Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy1g1156 ATGGCGACCATGAATTCCAGCGTTTTGGCCTGCAACTACGCCATTTCAGGCGCTGGATCGGCCGAGCTTAACTCCAAACTCAGCGCCGTGCCTTCTGTCGCATCGCCTGGGGTTTCTGGTTACAAGTTGCCTGCCATTAGGGCTCAACAGGCTAGGGTTCCTGAAGCCAAGAATGAAGGAAGGAGAACTGCGCTTCTTTTCCTTGGTGCTTCCCTCTTTGCTGCGGCTGCGGCTGCCTCCAACTCTTCTGCTAATGCTGGAGTCATTGAAGAGTACCTTGAGAAGAGTAAAGCTAACAAGGAATTGAATGACAAGAAGAGATTGGCAACAAGTGGAGCAAACTTTGCAAGGGCATACACTGTTGAGTTTGGATCATGCAAGTTCCCAGAGAACTTCACAGGGTGCCAAGATCTTGCAAAGCAAAAGAAAGTTCCATTTATCTCTGATGATTTGGAATTGGAGTGTGAAGGGAAGGACAAGTACAAGTGTGGTTCCAATGTCTTCTGGAAATGGTGA 516 48.45 MATMNSSVLACNYAISGAGSAELNSKLSAVPSVASPGVSGYKLPAIRAQQARVPEAKNEGRRTALLFLGASLFAAAAAASNSSANAGVIEEYLEKSKANKELNDKKRLATSGANFARAYTVEFGSCKFPENFTGCQDLAKQKKVPFISDDLELECEGKDKYKCGSNVFWKW 171
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10821127 10822753 - Maker00012955 Lcy1g1156 623068
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy1g1156 171 FunFam Photosystem I reaction center subunit N 87 171 - -
Lcy1g1156 171 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 43 171 IPR008796 GO:0009522(InterPro)|GO:0015979(InterPro)
Lcy1g1156 171 Gene3D - 87 171 IPR044907 -
Lcy1g1156 171 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT N, CHLOROPLASTIC 1 171 IPR008796 GO:0009522(InterPro)|GO:0015979(InterPro)|GO:0030093(PANTHER)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy1g1156 K02701 - csv:101204396 295.434