Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy1g0235 ATGAAGAAATCTACTTTCTTTTGCCTTCTTCTGCTGCTGCTCCTCCCTCTAATTCAACAAGCCTCTTCTTCTTCCCAGGCTTACATTGTGTACTTTGGAGAGCACCATGGAGGCAAAGCATGGGAGGAGATTGAAGAAATCCACCATTCATATTTGGTGTCTGTAAAAGAAACTGAAGAAGATGCAAAATCCTCTCTTCTTTACAGCTACAAGCGCACCATCAATGGCTTTGCAGCTCTTCTTACTGAACAAGAAGCCTCCAAACTTTCAGAATTGGAGGAAGTGGTGAGTGTGATTCAGAGTAAAAAATACAGCATGCACACCACAAGGTCATGGGAGTTTTCTGGGGTTGAAGAAGACAAGCCCAGAATTAATGACTTGGTTTCTAGAGCTAACTATGGAAAAGATGTTGTCATTGGAATGCTTGACAGTGGTAATTTTTTACAGAAGATAATTGGAGCTAGATATTACCTAAAGGGATATGAGCATCACTTCGGGCGTTTAAATGAAACGATTGACTACCGATCACCGTGCGACAAGGACGGCCACGGATCACACACAGCTTCCATTGCCGGCGGCCGGAGGGTCTACAACGTCTCAGCCTTAGGCGGCGTCGCTCGAGGCACGGCCTCCGGCGGGGCCCCGGGGGTCCGGCTGGCAATTTACAAAGTTTGTTGGGCAATTCCCAACCAAATGAAAATTCTGGGAAACGTTTGCTTCGACACCGACATGTTGGCCGCCATGGACGACGCCATTGCCGACGGCGTCGACGTTCTGAGCCTCTCCATCGGAAAATCGGATCCGTACAATTACACCGATGACGGAATCGCCATCGGAGCTCTGCACGCCGTTAAAAGGGACATTGTGGTGTCTTGTAGCGCCGGAAATTACGGCCCTACGCCGTCGGCGTTGTCGAATATTGCACCGTGGATCATCACCGTCGGAGCTAGCACCGTGGATCGGGAATTTTACTCTCCAGCCATTCTCGGAAATGGCTTGAAGATTAAGGGATTGTCGGTGGCTCCGTCGAAGTTGGAGATGAAGAAGATGTACCCTTTAGTGTATGCTAGAGATATAGAAATGCCACATGTACCCCAAAACGAATCCGGTCTATGTGTTGCAGGCTCGCTTTCACACGATAAAGCCAGAGGAAAAATAGTGCTGTGCTTTAGAGGAGAAGGAATCAGCAGATACGCCGGCAGCCTGGAAGTGAAAAGGTCCGGCGGCGCCGGAATGATAATCGGAAACGTGCCGGCGGTGGGACGGAGGCTGCACGCTGATCCCCATTTTGTTCCGGCCACCGCCGTGTCTTACGAAGATGCAAATATGATCCTCAAATATATAAAATCTCACGCAAATCCAACGGCAACAATTGTTCCACCCATCACCATCTATGGCTCTAGGCCGGCGCCGGCCATGGCCAACTTTTCAAGTAGAGGTCCAAACCTCATCGATCCTCATTTTCTTAAGCCGGACATAACAGCACCAGGAGTGGACATTCTAGCAGCATGGTCAGAGGAAGATTCCCCAACAAAACTACCAAAATTCTTGGACCCTCGTATCGTCAAATACAATCTCTACTCCGGCACTTCCATGTCCTGTCCCCACGTCTCCGCCGCCGCCGCCCTCCTCCGCGCCATCCACCCCACCTGGTCCCAAGCCGCCATCCGCTCCGCCCTCATGACCACCGCCACCACCACCAACAAATCCGGCCACCCCATCACCGACGACTCCACCGCCGACAACTCCCCCGCCACCCCTTTCTCCTTCGGCTCCGGCCACTTCCGCCCCTCCAAGGCGGCCGACCCCGGCCTTGTCTACGACTCCAATTACACCGACTATCTCCACTACCTGTGCGGCCTCAAAATGAACTCCATCGACCCTTCCTTCAAGTGCCCCCCACGTGCCCTCCTACCCCACGACCTCAATTACCCTTCCATCGCCGTCCCCAAGCTGAGAGGCGCCGTGAGGATCAAAAGGACGGTGACCAACGTGGGCGGCGGAGGTAAAAGTGTTTACTTTTTTCACAGCCAGGCGCCGCCGGGTGTGGCGGTGAGGGCGGATCCGAATGTTTTGTACTTCGACAGAGTTGGGCAGAGGAAAAGTTTTACGATCACGGTGAGTGGGAAGGTGAAGGGCGGGGTTGATGGAAGTGGATACTCTTTTGGTTGGTTTGCTTGGAGCGATGGGATTCACTATGTTAGAAGCCCAATTGCAATTTCTTCAACTTAA 2232 52.15 MKKSTFFCLLLLLLLPLIQQASSSSQAYIVYFGEHHGGKAWEEIEEIHHSYLVSVKETEEDAKSSLLYSYKRTINGFAALLTEQEASKLSELEEVVSVIQSKKYSMHTTRSWEFSGVEEDKPRINDLVSRANYGKDVVIGMLDSGNFLQKIIGARYYLKGYEHHFGRLNETIDYRSPCDKDGHGSHTASIAGGRRVYNVSALGGVARGTASGGAPGVRLAIYKVCWAIPNQMKILGNVCFDTDMLAAMDDAIADGVDVLSLSIGKSDPYNYTDDGIAIGALHAVKRDIVVSCSAGNYGPTPSALSNIAPWIITVGASTVDREFYSPAILGNGLKIKGLSVAPSKLEMKKMYPLVYARDIEMPHVPQNESGLCVAGSLSHDKARGKIVLCFRGEGISRYAGSLEVKRSGGAGMIIGNVPAVGRRLHADPHFVPATAVSYEDANMILKYIKSHANPTATIVPPITIYGSRPAPAMANFSSRGPNLIDPHFLKPDITAPGVDILAAWSEEDSPTKLPKFLDPRIVKYNLYSGTSMSCPHVSAAAALLRAIHPTWSQAAIRSALMTTATTTNKSGHPITDDSTADNSPATPFSFGSGHFRPSKAADPGLVYDSNYTDYLHYLCGLKMNSIDPSFKCPPRALLPHDLNYPSIAVPKLRGAVRIKRTVTNVGGGGKSVYFFHSQAPPGVAVRADPNVLYFDRVGQRKSFTITVSGKVKGGVDGSGYSFGWFAWSDGIHYVRSPIAISST 743
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2117886 2126328 - Maker00011669 Lcy1g0235 622147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy1g0235 743 SUPERFAMILY Subtilisin-like 107 605 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lcy1g0235 743 MobiDBLite consensus disorder prediction 566 585 - -
Lcy1g0235 743 Pfam Fibronectin type-III domain 641 740 IPR041469 -
Lcy1g0235 743 Pfam Subtilase family 134 593 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lcy1g0235 743 Gene3D Peptidase S8/S53 domain 147 614 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lcy1g0235 743 Gene3D - 320 465 - -
Lcy1g0235 743 CDD PA_subtilisin_like 328 458 - -
Lcy1g0235 743 CDD Peptidases_S8_3 104 565 IPR034197 -
Lcy1g0235 743 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 107 IPR037045 -
Lcy1g0235 743 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 28 145 IPR045051 -
Lcy1g0235 743 Gene3D - 618 743 - -
Lcy1g0235 743 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Lcy1g0235 743 PRINTS Subtilisin serine protease family (S8) signature 179 192 IPR015500 -
Lcy1g0235 743 PRINTS Subtilisin serine protease family (S8) signature 528 544 IPR015500 -
Lcy1g0235 743 Pfam Peptidase inhibitor I9 28 107 IPR010259 -
Lcy1g0235 743 FunFam subtilisin-like protease SBT1.5 320 465 - -
Lcy1g0235 743 ProSiteProfiles Serine proteases, subtilase domain profile. 111 601 - -
Lcy1g0235 743 FunFam Subtilisin-like protease SBT5.3 17 107 - -
Lcy1g0235 743 Pfam PA domain 351 443 IPR003137 -
Lcy1g0235 743 ProSitePatterns Serine proteases, subtilase family, serine active site. 529 539 IPR023828 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy1g0235 Lcy-Chr1:2117886 Lcy4g0408 Lcy-Chr4:4986760 1.21E-184 dispersed
Lcy1g0235 Lcy-Chr1:2117886 Lcy6g1880 Lcy-Chr6:39409989 4.59E-174 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy1g0235 - - - 0.0