Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy1g0433 ATGGAGTTACTCGATGCCCTTCTCCTCCTCTTCGCCTTCCTCTTTTTCTCCTTATGGTGGCGTTACTGGTCCTCCACCGGCGGCGGATCCAAGAATCTCCCGCCGGGGCCACCGGGCTGGCCGATCGTCGGCAACCTAATACAAGTCATCCTCCAACGTCGTCCTTTCATCTTCATAGCTCGCGATTTACGTGAAAAGTACGGCCCGATTTTCACCATGCAAATGGGCCAACGCACGCTCATCATTGTGTCGAGTGCCGAACTGATTCACGAAGCTCTCGTGCAAAGAGGTCCGTTATTCGCCAGCCGCCCCGCCGACTCCCCGATCCGCCTCGTCTTCAGCGTCGGAAAATGCGCCGTCAACTCCGCCGAGTACGGCCCTCTCTGGCGAACCCTCCGCCGCAACTTCGTGACGGAGCTGATAAACCCGACGAGGATCAAGCAGTGCAGCTGGATTCGCAAGTGGGCCATAGAGAGCCATCTCGAAAGGCTGAGGAAAGAGAATTCGGAGAAGGGATTTGTGGAGGTGATGAGCAACTGCCGGCTGTCGGTGTGTAGCATTCTGATTTGCATTTGCTTTGGAGCGAGAATCCCGGAAGAGGACATCAAGGTGATAGAGAGCATATTAAAGGACGTGATGTTGATTACGTTGCCGAAGCTTCCGGACTTTTTGCCGATTCTGACACCGTTGTTTAGGCGCCAGCTGAAGGAGGCGAAGGAGCTGAGGAAGAAACAGTTGGAGTGTCTGATTCCGTTGATAAGGAAGAGGAGGATGTTTGTGGAGAGGAATGGGGACGAGAGCGTGAGGGAGGAGTTGCCGGAGATGGCTAGTCCGATTGGGGCGGCGTATCTTGACTCGCTGTTTGAATTGGAAACGCCGGGACGAGGGCGGCTGGGGGAGGAGGAGCTCGTGACGCTTTGTTCGGAGGTTATTAATGCGGGAACTGATACGAGCGCCACTGCGTTGGAGTGGGCGTTGCTTCATTTGGTACAAGAGCAAGACATTCAGGAAAGACTATACAAGGAAATTGTTGACGTTGTGGGTAAGGATGGGGTGATAACCGAAGGCGACATAGAGAAAATGCTATACCTAGGGGCAGTGGTAAAAGAGACTTTCCGGCGACATCCACCGAGCCATTTCTTACTATCTCACGCGGCTACAAAAGAGACGGAGCTCGGCGGCTACACAATTCCGGCGGACGCCAGCGTGGAGTTTTACACTGCCCATCTGTCCGACGACCCGAACACGTGGGAAGAACCGGGTTCGTTCCGACCGGACAGGTTCTTGGAGGGCGACGGCGTTGGCGTGGACGTGACCGGAACTAAGGCAGTCAAGATGGTGCCGTTCGGGGCAGGGCGGCGGATCTGCCCGGCCATGACGCTGGGCACGTTGCATGTGCACATGATGCTGGCAACAATGGTACATGCATTCAAGTGGGTCCCGGTTCCCGGATCCCCGCCCGACCCGACCGAGACCTTTGCTTTTACGGTGATTATGAAGAATCCTCTCAAGGCTGTGGTATTGGACAGGTCTCGTTTATAA 1542 55.32 MELLDALLLLFAFLFFSLWWRYWSSTGGGSKNLPPGPPGWPIVGNLIQVILQRRPFIFIARDLREKYGPIFTMQMGQRTLIIVSSAELIHEALVQRGPLFASRPADSPIRLVFSVGKCAVNSAEYGPLWRTLRRNFVTELINPTRIKQCSWIRKWAIESHLERLRKENSEKGFVEVMSNCRLSVCSILICICFGARIPEEDIKVIESILKDVMLITLPKLPDFLPILTPLFRRQLKEAKELRKKQLECLIPLIRKRRMFVERNGDESVREELPEMASPIGAAYLDSLFELETPGRGRLGEEELVTLCSEVINAGTDTSATALEWALLHLVQEQDIQERLYKEIVDVVGKDGVITEGDIEKMLYLGAVVKETFRRHPPSHFLLSHAATKETELGGYTIPADASVEFYTAHLSDDPNTWEEPGSFRPDRFLEGDGVGVDVTGTKAVKMVPFGAGRRICPAMTLGTLHVHMMLATMVHAFKWVPVPGSPPDPTETFAFTVIMKNPLKAVVLDRSRL 513
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 3831887 3834291 + Maker00011900 Lcy1g0433 622345
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy1g0433 513 CDD CYP77_89 66 504 - -
Lcy1g0433 513 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 12 507 IPR051103 GO:0016020(PANTHER)|GO:0016709(PANTHER)
Lcy1g0433 513 SUPERFAMILY Cytochrome P450 34 510 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy1g0433 513 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy1g0433 513 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy1g0433 513 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy1g0433 513 FunFam Cytochrome P450 family protein 28 512 - -
Lcy1g0433 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lcy1g0433 513 Pfam Cytochrome P450 34 501 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy1g0433 513 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy1g0433 513 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy1g0433 513 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy1g0433 513 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy1g0433 513 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy1g0433 513 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy1g0433 513 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy1g0433 513 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy1g0433 513 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy1g0433 513 Gene3D Cytochrome P450 24 509 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy1g0433 Lcy-Chr1:3831887 Lcy7g0590 Lcy-Chr7:5283200 1.39E-141 dispersed
Lcy1g0433 Lcy-Chr1:3831887 Lcy10g1694 Lcy-Chr10:41339040 4.58E-153 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy1g0433 K21995 - csv:101216852 979.163