Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy1g1264 | ATGCACTCCACGAACGCCGCCTTGCGCTGCCGCTGCATACCCACGAACGTTGCTTCCAATCGAACGCCGAACGCCACCTCCAATCAAACGCGATACGAACCCACGAACGGAGATCTGAACAGAGAGGGGAGAAACGAACAGGGATTCTTACTAGAGGAAAAACGAAATGAAATGAGAGGGTTTGTATCGCGTGCTCGAAATGGTGCTCAAACAGGGGAAAAACGAAATGATAAAAGAGGATCTGCATCCCCTCTGCATTCAGATCTCCGTTTGTGGGTTTGTATCGCGTTCGGCGTTCGTGGGTATGCAGGCGACGGCGCAAGGCGGCGTTCGTGGAGGGATCAGGACGGTGTCGTTTCGGTGTTTCCGAGCAGAAAGCAGAGAGTTCTAACGACGAGATCGTGGGACTTTCTGGGACTGAATCATCGCTCCAAACGCAACCCTAAAATCGAGTCTAATATCATCGTCGCCGTTTTGGATACGGGAATTTGGATAAATAGTCCTAGTTTCAGCGATGAAGGTTACGGTCCACCTCCGCCTAAATGGAAGGGCAAATGCGTCACTGGTCCCAACTTCACCGCCTGCAACAACAAAGTGATCGGTGCGAATTACTTCGATCTCGACAACGGAAGCACATATCCAGAGACCAGCGTCGCCGACACGGTGGGGCATGGCTCTCACACGGCGTCCACGGTCGCAGGCTCGGCGGTGCCCGGGGCCAGCTTGTACGGTCTGGCAAAAGGGACGGCCCGCGGCGGCGTCCCTTCGGCTCGAATTGCTGTCTACAAAGTGTGCTGGAGTGTTTTCTGCAGCGAAATGGACGTACTTGCAGGCTTCGATGAGGCCATCGCCGACGGCGTCGATTTGATTTCCGTCTCCATAGGCTCGCCGGCGATGGACTTCTTCAGGGACAGTCAGGCCATCGGGGCTTTTCATGCGATGAAGAAGGGAATTTTGACGTCCTGCGCCGCCGGCAACGACGGCCCTGAATTGTCCACCGTCGAGAATGTCGCCCCCTGGATTATGACCGTCGCTGCAACCGCCATTGATAGACGATTCGTCACTGCTTTCAAACTCGGTAATGGCAAGAAATTTACTGGATTCTCCATCAACACTTTCTCGCCCAGGAAACAAATGTACTCTCTTACAAGTGGGGCCAAAGCGTCCTCTGGCACAACCAACCAGGGGAACGCAAGGTACGAAATTCGGAAAAATACATTTTTTTTGAAATGGGATGACAGTGCTTGTGATGTTGAAGCTCTAAGCCAAAGCAAGGTGAAGGGAAGGATAGTGTATTGCTTGAAACCTTATACAGATCCCAACATCGAATCCTTAGGAGGCTCTGGAGTCCTTCAACTGCTTGATCAACAAATGGATTATTCCTCCCTTTTGCTTCTTCCTGGGGCTGCCATCCCTCCAGTCTCTGGCAAATATATTGATCTTTACATCAACTCCACCAAGAATCCAAAAGCTGTCATTTATAAAAGTAAAACCATCAAAACTGCTGCTCCTTTTGTTGCCTCTTTCTCATCCAGAGGGCCTCAGTCTATCAGCCGTAACATCCTCAAGCCTGATCTTGCTGCACCAGGGATAAACATCTTGGCTGCTTACACAAAGTTGGCCAGTTTGACAGGGCAAATGTCAGACAGTAGATATAGTTTATACAGTGTACTCTCAGGTACATCCATGGCTTGTCCTCATGCCACTGCCGCCGCTGCCTATGTTAAGTCATTCCACCCTGACTGGTCTCCGGCTGCGGTCAAGTCTGCTCTCATGACTACCGCAACTCCGATGAAGATCAAATCCAAGGATGCTGAGTTTGGCTCTGGAGCAGGACAAATAAATCCAACCAAGGCGGTCCATCCTGGCCTTGTCTATGACATTTCGCTCAAGTCGTACATCTCTTTCCTCTGCAAAGAAGGCTACAACAGCACAACAATTGGCTTACTTGTTGGTAGCAAGAAGTATAACTGCTCCAAGATCAAACCTGCACAAGGCACCGATGGACTCAACTACCCTACAATGCACAAACAACTCTTAGATCCTAGTTCTTCCATTGCGGCAGTCTTTTATCGGACAGTGACTCATGTCGGGTACGGTACATCATTGTACAGGGCAAATATATCATCCCCAGATGGCCTCTCTGTCAAAGTTTTTCCAAACACTCTAAATTTTGTTAAGTTACATGAAAGTAAGACATTTAAAGTTGTGGTGAAGGGCAAACCTATGCCAGATGGAACACAGATTCTATCAGCTTTACTTGAATGGAACGACTCTAAACACATAGTTAGAAGCAATATCGTCATCTACAGACAGTTATTCATGTAA | 2328 | 49.18 | MHSTNAALRCRCIPTNVASNRTPNATSNQTRYEPTNGDLNREGRNEQGFLLEEKRNEMRGFVSRARNGAQTGEKRNDKRGSASPLHSDLRLWVCIAFGVRGYAGDGARRRSWRDQDGVVSVFPSRKQRVLTTRSWDFLGLNHRSKRNPKIESNIIVAVLDTGIWINSPSFSDEGYGPPPPKWKGKCVTGPNFTACNNKVIGANYFDLDNGSTYPETSVADTVGHGSHTASTVAGSAVPGASLYGLAKGTARGGVPSARIAVYKVCWSVFCSEMDVLAGFDEAIADGVDLISVSIGSPAMDFFRDSQAIGAFHAMKKGILTSCAAGNDGPELSTVENVAPWIMTVAATAIDRRFVTAFKLGNGKKFTGFSINTFSPRKQMYSLTSGAKASSGTTNQGNARYEIRKNTFFLKWDDSACDVEALSQSKVKGRIVYCLKPYTDPNIESLGGSGVLQLLDQQMDYSSLLLLPGAAIPPVSGKYIDLYINSTKNPKAVIYKSKTIKTAAPFVASFSSRGPQSISRNILKPDLAAPGINILAAYTKLASLTGQMSDSRYSLYSVLSGTSMACPHATAAAAYVKSFHPDWSPAAVKSALMTTATPMKIKSKDAEFGSGAGQINPTKAVHPGLVYDISLKSYISFLCKEGYNSTTIGLLVGSKKYNCSKIKPAQGTDGLNYPTMHKQLLDPSSSIAAVFYRTVTHVGYGTSLYRANISSPDGLSVKVFPNTLNFVKLHESKTFKVVVKGKPMPDGTQILSALLEWNDSKHIVRSNIVIYRQLFM | 775 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 11957413 | 11962151 | + | Maker00013308 | Lcy1g1264 | 623176 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy1g1264 | 775 | Pfam | Fibronectin type-III domain | 670 | 769 | IPR041469 | - | |
Lcy1g1264 | 775 | SUPERFAMILY | Subtilisin-like | 140 | 620 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Lcy1g1264 | 775 | ProSitePatterns | Serine proteases, subtilase family, aspartic acid active site. | 156 | 166 | IPR023827 | - | |
Lcy1g1264 | 775 | MobiDBLite | consensus disorder prediction | 60 | 84 | - | - | |
Lcy1g1264 | 775 | Gene3D | - | 637 | 772 | - | - | |
Lcy1g1264 | 775 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 113 | 767 | IPR045051 | - | |
Lcy1g1264 | 775 | PRINTS | Subtilisin serine protease family (S8) signature | 220 | 233 | IPR015500 | - | |
Lcy1g1264 | 775 | PRINTS | Subtilisin serine protease family (S8) signature | 151 | 170 | IPR015500 | - | |
Lcy1g1264 | 775 | PRINTS | Subtilisin serine protease family (S8) signature | 559 | 575 | IPR015500 | - | |
Lcy1g1264 | 775 | Gene3D | Peptidase S8/S53 domain | 153 | 633 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
Lcy1g1264 | 775 | MobiDBLite | consensus disorder prediction | 70 | 84 | - | - | |
Lcy1g1264 | 775 | MobiDBLite | consensus disorder prediction | 17 | 43 | - | - | |
Lcy1g1264 | 775 | Pfam | Subtilase family | 152 | 610 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
Lcy1g1264 | 775 | MobiDBLite | consensus disorder prediction | 17 | 36 | - | - | |
Lcy1g1264 | 775 | CDD | Peptidases_S8_3 | 131 | 596 | IPR034197 | - | |
Lcy1g1264 | 775 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 560 | 570 | IPR023828 | - | |
Lcy1g1264 | 775 | CDD | PA_subtilisin_like | 357 | 493 | - | - | |
Lcy1g1264 | 775 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 134 | 620 | - | - | |
Lcy1g1264 | 775 | Gene3D | - | 350 | 499 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy1g1264 | Lcy-Chr1:11957413 | Lcy7g1237 | Lcy-Chr7:15436047 | 1.81E-222 | dispersed | |
Lcy1g1264 | Lcy-Chr1:11957413 | Lcy9g0404 | Lcy-Chr9:11378610 | 7.28E-181 | transposed |
Pathway information
