Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy1g1156 | ATGGCGACCATGAATTCCAGCGTTTTGGCCTGCAACTACGCCATTTCAGGCGCTGGATCGGCCGAGCTTAACTCCAAACTCAGCGCCGTGCCTTCTGTCGCATCGCCTGGGGTTTCTGGTTACAAGTTGCCTGCCATTAGGGCTCAACAGGCTAGGGTTCCTGAAGCCAAGAATGAAGGAAGGAGAACTGCGCTTCTTTTCCTTGGTGCTTCCCTCTTTGCTGCGGCTGCGGCTGCCTCCAACTCTTCTGCTAATGCTGGAGTCATTGAAGAGTACCTTGAGAAGAGTAAAGCTAACAAGGAATTGAATGACAAGAAGAGATTGGCAACAAGTGGAGCAAACTTTGCAAGGGCATACACTGTTGAGTTTGGATCATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCAAAGCAAAAGAAAGTTCCATTTATCTCTGATGATTTGGAATTGGAGTGTGAAGGGAAGGACAAGTACAAGTGTGGTTCCAATGTCTTCTGGAAATGGTGA | 516 | 48.45 | MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW | 171 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 10821127 | 10822753 | - | Maker00012955 | Lcy1g1156 | 623068 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy1g1156 | 171 | FunFam | Photosystem I reaction center subunit N | 87 | 171 | - | - | |
Lcy1g1156 | 171 | Pfam | Photosystem I reaction centre subunit N (PSAN or PSI-N) | 43 | 171 | IPR008796 | GO:0009522(InterPro)|GO:0015979(InterPro) | |
Lcy1g1156 | 171 | Gene3D | - | 87 | 171 | IPR044907 | - | |
Lcy1g1156 | 171 | PANTHER | PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC | 1 | 171 | IPR008796 | GO:0009522(InterPro)|GO:0015979(InterPro)|GO:0030093(PANTHER) |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy1g1156 | K02701 | - | csv:101204396 | 295.434 |