Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy1g0545 ATGTTGCTGGTTTACTATTTGTGTTTGAGTTTGTTGTGGGGTAAATCGTGGGCAGCTCCGGCCGGCGGTGATGGCACCACGAGGGAGCTTGATCAGACTCCGACGTGGGCTGTTGCCGGTGTTTGTGCTATTATCATCATTATTTCTATTGCCCTGGAGAAACTCCTCCATAAAGTTGGAACGTGGCTCACGGACAAGCACAAGAAAGCTCTTTTTGAAGCTTTGGAGAAGGTTAAAGCTGAGCTGATGATTCTGGGTTTCATTTCACTGCTCCTCACCTTTGGGCAGAACTATATCATTAAAATCTGCATTCCCACAGGGGTTGCAAACACGATGTTACCGTGTGCTGGCAAAGGGGACAAAGTGGAAAAAGAATTGGGTGCAGCTGATGAAGGCGAACATCATCGACGACTTCTATGGTATGAACGTAGGTTCCTAGCTGCTGCTGGTGGTGCTGTTAGTTGCAAGGATGGTCATGTGCCGCTTATATCTATCTCGGGTTTGCATCAGTTGCACTTATTTATCTTCTTCTTAGCCGTATTTCATGTAGTATACAGTGCTATCACAATGATGCTTGGGAGGCTAAAGATTCGAGGTTGGAAGGCATGGGAGCAGGAGACCTCAACTCACAATTATGAGTTCTCAAATGATAATGCACGATTCAGGCTTACTCATGAAACGTCATTTGTGAAAGCCCACACAAGTTTTTGGACAAAACTTCCTATCTTCTTTTATATAGTAAGTAAAGGATGCTTCTTCCGACAATTTTTCAGGTCCGTTGGTAAGGCTGACTACTTGGCGTTGCGTAATGGATTCATCGCTGTTCATCTAGCTCCAGGAAGTAAATTTGACTTTCAAAAATATATTAAAAGGTCTCTGGAAGATGACTTCAAGATAATTGTGGGAGTGAGTCCCGTGCTTTGGGCATCATTTGTTGTCTTCTTGCTCATAAATGTTTACGGTACATTTTCTGATCCAAATTACGCTCTTTCAAAGTCCATATTTCCGAATATTATCCTGGCTGTTGGAACAAAGCTTCAAGGAATTATGACAAAAATGGCTCTTGAAATTACAGAAAGACATGCTGTTGTCCAAGGAATTCCTCTTGTTCAGGCATCGGATAAATATTTTTGGTTTGGCAAGCCTCAGCTGGTTCTTTATCTCATCCACTTTGCCTTATTTTCGAATGCGTTCCAAATAACGTACTTCTTCTGGATTTGGTATTCCTTTGGGCTCAAATCCTGCTTCCATACCGATTTCAAGCTCGCAATTATAAAAGTCGGTCTCGGCTATATTACTCTTCCATTGTATGCTCTTGTGACTCAGCATAAATTTTCTGTCTTGTGGGACATGGCTGATTCGGTGGCTTTGCAGATGGGTACGCGTATGAAGAAGTCGATTTTCGATGAACAAACATCGAAGGCCCTGAAGAAGTGGCACATGGCTGTTAAGAAGCGCCGTGGGAAGTCCCCAACCCGAACCCTGGGGAGCCCAAATGCTTCACCAATGCATCCATCATCTGGATACGCAGCATTGCATCGTTTCAAGACCACAGGTCACTCAAACAGATCATCCATGTATGATGAGAATGAGGCGTCTGATTACGAAGCTGATTCATTGTCGCCTAAAGTACCAACTGCGAATTTTACGATTAGAGTAGAACGTGGTGATGAACATCAAACTGAAATAATCGAATCCCAGCATTCAGAAAAAAGGAATGAAGACGATTTCTCATTTGCTAAGGCTGGACCAACGAAAGGACCATGA 1767 43.35 MLLVYYLCLSLLWGKSWAAPAGGDGTTRELDQTPTWAVAGVCAIIIIISIALEKLLHKVGTWLTDKHKKALFEALEKVKAELMILGFISLLLTFGQNYIIKICIPTGVANTMLPCAGKGDKVEKELGAADEGEHHRRLLWYERRFLAAAGGAVSCKDGHVPLISISGLHQLHLFIFFLAVFHVVYSAITMMLGRLKIRGWKAWEQETSTHNYEFSNDNARFRLTHETSFVKAHTSFWTKLPIFFYIVSKGCFFRQFFRSVGKADYLALRNGFIAVHLAPGSKFDFQKYIKRSLEDDFKIIVGVSPVLWASFVVFLLINVYGTFSDPNYALSKSIFPNIILAVGTKLQGIMTKMALEITERHAVVQGIPLVQASDKYFWFGKPQLVLYLIHFALFSNAFQITYFFWIWYSFGLKSCFHTDFKLAIIKVGLGYITLPLYALVTQHKFSVLWDMADSVALQMGTRMKKSIFDEQTSKALKKWHMAVKKRRGKSPTRTLGSPNASPMHPSSGYAALHRFKTTGHSNRSSMYDENEASDYEADSLSPKVPTANFTIRVERGDEHQTEIIESQHSEKRNEDDFSFAKAGPTKGP 588
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4704078 4709241 - Maker00012373 Lcy1g0545 622457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy1g0545 588 MobiDBLite consensus disorder prediction 520 588 - -
Lcy1g0545 588 MobiDBLite consensus disorder prediction 552 579 - -
Lcy1g0545 588 Pfam Mlo family 28 512 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Lcy1g0545 588 PANTHER MLO-LIKE PROTEIN 1 25 545 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Lcy1g0545 588 MobiDBLite consensus disorder prediction 484 508 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy1g0545 Lcy-Chr1:4704078 Lcy7g0665 Lcy-Chr7:6142794 1.77E-104 dispersed
Lcy13g2270 Lcy-Chr13:41607802 Lcy1g0545 Lcy-Chr1:4704078 4.36E-204 transposed
Lcy1g0545 Lcy-Chr1:4704078 Lcy6g2364 Lcy-Chr6:48434105 3.09E-220 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy1g0545 K08472 - csv:101212923 960.674