCCACTCCGGTCGCGATGTTGCAGAGTACTTGCAGAGCCATCTGTTTGATAACATATTGAGCCAGTCTGGTTTCTGGGAAGACCCTGAAGAAGCAATCAGGAGAGCATATAAAGAAATAGATGATGAGATTTTGGCTAGAAAAGTGAGAAAGAGAGGAGGTTCCACAGCAGTCACTGCTATACTAATTGATGGACAGAAGCTAATTGTCGCAAACGTTGGCGACTCACGAGCAGTGATACGCAGAAATGGCTTGGCAAAACCGATTACAGTCGATCACGAACCAGAGAAGGAGAAGGAACTTGTCGAGAGCCGAGGCGGATTTGTTGTACAAATGCCAGGAAGTGTGCCACGGGTGGATGGTCAGCTAGCAGTGTCGAGAGCATTTGGAGATGCAAAGCTCAAAGAACACATCACTTCAGAACCAGATATCAGGATCCTGACAATTGACAATGAGACTGAATTCACCATTTTGGCCAGTGATGGCCTCTGGAAGGTGATGTCAAACCAGGAAGCTTGTGATTGCATCAAAGAAATGGCTATGGATGCTCAAAAGGCGTCAGAGGAGTTGATCAAAGAGGCACTGTCTAGGGAGAGCTACGATGACATCTCCTGCATTGTTGTTACCTTCCACTGA | 879 | 45.39 | MLPKEAKEEDNRKNDNNNDDDGDECEEDLEDEGGSTQIKRRGVIYGSHLVQGKMDHGMEDYIVAEERYVDDHKLGLFAIFDGHSGRDVAEYLQSHLFDNILSQSGFWEDPEEAIRRAYKEIDDEILARKVRKRGGSTAVTAILIDGQKLIVANVGDSRAVIRRNGLAKPITVDHEPEKEKELVESRGGFVVQMPGSVPRVDGQLAVSRAFGDAKLKEHITSEPDIRILTIDNETEFTILASDGLWKVMSNQEACDCIKEMAMDAQKASEELIKEALSRESYDDISCIVVTFH | 292 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 986786 | 988636 | + | Maker00011908 | Lcy1g0114 | 622026 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy1g0114 | 292 | SMART | PP2C_4 | 34 | 289 | IPR001932 | - | |
Lcy1g0114 | 292 | MobiDBLite | consensus disorder prediction | 1 | 37 | - | - | |
Lcy1g0114 | 292 | CDD | PP2Cc | 43 | 291 | IPR001932 | - | |
Lcy1g0114 | 292 | ProSiteProfiles | PPM-type phosphatase domain profile. | 44 | 291 | IPR001932 | - | |
Lcy1g0114 | 292 | Gene3D | - | 23 | 292 | IPR036457 | - | |
Lcy1g0114 | 292 | SMART | PP2C_SIG_2 | 49 | 291 | IPR001932 | - | |
Lcy1g0114 | 292 | FunFam | Probable protein phosphatase 2C 39 | 35 | 292 | - | - | |
Lcy1g0114 | 292 | Pfam | Protein phosphatase 2C | 54 | 284 | IPR001932 | - | |
Lcy1g0114 | 292 | PANTHER | PROTEIN PHOSPHATASE | 21 | 289 | IPR015655 | GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Lcy1g0114 | 292 | MobiDBLite | consensus disorder prediction | 1 | 19 | - | - | |
Lcy1g0114 | 292 | SUPERFAMILY | PP2C-like | 42 | 292 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy13g0387 | Lcy-Chr13:4414263 | Lcy1g0114 | Lcy-Chr1:986786 | 4.60E-27 | dispersed | |
Lcy1g0114 | Lcy-Chr1:986786 | Lcy9g1311 | Lcy-Chr9:37855499 | 3.67E-100 | dispersed | |
Lcy1g0114 | Lcy-Chr1:986786 | Lcy4g0673 | Lcy-Chr4:8138087 | 8.88E-110 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy1g0114 | K14803 | - | csv:101211141 | 458.759 |