Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy1g0235 | ATGAAGAAATCTACTTTCTTTTGCCTTCTTCTGCTGCTGCTCCTCCCTCTAATTCAACAAGCCTCTTCTTCTTCCCAGGCTTACATTGTGTACTTTGGAGAGCACCATGGAGGCAAAGCATGGGAGGAGATTGAAGAAATCCACCATTCATATTTGGTGTCTGTAAAAGAAACTGAAGAAGATGCAAAATCCTCTCTTCTTTACAGCTACAAGCGCACCATCAATGGCTTTGCAGCTCTTCTTACTGAACAAGAAGCCTCCAAACTTTCAGAATTGGAGGAAGTGGTGAGTGTGATTCAGAGTAAAAAATACAGCATGCACACCACAAGGTCATGGGAGTTTTCTGGGGTTGAAGAAGACAAGCCCAGAATTAATGACTTGGTTTCTAGAGCTAACTATGGAAAAGATGTTGTCATTGGAATGCTTGACAGTGGTAATTTTTTACAGAAGATAATTGGAGCTAGATATTACCTAAAGGGATATGAGCATCACTTCGGGCGTTTAAATGAAACGATTGACTACCGATCACCGTGCGACAAGGACGGCCACGGATCACACACAGCTTCCATTGCCGGCGGCCGGAGGGTCTACAACGTCTCAGCCTTAGGCGGCGTCGCTCGAGGCACGGCCTCCGGCGGGGCCCCGGGGGTCCGGCTGGCAATTTACAAAGTTTGTTGGGCAATTCCCAACCAAATGAAAATTCTGGGAAACGTTTGCTTCGACACCGACATGTTGGCCGCCATGGACGACGCCATTGCCGACGGCGTCGACGTTCTGAGCCTCTCCATCGGAAAATCGGATCCGTACAATTACACCGATGACGGAATCGCCATCGGAGCTCTGCACGCCGTTAAAAGGGACATTGTGGTGTCTTGTAGCGCCGGAAATTACGGCCCTACGCCGTCGGCGTTGTCGAATATTGCACCGTGGATCATCACCGTCGGAGCTAGCACCGTGGATCGGGAATTTTACTCTCCAGCCATTCTCGGAAATGGCTTGAAGATTAAGGGATTGTCGGTGGCTCCGTCGAAGTTGGAGATGAAGAAGATGTACCCTTTAGTGTATGCTAGAGATATAGAAATGCCACATGTACCCCAAAACGAATCCGGTCTATGTGTTGCAGGCTCGCTTTCACACGATAAAGCCAGAGGAAAAATAGTGCTGTGCTTTAGAGGAGAAGGAATCAGCAGATACGCCGGCAGCCTGGAAGTGAAAAGGTCCGGCGGCGCCGGAATGATAATCGGAAACGTGCCGGCGGTGGGACGGAGGCTGCACGCTGATCCCCATTTTGTTCCGGCCACCGCCGTGTCTTACGAAGATGCAAATATGATCCTCAAATATATAAAATCTCACGCAAATCCAACGGCAACAATTGTTCCACCCATCACCATCTATGGCTCTAGGCCGGCGCCGGCCATGGCCAACTTTTCAAGTAGAGGTCCAAACCTCATCGATCCTCATTTTCTTAAGCCGGACATAACAGCACCAGGAGTGGACATTCTAGCAGCATGGTCAGAGGAAGATTCCCCAACAAAACTACCAAAATTCTTGGACCCTCGTATCGTCAAATACAATCTCTACTCCGGCACTTCCATGTCCTGTCCCCACGTCTCCGCCGCCGCCGCCCTCCTCCGCGCCATCCACCCCACCTGGTCCCAAGCCGCCATCCGCTCCGCCCTCATGACCACCGCCACCACCACCAACAAATCCGGCCACCCCATCACCGACGACTCCACCGCCGACAACTCCCCCGCCACCCCTTTCTCCTTCGGCTCCGGCCACTTCCGCCCCTCCAAGGCGGCCGACCCCGGCCTTGTCTACGACTCCAATTACACCGACTATCTCCACTACCTGTGCGGCCTCAAAATGAACTCCATCGACCCTTCCTTCAAGTGCCCCCCACGTGCCCTCCTACCCCACGACCTCAATTACCCTTCCATCGCCGTCCCCAAGCTGAGAGGCGCCGTGAGGATCAAAAGGACGGTGACCAACGTGGGCGGCGGAGGTAAAAGTGTTTACTTTTTTCACAGCCAGGCGCCGCCGGGTGTGGCGGTGAGGGCGGATCCGAATGTTTTGTACTTCGACAGAGTTGGGCAGAGGAAAAGTTTTACGATCACGGTGAGTGGGAAGGTGAAGGGCGGGGTTGATGGAAGTGGATACTCTTTTGGTTGGTTTGCTTGGAGCGATGGGATTCACTATGTTAGAAGCCCAATTGCAATTTCTTCAACTTAA | 2232 | 52.15 | MKKSTFFCLLLLLLLPLIQQASSSSQAYIVYFGEHHGGKAWEEIEEIHHSYLVSVKETEEDAKSSLLYSYKRTINGFAALLTEQEASKLSELEEVVSVIQSKKYSMHTTRSWEFSGVEEDKPRINDLVSRANYGKDVVIGMLDSGNFLQKIIGARYYLKGYEHHFGRLNETIDYRSPCDKDGHGSHTASIAGGRRVYNVSALGGVARGTASGGAPGVRLAIYKVCWAIPNQMKILGNVCFDTDMLAAMDDAIADGVDVLSLSIGKSDPYNYTDDGIAIGALHAVKRDIVVSCSAGNYGPTPSALSNIAPWIITVGASTVDREFYSPAILGNGLKIKGLSVAPSKLEMKKMYPLVYARDIEMPHVPQNESGLCVAGSLSHDKARGKIVLCFRGEGISRYAGSLEVKRSGGAGMIIGNVPAVGRRLHADPHFVPATAVSYEDANMILKYIKSHANPTATIVPPITIYGSRPAPAMANFSSRGPNLIDPHFLKPDITAPGVDILAAWSEEDSPTKLPKFLDPRIVKYNLYSGTSMSCPHVSAAAALLRAIHPTWSQAAIRSALMTTATTTNKSGHPITDDSTADNSPATPFSFGSGHFRPSKAADPGLVYDSNYTDYLHYLCGLKMNSIDPSFKCPPRALLPHDLNYPSIAVPKLRGAVRIKRTVTNVGGGGKSVYFFHSQAPPGVAVRADPNVLYFDRVGQRKSFTITVSGKVKGGVDGSGYSFGWFAWSDGIHYVRSPIAISST | 743 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 2117886 | 2126328 | - | Maker00011669 | Lcy1g0235 | 622147 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy1g0235 | 743 | SUPERFAMILY | Subtilisin-like | 107 | 605 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Lcy1g0235 | 743 | MobiDBLite | consensus disorder prediction | 566 | 585 | - | - | |
Lcy1g0235 | 743 | Pfam | Fibronectin type-III domain | 641 | 740 | IPR041469 | - | |
Lcy1g0235 | 743 | Pfam | Subtilase family | 134 | 593 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Lcy1g0235 | 743 | Gene3D | Peptidase S8/S53 domain | 147 | 614 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Lcy1g0235 | 743 | Gene3D | - | 320 | 465 | - | - | |
Lcy1g0235 | 743 | CDD | PA_subtilisin_like | 328 | 458 | - | - | |
Lcy1g0235 | 743 | CDD | Peptidases_S8_3 | 104 | 565 | IPR034197 | - | |
Lcy1g0235 | 743 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 17 | 107 | IPR037045 | - | |
Lcy1g0235 | 743 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 28 | 145 | IPR045051 | - | |
Lcy1g0235 | 743 | Gene3D | - | 618 | 743 | - | - | |
Lcy1g0235 | 743 | PRINTS | Subtilisin serine protease family (S8) signature | 134 | 153 | IPR015500 | - | |
Lcy1g0235 | 743 | PRINTS | Subtilisin serine protease family (S8) signature | 179 | 192 | IPR015500 | - | |
Lcy1g0235 | 743 | PRINTS | Subtilisin serine protease family (S8) signature | 528 | 544 | IPR015500 | - | |
Lcy1g0235 | 743 | Pfam | Peptidase inhibitor I9 | 28 | 107 | IPR010259 | - | |
Lcy1g0235 | 743 | FunFam | subtilisin-like protease SBT1.5 | 320 | 465 | - | - | |
Lcy1g0235 | 743 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 111 | 601 | - | - | |
Lcy1g0235 | 743 | FunFam | Subtilisin-like protease SBT5.3 | 17 | 107 | - | - | |
Lcy1g0235 | 743 | Pfam | PA domain | 351 | 443 | IPR003137 | - | |
Lcy1g0235 | 743 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 529 | 539 | IPR023828 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy1g0235 | Lcy-Chr1:2117886 | Lcy4g0408 | Lcy-Chr4:4986760 | 1.21E-184 | dispersed | |
Lcy1g0235 | Lcy-Chr1:2117886 | Lcy6g1880 | Lcy-Chr6:39409989 | 4.59E-174 | transposed |
Pathway information
