Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy1g1495 ATGGCGGAAGGACTGCAGGTGATTGGTTCCTGGGCAAGTCCCTTTAGCCGGCGAGTGGAGTTGGCTCTCAAACTCAAAGCCCTAAGATACCTATATATTGAGGAAAACTTGACCAACAAGAGCCATTTGCTTCTGAAATACAACCCACTCCACAAGAAGGTGCCTGTCCTCGTCCACAATGGCAAACCCATTGCAGAGTCTCTTGTCATCCTCGAATACATTGATGAAATTTGGAAAGCCAACCCCATCTTGCCCCAACATCCCCATCAAAGAGCTCAAGGAAGATTCTGGGCCAAGTATATTGACGACAAGTTTTTTTCTGCGTGGCGGAAGACTGTTCGAAGTCAAGGAGACGAGAGAGAGAAGGCGGTAGGGGAAGCATGTAAGGCGTTGGAACCACTTGAGAATGAGCTCAAAAGCAACAAGTTCTTTGGAGGAGACAGCATCGGGTTGGTGGACATTGTTGGCATCTTCATAGGCTACTGGGTTCCTGTCATGCAACAAGCTCTTGGGTTTCAGATTCTGAGCAGCCACAAGTTTCCAAACTTAACCAAATGGAGTGAAGAGCTTATGAACCACAGCGTCGTCAAGGAGGTTCTGCCTCCAAAAGATAGCCTTTTTGCTTATACTCAAACTCATTATAAAAGAAATGTCGGTTCTAAGCTGTATTTACCTGAGAATCGCAAAAGATGCAGAAGCAAAGATTTATCAAGAAATGTAAAAGAAAACGCAAAAGATGAAGAAGCAAAGATGAAGAAACGAAGAACAAAGAAATCGCGGATGAAAGCAGGAAAATCGAGAGAAAAAGAGCACCGAAACCCAGTTGAAACCGTTGCCATCGAAGACCTCGGGTTCGCTGGAAAATGCTCGTCGTTGCTCTGA 882 45.35 MAEGLQVIGSWASPFSRRVELALKLKALRYLYIEENLTNKSHLLLKYNPLHKKVPVLVHNGKPIAESLVILEYIDEIWKANPILPQHPHQRAQGRFWAKYIDDKFFSAWRKTVRSQGDEREKAVGEACKALEPLENELKSNKFFGGDSIGLVDIVGIFIGYWVPVMQQALGFQILSSHKFPNLTKWSEELMNHSVVKEVLPPKDSLFAYTQTHYKRNVGSKLYLPENRKRCRSKDLSRNVKENAKDEEAKMKKRRTKKSRMKAGKSREKEHRNPVETVAIEDLGFAGKCSSLL 293
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 14672709 14677457 - Maker00012989 Lcy1g1495 623407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy1g1495 293 Pfam Glutathione S-transferase, C-terminal domain 99 193 IPR004046 -
Lcy1g1495 293 SFLD Main.3: Omega- and Tau-like 3 216 IPR045073 -
Lcy1g1495 293 SFLD Main (cytGST) 3 216 - -
Lcy1g1495 293 SUPERFAMILY Thioredoxin-like 7 106 IPR036249 -
Lcy1g1495 293 SUPERFAMILY GST C-terminal domain-like 76 215 IPR036282 -
Lcy1g1495 293 Gene3D Glutaredoxin 1 83 - -
Lcy1g1495 293 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Lcy1g1495 293 FunFam Tau class glutathione S-transferase 84 220 - -
Lcy1g1495 293 MobiDBLite consensus disorder prediction 234 253 - -
Lcy1g1495 293 CDD GST_C_Tau 88 209 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Lcy1g1495 293 FunFam Tau class glutathione S-transferase 1 86 - -
Lcy1g1495 293 MobiDBLite consensus disorder prediction 234 275 - -
Lcy1g1495 293 Pfam Glutathione S-transferase, N-terminal domain 9 76 IPR004045 -
Lcy1g1495 293 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 211 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Lcy1g1495 293 CDD GST_N_Tau 5 78 - -
Lcy1g1495 293 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 87 212 IPR010987 -
Lcy1g1495 293 Gene3D - 84 220 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy1g1495 Lcy-Chr1:14672709 Lcy1g1517 Lcy-Chr1:14949582 1.22E-105 dispersed
Lcy1g1495 Lcy-Chr1:14672709 Lcy1g1496 Lcy-Chr1:14683740 1.27E-93 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy1g1495 K00799 - csv:105435246 269.24