Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy1g0665 | ATGGAATGGGTTTTGGGATTCTGGGTTTGGTTTGTGAGTGTTGTTTTAGGTTGGTTTTGGTTGAAGAAGAAGCTGCAGCTTATTCAAAACAAGGTTGCAATTCCAAAAGGAAACCTGGGTTGGCCTCTCATTGGTGAAACCCTTCAATTCATTGCTTCTGGCTACTCTTCTCGTCCTGTCACCTTCATGGACAAACGCAAATCTCTGTACGGCAACGTGTTTAAAACCAACATTTTGGGGACACCCATCATAGTTTCCACTGATTCAGACGTGAATAAGGTGGTTTTACAGAACCATGGCAACATTTTTATCCCAGCTTACCCCAAATCAATTACCGAATTACTTGGCTCATTTTCAATTCTTCAAATGAATGGAAATGTTCAGAAAAGAGTTCATACAATCATTGGAGCTTTTCTTAGGTCTCCTCAGCTCAAAGCCCGAATCACTAGAGATATTCAAAACACCGTTAAACTAAGGCTTGCCAATTGGAATACCTCCCAATTGGTTTATGTCCAAACCGAAACCAAACAGATCACATTTGAAGTATTGGTGAAGGTGTTGATGAGTGTGGGACCCGGTGAAGATTTGAGGATTTTGAAAAGGGAATTTGAAGAGTTCATCAAAGGCTTGATTTGTATACCCATTAAACTACCTGGAACAAGGCTATATAAATCTTTGAAGGCGAGAGAGAAGCTGTTGAAAATAGTGAGAAAAATAGTGGAAGATAGAAAATCGAGGGTGGAGGAGAAGGTTGCACCGAAGGATGCGGTGGATGTGCTGTTACAGGATCACGATGAGAGCCAAGGGCTGCCGTTGGATTTCATCAGCAGTCACATCTTAGAGCTGATGATCCCCGGCGAGGAGACGGTGCCGATGGCGATGACCCTCGCCGTCAAATTTCTCAGTGACTGCCCCGTCGCTCTAGCCCAAATGACGGAGGAGAATATGGAGCTTAAGAAACACAAGGTTGATTCTGGCCACGAGTATACGTGGACAGATTACATGTCTCTGCTATTTACTCAAAATGTGATTAGTGAAACGTTAAGAATGGCTAATATCATCAATGGGGTTTGGAGGAAAGCTCAAAAAGATGTGCAAATCAAAGGCTATTTAATACCACAAGGATGGTGCGTTTTGGCATCTTTTATTTCGGTTCATATGGATGAAAACAACTATGCAAACCCACATCAGTTTGATCCATGGAGATGGGAGGGGGACAGAGGCTATGTCCCGGCATCGAACTCGCCCGGCTCGAAATCTCAATTTTCCTTCATCATCTTCAGATGGGGAGCTGAAAAGGATGAAATCATCCATTTTCCGACAGTGAAGATGAGAAGGAAGCTGCCAATTGCTATCACAACCTTAAGCTCTTGA | 1374 | 43.16 | MEWVLGFWVWFVSVVLGWFWLKKKLQLIQNKVAIPKGNLGWPLIGETLQFIASGYSSRPVTFMDKRKSLYGNVFKTNILGTPIIVSTDSDVNKVVLQNHGNIFIPAYPKSITELLGSFSILQMNGNVQKRVHTIIGAFLRSPQLKARITRDIQNTVKLRLANWNTSQLVYVQTETKQITFEVLVKVLMSVGPGEDLRILKREFEEFIKGLICIPIKLPGTRLYKSLKAREKLLKIVRKIVEDRKSRVEEKVAPKDAVDVLLQDHDESQGLPLDFISSHILELMIPGEETVPMAMTLAVKFLSDCPVALAQMTEENMELKKHKVDSGHEYTWTDYMSLLFTQNVISETLRMANIINGVWRKAQKDVQIKGYLIPQGWCVLASFISVHMDENNYANPHQFDPWRWEGDRGYVPASNSPGSKSQFSFIIFRWGAEKDEIIHFPTVKMRRKLPIAITTLSS | 457 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 5707684 | 5715862 | - | Maker00012221 | Lcy1g0665 | 622577 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy1g0665 | 457 | Gene3D | Cytochrome P450 | 25 | 433 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy1g0665 | 457 | SUPERFAMILY | Cytochrome P450 | 31 | 431 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy1g0665 | 457 | CDD | CYP90-like | 66 | 453 | - | - | |
Lcy1g0665 | 457 | Pfam | Cytochrome P450 | 35 | 430 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy1g0665 | 457 | PANTHER | CYTOCHROME P450 26 | 33 | 430 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)|GO:0016709(PANTHER) | |
Lcy1g0665 | 457 | PRINTS | E-class P450 group IV signature | 337 | 353 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy1g0665 | 457 | PRINTS | E-class P450 group IV signature | 61 | 84 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
Lcy1g0665 | 457 | PRINTS | E-class P450 group IV signature | 386 | 404 | IPR002403 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy1g0665 | Lcy-Chr1:5707684 | Lcy3g2208 | Lcy-Chr3:48938655 | 5.28E-99 | dispersed | |
Lcy1g0665 | Lcy-Chr1:5707684 | Lcy13g0159 | Lcy-Chr13:1628527 | 4.63E-115 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy1g0665 | K12637 | - | csv:101203911 | 724.161 |