Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy1g1468 ATGGCGGCGATCTTCATCTTCACGCTAATTCTTTCAATACTCATTTCTTTCGTTTTCGGAGCTTCAGAAGATCTCAGCTTCACCTTCAATGGCTTCCGCTCCGGCAATCTCAGCCTCGAAGGCGTCGCTGAAGTAACCTCCAACGGCCTTTTGAAGCTCACCAACGACGTCGACCAGCAAATCGGCCACGCTTTTTACCCCAATTCCATTTCCTTCAAAAACCCATCAAACAATTCCTCAATTTTCTCCTTCTCTGCCACTTTCGTCTTCGCCATAAAACCTGAAATCGAAGACCTCGGCGGCCATGGAATTGCCTTCGTCGTTTCGCCGTCGATGGGTCTTCCGGGAGCTCGGCCCAGCGAAAGCCTCGGCCTGTTCAACGAGTCCAACGACGGGAACGAAACCAATCACATCTTCGCCGTCGAGCTCGACACGATACGGAATCTGGACCTTGAAGACATCAACGACAACCATGTCGGAATTAACATTAACAGCCTGGTATCAGTGCGGGCAGCGCCGGCGGGGTATTGGGTCGACGGCAAATTCAGGAATTTGAAGCTAATCAGCGGCGAACCGATGCAAGTTTGGGTGGAATACGATAGTTTCGAGAAACGAATCGATGTCACCATGGCTTCAATCGAGATCATCGAAAAACCCAAAACCCCCCTTTTGTCTTTGCGGCGGGATTTATCGTCGGTCATCAACGACGTCATGTACGTCGGATTCTCGTCGTCGACCGCCTCCATCACGACGTCGCATTACGTTCTGGCTGGAGCTTTCGCATCAATGGCGAAGCGCGGAGCCTTGCTCTCGGCTCTAATGGCAGTTTCCGGTGTACTTTACTTCTTTCATCGGAGGCGGAAATTCGCAGAGGTTCTAGAGGATTGGGAGCTCGAATACGGACCGCAGAGGTTCAAATACAAGGATCTATACATAGCCACAAAGGGATTCAGAGAGAGACAGTTTCTGGGATTCGGCGGATTCGGGCGAGTTTACAAAGGGGTTCTACCGAATTCGAAAATGGAAGTGGCCGTGAAGAAGATATCTCAGGAGTCGAGACAGGGGATGAAGGAATTCGTGGCGGAGATAGTGAGTGTAGGGCGGCTTCGGCACCGGAACCTGGTGGCGCTGCTGGGGTACTGCCGGCGGAAAGAGGAGCTGTTTCTGGTATACGATTACATGGCGAATGGAAGCTTGGATACGTACCTACACGAGTGGCCGGAGATGACGATAAATTGGGAGCAGAGATTTGAGATAATAAAAGGGGTTGCGTCGGGGCTGTTTTATTTGCACGAACAGTGCGAGAAAGTTGTGATTCATAGAGATGTGAAGGCGAGTAATGTGTTGCTTGACGCAGAGTTCAATGGGAGATTGGGGGATTTTGGTTTGGCCAAAATGCATGACCGTGGCGCTGATCCGAGAACCACCCACGTCGTTGGAACTCTTGGGTATCTAGCACCAGAGCACATAAGAACAGGGAGAGCCACGACGAGAACAGACGTATACGCATTCGGAGCATTTCTTCTCGAAGTCGCCTGCGGACGAAGGCCGATCCACCAGCAAGACGACGCCGACGATTTCATATTAGTGGATTGGGTCTACTCCTGTTGGGCAAACGGCAACATTCTACGAACCGCCGACCCTAAATTGGGCGGCAATTTCGAACCTTCCGAGCTCGAATTGGTCCTCAAGCTTGGCTTGCTCTGTTCCCACTCCTCGCCCTCGGTTCGCCCCACCATGCGCCAGGTTTTGCAGTACTTGGAGGCCGATGCGCCGCTGCCCGAGCTCGCCTCGCTCCGGTGGCGGCTCTCCGGCAGTGGGTTCTTGAACTTGACGCTTCGCGACGGCGATGGCGATGGGTCGGATGACTTTGAGATGTCTTATCCGGTTTCGACGGAAAGGAATGTGACTAGTTTGTCGTCGGTTGCGGAGTCTATTCTGTCCGATGGCCGCTGA 1956 52.66 MAAIFIFTLILSILISFVFGASEDLSFTFNGFRSGNLSLEGVAEVTSNGLLKLTNDVDQQIGHAFYPNSISFKNPSNNSSIFSFSATFVFAIKPEIEDLGGHGIAFVVSPSMGLPGARPSESLGLFNESNDGNETNHIFAVELDTIRNLDLEDINDNHVGININSLVSVRAAPAGYWVDGKFRNLKLISGEPMQVWVEYDSFEKRIDVTMASIEIIEKPKTPLLSLRRDLSSVINDVMYVGFSSSTASITTSHYVLAGAFASMAKRGALLSALMAVSGVLYFFHRRRKFAEVLEDWELEYGPQRFKYKDLYIATKGFRERQFLGFGGFGRVYKGVLPNSKMEVAVKKISQESRQGMKEFVAEIVSVGRLRHRNLVALLGYCRRKEELFLVYDYMANGSLDTYLHEWPEMTINWEQRFEIIKGVASGLFYLHEQCEKVVIHRDVKASNVLLDAEFNGRLGDFGLAKMHDRGADPRTTHVVGTLGYLAPEHIRTGRATTRTDVYAFGAFLLEVACGRRPIHQQDDADDFILVDWVYSCWANGNILRTADPKLGGNFEPSELELVLKLGLLCSHSSPSVRPTMRQVLQYLEADAPLPELASLRWRLSGSGFLNLTLRDGDGDGSDDFEMSYPVSTERNVTSLSSVAESILSDGR 651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 14238402 14241421 - Maker00013471 Lcy1g1468 623380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy1g1468 651 FunFam L-type lectin-domain containing receptor kinase S.4 394 600 - -
Lcy1g1468 651 SMART serkin_6 317 587 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy1g1468 651 Gene3D Transferase(Phosphotransferase) domain 1 394 600 - -
Lcy1g1468 651 ProSiteProfiles Protein kinase domain profile. 317 596 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy1g1468 651 CDD lectin_legume_LecRK_Arcelin_ConA 25 262 IPR001220 GO:0030246(InterPro)
Lcy1g1468 651 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 261 IPR013320 -
Lcy1g1468 651 Gene3D - 22 273 - -
Lcy1g1468 651 FunFam L-type lectin-domain containing receptor kinase V.9 24 266 - -
Lcy1g1468 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 438 450 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy1g1468 651 ProSitePatterns Protein kinases ATP-binding region signature. 323 347 IPR017441 GO:0005524(InterPro)
Lcy1g1468 651 CDD STKc_IRAK 323 588 - -
Lcy1g1468 651 PANTHER - 28 599 IPR050528 GO:0002229(PANTHER)|GO:0004675(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER)
Lcy1g1468 651 Gene3D Phosphorylase Kinase; domain 1 302 393 - -
Lcy1g1468 651 FunFam Lectin-domain containing receptor kinase A4.3 302 393 - -
Lcy1g1468 651 SUPERFAMILY Protein kinase-like (PK-like) 298 592 IPR011009 -
Lcy1g1468 651 Pfam Legume lectin domain 25 263 IPR001220 GO:0030246(InterPro)
Lcy1g1468 651 Pfam Protein kinase domain 319 585 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy1g1468 Lcy-Chr1:14238402 Lcy5g0187 Lcy-Chr5:1859285 5.84E-269 dispersed
Lcy1g1468 Lcy-Chr1:14238402 Lcy1g1469 Lcy-Chr1:14279036 1.58E-193 tandem
Lcy13g0459 Lcy-Chr13:5480749 Lcy1g1468 Lcy-Chr1:14238402 6.71E-72 transposed
Lcy1g1468 Lcy-Chr1:14238402 Lcy5g0186 Lcy-Chr5:1847371 1.06E-210 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65667 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy1g1468 - - - 0.0