Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy1g0304 ATGGGAAAGCATTCGAAGACCAGCTGCAAATCGGCTTCCCACAAGCTCTTTAAGGATAAGGCAAAGAACCGTGTCGATGATCTGCAAAGTATATTTGTAGATTTGCAATATGCAAGGAAAGAGAGCCGCTCAGTTGATGTGGCAGTCCTCGAGGAACAAGTTCATCAGATGCTTCGTGAGTGGAAAGCTGAGCTGAACGAGCCCTCTCCAGCATCCTCTTTGCAACAAGTTAGCATTTTATGTTTGACTCAGGGTGGAAGTCTTGGGTCATTTTCATCGGACATTTGTCGATTGTTACAACTTTGCGAGGAGGATGATGATGCATCTAGTCCATTAGCTGCTCCGAAGCCTGAACCTAATGAACAAAATCTGCAGGTTGGAGATACTATGGCACTTCAAGAGGGATATAATATGAATCGTGTACACCAAGAACCAAGCTTCCCTCTAGTTGATCAATGCAAGAACTCCCCTTCTGGAGTTCATGGTATGGCTATGAATAACTTGGAAGGGCCTACACATTTGGAATGTCATCAGTTTGATTTACATCAAGGCATTGAGCACAGCTTTTACTCTCTCCTTAATGGTAGAGGTTTGTGTGGGGAGGGTGCAATTCCTCATGTTTCTAGCTACTGTCCCAGCATATGCCCTCCACCTGCTGCTTTCTTGGGCCCAAAGTGTGCACTTTGGGATTGCCCACGACCTGCCCAAGGGTTGGATTGGTGTGAGGACTACTGTAGCAGTTTTCATGCTGCCTTGGCATTGAACGAAGGCCCTCCTGGAATGGGTCCAGTTTTACGACCTGGTGGCATTGGTCTGAAGGATGGTTTACTTTTTGCTGCTCTTAGTGCAAAGGCACAAGCAAAAGATGTTGGTATCCCTGAATGTGAGGGAGCTGCCACGGCAAAATCCCCATGGAATGCTCCTGAACTTTTTGATTTGTCAATATTGGAGGGTGAGATGATTAGGGAGTGGCTTTTCTTTGATAAGCCTCGTAGAGCATTTGAGAGTGGGAATAGGAAGCAGAGGTCATTGCCTGATTATAGTGGACGTGGTTGGCATGAATCAAGAAAGCAAGTGATGAATGAGTTTGGAGGGCTGAAAAGATCTTATTACATGGATCCTCAGCCATTGAACCACTTTGAGTGGCATCTTTATGAATATGAAATTAATAAGTATGATGCCTGCGCTTTGTATAGATTGGAGCTGAAACTAGTTGATGGGAAAAAAAGTTCTAAGGCGAAAGTAACAAATGATTCAGTTGCTGATTTACAGAGGCAAATGGGGAGACTGACTGCTGAGTTTCCTGATAATAAACGCTTTGTGAAGGGGAGGACCAAAATTAACTCAAAAGTTGGTATTGGAAATGTTTACCCCTCAGCAAATAGAGTCATGCCACCCAATGGAACATATGACTATATGCTTCATGCACAATACGATTACCTTGTGGAGAATTTGAGCGAATATTACCTTACATAG 1476 44.04 MGKHSKTSCKSASHKLFKDKAKNRVDDLQSIFVDLQYARKESRSVDVAVLEEQVHQMLREWKAELNEPSPASSLQQVSILCLTQGGSLGSFSSDICRLLQLCEEDDDASSPLAAPKPEPNEQNLQVGDTMALQEGYNMNRVHQEPSFPLVDQCKNSPSGVHGMAMNNLEGPTHLECHQFDLHQGIEHSFYSLLNGRGLCGEGAIPHVSSYCPSICPPPAAFLGPKCALWDCPRPAQGLDWCEDYCSSFHAALALNEGPPGMGPVLRPGGIGLKDGLLFAALSAKAQAKDVGIPECEGAATAKSPWNAPELFDLSILEGEMIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMNEFGGLKRSYYMDPQPLNHFEWHLYEYEINKYDACALYRLELKLVDGKKSSKAKVTNDSVADLQRQMGRLTAEFPDNKRFVKGRTKINSKVGIGNVYPSANRVMPPNGTYDYMLHAQYDYLVENLSEYYLT 491
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 2704587 2707790 - Maker00011942 Lcy1g0304 622216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy1g0304 491 PANTHER TRANSCRIPTION FACTOR VOZ1 1 489 IPR039277 GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0043565(PANTHER)|GO:0045893(PANTHER)|GO:0048578(PANTHER)|GO:0048578(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy1g0304 Lcy-Chr1:2704587 Lcy8g1396 Lcy-Chr8:40645792 5.40E-163 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
19500 None None None None Lcy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy1g0304 - - - 0.0