Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy1g1081 | ATGCTAAAGTTAGAAAACGAAAGGAGGAGAGCAAGAGAGCAAGAGGAGAGAGTCGAGAATAGAGTTCGAGATCCTTTCTTCAGTGATGAAGAGGGGTTTAAATACCTGCTCATGCTCCTAGGATTTTTAGAAATTTGGAGGCGTTTCGGGCTGAACCAGGTAGAACCGTGGCGACCAGGGGCTGCAGGGACCGAATGGAGGCAGAGGACCAGGGGCTGTAGCCGAGGCCGAGGCCCATGGTCGACCCTTGGCCCGCTTGTGCGGGCCAAGCTCGTCCAGCTCCGTTCGGTCCCTCCTGCCTCTGGCCGCCCTGGTTCCGCCTGGTATATGGTAGACGAACACGAAGGACTCGACTGCAACAACAAGTTCTTGAGAGATACGGTCTTAACCTTCATGGTCGCAGGCCGAGACGCTTTGGGCGTAGCTCTCTGTTGGCTCTTCTACACCCTCTCCAAGAACCCCATCATATTAACAAAGATTCGAGAAGAGCTCAAAGGCATAATAAACCCACAAAAAAAACAACAAAGAATAATATTCTCCATTGAAGACCTCAACAACCTCGTTTACTTGCATGGAGCCTTATGCGAAACGCTTCGTCTCTATCCTCCGATTGCATTCGAGCACAAATCTCCAGCAGAAGCCGACACCCTTCCGAGCGGCCACCACGTGAAGCCACACACGATGATAATCTTCCCGCTGTACGCACTGGGAAGAATGAGGTCTGTTTGGGGAGAGGATTGCGAAGAATTCAAACCAGAGAGATGGATTTCGGAGAAGGGGACGATCAAACGAGAGCCTTCGTATAAGTTCTTCAGTTTCAATGCAGGGCCAAGAACTTGTTTGGGAAAAGGAGTGGCTTTTTCCTACTTGAAGATTATTTCAGCTGCCATTATCCATAACTACGACATTCAAGCTGTTGAAGGAAACAATGGTGTTGTTGCTCCA | 945 | 49.84 | MLKLENERRRAREQEERVENRVRDPFFSDEEGFKYLLMLLGFLEIWRRFGLNQVEPWRPGAAGTEWRQRTRGCSRGRGPWSTLGPLVRAKLVQLRSVPPASGRPGSAWYMVDEHEGLDCNNKFLRDTVLTFMVAGRDALGVALCWLFYTLSKNPIILTKIREELKGIINPQKKQQRIIFSIEDLNNLVYLHGALCETLRLYPPIAFEHKSPAEADTLPSGHHVKPHTMIIFPLYALGRMRSVWGEDCEEFKPERWISEKGTIKREPSYKFFSFNAGPRTCLGKGVAFSYLKIISAAIIHNYDIQAVEGNNGVVAP | 315 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 9814478 | 9816082 | + | Maker00013491 | Lcy1g1081 | 622993 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy1g1081 | 315 | Pfam | Cytochrome P450 | 118 | 308 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy1g1081 | 315 | PRINTS | P450 superfamily signature | 134 | 151 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy1g1081 | 315 | PRINTS | P450 superfamily signature | 280 | 291 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy1g1081 | 315 | PRINTS | P450 superfamily signature | 271 | 280 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy1g1081 | 315 | PRINTS | P450 superfamily signature | 192 | 203 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy1g1081 | 315 | PRINTS | E-class P450 group I signature | 280 | 303 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy1g1081 | 315 | PRINTS | E-class P450 group I signature | 270 | 280 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy1g1081 | 315 | PRINTS | E-class P450 group I signature | 143 | 169 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy1g1081 | 315 | SUPERFAMILY | Cytochrome P450 | 113 | 308 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy1g1081 | 315 | Coils | Coil | 1 | 24 | - | - | |
| Lcy1g1081 | 315 | Gene3D | Cytochrome P450 | 105 | 313 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy1g1081 | 315 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 273 | 282 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lcy1g1081 | 315 | PANTHER | CYTOCHROME P450 | 115 | 307 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy1g1081 | Lcy-Chr1:9814478 | Lcy1g1083 | Lcy-Chr1:9836176 | 4.07E-134 | dispersed | |
| Lcy9g1712 | Lcy-Chr9:42338049 | Lcy1g1081 | Lcy-Chr1:9814478 | 4.20E-08 | dispersed | |
| Lcy1g1081 | Lcy-Chr1:9814478 | Lcy1g1082 | Lcy-Chr1:9824479 | 2.33E-109 | tandem |
Pathway information