Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy1g0936 | ATGGCGAAGCCGCTTTGGATTCTTCTACTTCTCTGTTTCTTCTCTAGGCCGTCAATGGCTGTTCCAGACAAGAAGACTTACATCGTGCATATGGCCAAGTACCAAATGCCGGAGAGTTTTGAGCACCATTTGCACTGGTATGACTCGTCCCTCAAATCCGTCTCCGATACGGCGGAGATGATCTATGCTTACAACAACGTCGTTCATGGGTTTTCAACCAGATTGACGGCGGAGGAAGCTCAGCGCCTGGAGTCCCAACCTGGGATTTTGGCTGTGGTGCCGGAGATGAGATATGAACTTCATACCACTCGTACTCCTCAGTTTCTTGGACTTGACAAGAATGCAGATCTGTACCCTGAATCGACCTCAGTATCGGAGGTGATCATCGGAGTTTTGGATACCGGGGTTTGGCCGGAGAGTAAGAGCTTCGACGATACTGGGCTTGGACCGGTGCCGAGTAGCTGGAAGGGTGAGTGTGAATCCGGTACTAATTTCAGTGCGTCGAACTGTAACAGGAAGCTGATCGGAGCGAGGTATTTTTCCAAGGGCTACGAGGCGACTCTCGGTCCGATCGATGAATCCAAAGAATCGAGATCTCCGAGAGACGACGACGGCCATGGAACCCACACCGCAACCACTGCCGCCGGTTCTGTAGTGGAAAACGCCAGCCTATTTGGCTACGCCTCTGGCACCGCCCGTGGGATGGCTGCACGTGCGAGGGTCGCTGCCTATAAGGTCTGTTGGGCCGGCGGATGTTTCAGCTCCGACATCTTGGCAGCCATTGAAAAAGCTGTGGAGGACAATGTTAATGTCCTTTCCATGTCGCTCGGCGGTGGAATATCCGACTATTACAAAGACAGCGTTGCCTCCGGAGCCTTCGCCGCCATGGAGAAAGGCATCCTCATTTCTTGCTCCGCCGGAAATGCGGGCCCCAGCCCTTACAGCTTGTCGAATACGTCTCCATGGATCACAACCGTCGGTGCCGGAACATTAGATCGCGATTTTCCGGCGTACGTCAGTCTCGGCGACGGCAAAAACTTCTCCGGTGTTTCGCTCTATCGAGGCAAGCCATTGCCGGGAACCTTGTTGCCTTTTATTTACGCCGCTAATGCGAGTAACTCTGCTAATGGCAATTTGTGTATGACCGGTACTTTGATCCCTGAAAAAGTTGCCGGAAAAATCGTGTTCTGTGACCGAGGTGTAAATCCTAGGGTTCAGAAAGGGGCGGTCGTCAAAGCCGCAGGTGGAATCGGAATGGTGTTGGCCAACACCGCCGCAAACGGAGAAGAGTTGGTGGCCGACTCTCATCTTCTGCCGGCCACGGCGGTGGGTCAGAATTTCGGCGACATTATACGGAAGTATCTGATTTCGGAGCCGAAACCGACGGTGACGATCTTATTCGAAGGTACAAAATTGGGGATCCAACCGTCGCCGGTGGTGGCGGCTTTCAGTTCCCGGGGACCCAATTCGATCACTCCTCAGTTGCTGAAGCCCGACATAATCGCTCCTGGTGTCAACATTTTAGCTGGATGGTCAAAATCAGTGGGGCCGAGTGGTTTAGCCATTGATGACAGAAGAGTGGATTTCAACATTATCTCTGGCACCTCCATGTCCTGCCCCCATGTGAGCGGTCTCGCCGCCCTAATCAAAGGGGCTCATCCCGACTGGAGCCCGGCGGCGATTCGTTCGGCGTTGATGACGACGGCCTACACAGCCTACAAAAACGGCCAGAAGATCCAAGATACCGCCACCGGAAAACCGTCCACGCCATTCGATCACGGAGCCGGACACGTCGATCCAGTATCAGCCCTCAATCCGGGTCTTGTTTACGATCTAACGGTGGACGATTACCTGAACTTCCTCTGTGCACTTAACTACACTTCGTCGCAGATCAACTCACTGGCGAGGAGAGATTTCACTTGCGACTCCGGGAAGAAGTACAGTGTCAACGATCTCAACTACCCTTCTTTCGCCGTCGTTTTCGACGGCGTATTAGGCGGAGGTTCCAGTGTAGTCAAGCACACCAGAACTCTTACAAACGTCGGCTCTCCAGGAACATACAAAGTCTCAATCTCGTCGGAGACCAAGCTGGTGAAAATCTCCGTCGAGCCAGAATCTTTAAGCTTCACCGAAGCCAATGAGAAGAAGTCGTACACAGTCACATTCACCACCGCAACTGGTTCGGCGGCGCCGCCGAGCGCGGAGGGGTTCGGTAGAATTGAGTGGTCGGACGGGAAGCACGTGGTGGGAAGTCCGATTGCGTTTAGTTGGACGTAG | 2277 | 53.54 | MAKPLWILLLLCFFSRPSMAVPDKKTYIVHMAKYQMPESFEHHLHWYDSSLKSVSDTAEMIYAYNNVVHGFSTRLTAEEAQRLESQPGILAVVPEMRYELHTTRTPQFLGLDKNADLYPESTSVSEVIIGVLDTGVWPESKSFDDTGLGPVPSSWKGECESGTNFSASNCNRKLIGARYFSKGYEATLGPIDESKESRSPRDDDGHGTHTATTAAGSVVENASLFGYASGTARGMAARARVAAYKVCWAGGCFSSDILAAIEKAVEDNVNVLSMSLGGGISDYYKDSVASGAFAAMEKGILISCSAGNAGPSPYSLSNTSPWITTVGAGTLDRDFPAYVSLGDGKNFSGVSLYRGKPLPGTLLPFIYAANASNSANGNLCMTGTLIPEKVAGKIVFCDRGVNPRVQKGAVVKAAGGIGMVLANTAANGEELVADSHLLPATAVGQNFGDIIRKYLISEPKPTVTILFEGTKLGIQPSPVVAAFSSRGPNSITPQLLKPDIIAPGVNILAGWSKSVGPSGLAIDDRRVDFNIISGTSMSCPHVSGLAALIKGAHPDWSPAAIRSALMTTAYTAYKNGQKIQDTATGKPSTPFDHGAGHVDPVSALNPGLVYDLTVDDYLNFLCALNYTSSQINSLARRDFTCDSGKKYSVNDLNYPSFAVVFDGVLGGGSSVVKHTRTLTNVGSPGTYKVSISSETKLVKISVEPESLSFTEANEKKSYTVTFTTATGSAAPPSAEGFGRIEWSDGKHVVGSPIAFSWT | 758 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 8169958 | 8172234 | + | Maker00012804 | Lcy1g0936 | 622848 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy1g0936 | 758 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 534 | 544 | IPR023828 | - | |
Lcy1g0936 | 758 | FunFam | subtilisin-like protease SBT1.5 | 332 | 472 | - | - | |
Lcy1g0936 | 758 | Pfam | Fibronectin type-III domain | 651 | 754 | IPR041469 | - | |
Lcy1g0936 | 758 | SUPERFAMILY | PA domain | 375 | 452 | IPR046450 | - | |
Lcy1g0936 | 758 | Gene3D | - | 621 | 757 | - | - | |
Lcy1g0936 | 758 | CDD | Peptidases_S8_3 | 98 | 570 | IPR034197 | - | |
Lcy1g0936 | 758 | Gene3D | Peptidase S8/S53 domain | 127 | 617 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Lcy1g0936 | 758 | FunFam | Subtilisin-like protease SBT1.5 | 126 | 347 | - | - | |
Lcy1g0936 | 758 | Pfam | PA domain | 378 | 450 | IPR003137 | - | |
Lcy1g0936 | 758 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 16 | 101 | IPR037045 | - | |
Lcy1g0936 | 758 | Pfam | Subtilase family | 126 | 580 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Lcy1g0936 | 758 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 26 | 753 | IPR045051 | - | |
Lcy1g0936 | 758 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 97 | 604 | - | - | |
Lcy1g0936 | 758 | Gene3D | - | 332 | 473 | - | - | |
Lcy1g0936 | 758 | FunFam | Subtilisin-like protease SBT1.9 | 15 | 101 | - | - | |
Lcy1g0936 | 758 | Pfam | Peptidase inhibitor I9 | 26 | 101 | IPR010259 | - | |
Lcy1g0936 | 758 | CDD | PA_subtilisin_like | 338 | 465 | - | - | |
Lcy1g0936 | 758 | MobiDBLite | consensus disorder prediction | 190 | 208 | - | - | |
Lcy1g0936 | 758 | SUPERFAMILY | Subtilisin-like | 100 | 608 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Lcy1g0936 | 758 | PRINTS | Subtilisin serine protease family (S8) signature | 533 | 549 | IPR015500 | - | |
Lcy1g0936 | 758 | PRINTS | Subtilisin serine protease family (S8) signature | 124 | 143 | IPR015500 | - | |
Lcy1g0936 | 758 | PRINTS | Subtilisin serine protease family (S8) signature | 202 | 215 | IPR015500 | - | |
Lcy1g0936 | 758 | MobiDBLite | consensus disorder prediction | 190 | 213 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy1g0936 | Lcy-Chr1:8169958 | Lcy2g0978 | Lcy-Chr2:9124001 | 2.26E-286 | dispersed | |
Lcy8g1248 | Lcy-Chr8:39042713 | Lcy1g0936 | Lcy-Chr1:8169958 | 3.98E-254 | transposed | |
Lcy1g0936 | Lcy-Chr1:8169958 | Lcy13g2125 | Lcy-Chr13:40144800 | 0 | wgd |
Pathway information
