Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy1g0468 | ATGGATGGTCCTAGTGGAAGTTCTTCTGGTATGATGAATTTTGGAGATCAAAACAATAATGGGTTGTGTTCCATGATGATGATGATGCCTTTAATGTCCTCTCACCAACACCAAAACCACCACGATGGAGATGCATGTAGTTCATTTCTTCCTCTTCCTCCTCCTCCTAATTACAACAACAACAACAACAACAACACTTCTAACCCTATTTGTTACTTCATGGACGAGAACAACAACAACAACAACGAGGGTAATAATGCAAATTCTTCTTCTTCTTCTTCTTCTGAAGTGAAGGCTAAAATCATGGCTCATCCCCACTACCATCGCCTTCTCGCTGCCTACGTCAATTGCCGTAAGGTGGGGGCGCCGCCGGAAGTGGTGGCGAGGCTTGAAGAAGCGTGTGCATCTGCAGCATCGATGAATGGTACGTCTTGTACGGGCTGTATTGGTGAAGATCCGGCGCTTGATCAGTTCATGGAAGCTTATTGTGAGATGCTCACCAAATATGAACAAGAACTTTCTAAACCCTTTAGGGATGCCATGCTTTTTCTTCAACGAATCGAGTGCCAATTCAAAGCCCTCTCTATTTCCTCCTCCGATGCTGGTGAATTTCTAACATGA | 621 | 44.44 | MDGPSGSSSGMMNFGDQNNNGLCSMMMMMPLMSSHQHQNHHDGDACSSFLPLPPPPNYNNNNNNNTSNPICYFMDENNNNNNEGNNANSSSSSSSEVKAKIMAHPHYHRLLAAYVNCRKVGAPPEVVARLEEACASAASMNGTSCTGCIGEDPALDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIECQFKALSISSSDAGEFLT | 206 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 4080190 | 4083723 | - | Maker00011907 | Lcy1g0468 | 622380 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy1g0468 | 206 | SMART | KNOX1_2 | 95 | 139 | IPR005540 | GO:0003677(InterPro)|GO:0005634(InterPro) | |
Lcy1g0468 | 206 | SMART | KNOX2_2 | 145 | 196 | IPR005541 | GO:0003677(InterPro)|GO:0005634(InterPro) | |
Lcy1g0468 | 206 | Pfam | KNOX1 domain | 97 | 135 | IPR005540 | GO:0003677(InterPro)|GO:0005634(InterPro) | |
Lcy1g0468 | 206 | MobiDBLite | consensus disorder prediction | 34 | 98 | - | - | |
Lcy1g0468 | 206 | MobiDBLite | consensus disorder prediction | 59 | 98 | - | - | |
Lcy1g0468 | 206 | PANTHER | FUSED COMPOUND LEAF 1 | 74 | 198 | - | - | |
Lcy1g0468 | 206 | Pfam | KNOX2 domain | 148 | 194 | IPR005541 | GO:0003677(InterPro)|GO:0005634(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy1g0468 | Lcy-Chr1:4080190 | Lcy7g0162 | Lcy-Chr7:1454864 | 6.22E-25 | dispersed | |
Lcy1g0468 | Lcy-Chr1:4080190 | Lcy4g0524 | Lcy-Chr4:6300644 | 5.86E-42 | wgd |
Pathway information
