Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy1g1385 ATGTCTCTTATCCCCACAAAATTTGTGTTTCTTCTATTCTCCTTTCTCCTCGTCTTCAATTTTGGATTGTTTTTGGTTGAACAACAACAGTCATGTGATGCATCTGTTTTGTTGGAGATGGAAAGAGAAGAAGGTGAGATTATTTCAGAGATGAAGTCTCCAAGGAGCTTTGGAATGAGGAATCTGAAATATGTTAACAAAATAAAACAAGTCCTTGAAAGTGAATGCCCCAACACTGTTTCTTGTGCTGATATTATGGCTCTTGCTGCAAGAGATGCCATTCTTCTGTTAGGGGGAGTGGAGATGGAAATGAAAACAGGGAGAAGAGATGGGAAAGAAAGCTATGAAGCAGTGGTGGAAGAATTCATTCCAAATCATAATGACTCTCTTCCATTGGTCCTTTCTCGCTTTCAAGATATTGGCATTGATGCTCAAGCTACCGTTGCTCTTTTAGGAGCACATTCAGTGGGTCGGGTCCACTGCGTGAATATAGTGAACCGGCTGTACCCGAGCGTGGACCCGAGTCTGGATCCGGATCATGCAGAGTACTTAAAACACAGGTGCCCGGACCCAAACCCGGACCCGAAGGCCGTGGAATACGCGAGGAACGATTTGGAAACGCCGATGGTGCTGGACAACAACTACTACAAAAACGTATTGGGCCACAAGGCCCTTTTGTTGGTGGACCAACAATTGGGCTCGAGCCCAATAACTCTTCCTTATGTCCAATACATGGCCTCCAATAACAGTTACTTCCTCGACCAATTTGCTAGGGCTGTGCTCTTGTTGTCGGAGAACAACCCTCTCACCGATGAAGAAGGAGAGATTAGAAAGGATTGTCGACATGTCAATCATTAA 858 44.76 MSLIPTKFVFLLFSFLLVFNFGLFLVEQQQSCDASVLLEMEREEGEIISEMKSPRSFGMRNLKYVNKIKQVLESECPNTVSCADIMALAARDAILLLGGVEMEMKTGRRDGKESYEAVVEEFIPNHNDSLPLVLSRFQDIGIDAQATVALLGAHSVGRVHCVNIVNRLYPSVDPSLDPDHAEYLKHRCPDPNPDPKAVEYARNDLETPMVLDNNYYKNVLGHKALLLVDQQLGSSPITLPYVQYMASNNSYFLDQFARAVLLLSENNPLTDEEGEIRKDCRHVNH 285
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 13414689 13416149 + Maker00012752 Lcy1g1385 623297
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy1g1385 285 ProSiteProfiles Plant heme peroxidase family profile. 30 284 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy1g1385 285 CDD secretory_peroxidase 30 283 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Lcy1g1385 285 Gene3D Peroxidase, domain 2 124 263 - -
Lcy1g1385 285 SUPERFAMILY Heme-dependent peroxidases 30 284 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy1g1385 285 Pfam Peroxidase 30 248 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy1g1385 285 PRINTS Haem peroxidase superfamily signature 98 110 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy1g1385 285 PRINTS Haem peroxidase superfamily signature 204 219 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy1g1385 285 PRINTS Haem peroxidase superfamily signature 80 97 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy1g1385 285 PRINTS Haem peroxidase superfamily signature 146 161 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy1g1385 285 PRINTS Plant peroxidase signature 79 89 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy1g1385 285 PRINTS Plant peroxidase signature 218 235 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy1g1385 285 PRINTS Plant peroxidase signature 60 73 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy1g1385 285 PRINTS Plant peroxidase signature 145 157 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy1g1385 285 PRINTS Plant peroxidase signature 202 217 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy1g1385 285 PRINTS Plant peroxidase signature 98 113 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy1g1385 285 PANTHER - 30 284 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lcy1g1385 285 FunFam Peroxidase 124 263 - -
Lcy1g1385 285 Gene3D - 30 284 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy1g1385 Lcy-Chr1:13414689 Lcy5g2024 Lcy-Chr5:43257386 6.66E-103 dispersed
Lcy1g1385 Lcy-Chr1:13414689 Lcy5g0277 Lcy-Chr5:2596675 5.56E-117 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy1g1385 K00430 - csv:101221151 440.269