Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy1g0718 ATGCCCGTATATCCTAGGATGCCCATACGGGAGCATTGTGCTTTGCGCTTCATCCTAGCATATCATACCTCAAGTGAGCTAGAAGTAAAAGAGGAAGGATTTGGAAATGTGGAAAGGCCAGGGTTAGGGCTTACGCCAAAGCGCGAGAACGTGTTGAGTTCACGTGAAACGGCGAGTTTCACTGGATTTTCCGACCCGTTTCAGGTTCAGAGAGTGGTCGACGGTGGAGAAACGAGCTTTCAGTTTCCGAACTTGGAGCACCATTCTTCTGCTTTCAGATTCTCCGATTTCGACGGCGGCGCTGCTGCGGAGTTCGACTCTGATGAGTGGATGGACAGTCTAATGGCTGGTGGAGATTCAACGGATAGCTCTAATCTTCCTTCTGCTTGCGACGCGTGGCAGTCTAATTCGGATTTTGCTTTCTACGGTGCCGATCCCTTTGTCCCCTGTCCCAGTCGCCTCACTATCCCCTGTTCTTCACCCTCTGATCTTAACAGAGTCATTTTCCCTGAACCTCCGAAAAATCAAACCGCAGTTCAACCGCCGGTGGTTTCATGGACGGGGCTTCCGCCGGCGCCTCCACCGGTGGTGGTGAAGGACACTCAACTCCCCAACGTTCCCCTTGCGATCCACAAGAGTGAAGATAACGGCGGTTCGTCGAGTTCTGCAGAGACTGAATCGACACCGCCACTTCTTAAAACCCTAATTGAATGTGCTCGACTTTCCGAATCGGAGCCAGATCGAGCGGCACAAATGTTGATTCAGCTTAACGAATCGTCAACGGAGCACGGAGATCCGACGGAGAGGGTCGCTTTTTACTTTCTCGAAGCTCTATGCCGGAGGTTATCACTTCAATCGGACAATCGTTTGGTTTCTTCTGAATCCACTTCCGATGATTTCACTCTCTCCTACAAAGCTCTCAACGATGCTTGCCCTTACTCTAAATTCGCCCATTTGACTGCAAATCAAGCTATACTCGAAATTACAGAGAATGCAAGCAAGATTCACATAATCGACTTTGGAATCGCTCAGGGAGTTCAATGGGCGGCTCTTCTGCAAGCTCTCGCAACTCGCTCCACCGGAAAACCAACCGGAATTCGGATCTCCGGCATTCCGGCTCCAATGCTCGGGAACTGTCCAGCGACGGCGCTGTTCGCAACGGGTAATCGACTGGCCGAGTTCGCAAAGCTTCTGGAACTGAACTTCGAATTCGACCCAATTCTAACCCCAATCGAAGAGCTGAACGAATCCTCCTTCCGAATCGACTCCGACGAAACCCTCGCCGTGAATTTCATGCTTCAATTGCACAATCTCCTCGACGAAACTCCTCGCGCCGTTCTGAACATTCTGCAACTCGCTAAATCGCTGAACCCTAGAATCGTAACCCTCGGCGAATACGAAGCCAGCCTGAACCGGGTCGGGTTCTTCAACCGGTTCAAGAACGCCCTCAGATACTACTCAGCCATGTTCGAATCACTGGACCCGAAACTGCCTCGCGACTCAAACGAGAGGCTGCAACTGGAAAAGCTGGTACTCGGGCGGCAGATCGCCGGCCTTGTCGGACCGGAGCCGCCGCCGGGATCGAAAACCGAACGAATGGAAGACAAAGAACAGTGGAAAATCCTAATGGAAAATTGCGGCTTCGAACCAGTAAATCTCAGCCATTACGCGAAAAGTCAAGCTAAAATCCTCTTATGGAAATACGATTACAGCTCTGAGTATTCTTTGATCGAATCCTCACCTGGGTTTCTCTCGTTGGCATGGAATGAAGTCCCGATCATTACAGTTTCGTCATGGCGTTGA 1803 50.97 MPVYPRMPIREHCALRFILAYHTSSELEVKEEGFGNVERPGLGLTPKRENVLSSRETASFTGFSDPFQVQRVVDGGETSFQFPNLEHHSSAFRFSDFDGGAAAEFDSDEWMDSLMAGGDSTDSSNLPSACDAWQSNSDFAFYGADPFVPCPSRLTIPCSSPSDLNRVIFPEPPKNQTAVQPPVVSWTGLPPAPPPVVVKDTQLPNVPLAIHKSEDNGGSSSSAETESTPPLLKTLIECARLSESEPDRAAQMLIQLNESSTEHGDPTERVAFYFLEALCRRLSLQSDNRLVSSESTSDDFTLSYKALNDACPYSKFAHLTANQAILEITENASKIHIIDFGIAQGVQWAALLQALATRSTGKPTGIRISGIPAPMLGNCPATALFATGNRLAEFAKLLELNFEFDPILTPIEELNESSFRIDSDETLAVNFMLQLHNLLDETPRAVLNILQLAKSLNPRIVTLGEYEASLNRVGFFNRFKNALRYYSAMFESLDPKLPRDSNERLQLEKLVLGRQIAGLVGPEPPPGSKTERMEDKEQWKILMENCGFEPVNLSHYAKSQAKILLWKYDYSSEYSLIESSPGFLSLAWNEVPIITVSSWR 600
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6147137 6152114 - Maker00012464 Lcy1g0718 622630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy1g0718 600 ProSiteProfiles GRAS family profile. 222 600 IPR005202 -
Lcy1g0718 600 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 224 599 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Lcy1g0718 600 Pfam GRAS domain family 232 600 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy1g0718 Lcy-Chr1:6147137 Lcy9g0957 Lcy-Chr9:32038209 2.99E-56 dispersed
Lcy6g0963 Lcy-Chr6:10061316 Lcy1g0718 Lcy-Chr1:6147137 1.43E-216 transposed
Lcy1g0718 Lcy-Chr1:6147137 Lcy6g0948 Lcy-Chr6:9798003 3.10E-23 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
19535 None None None None Lcy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy1g0718 - - - 0.0