Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy1g1745 | ATGGAAATTAGTCCTCCTATGTCTGTCTACTGCATTGATCTGTGTTATCTATATGTCTGTCTAGCATTCAGCTTCCTTTGGGATCCAACCACAAACTTCTCCTCCCGTACATTCTATTCGGTGAATTTAATGAAAACATTTTGTTTGTCAGACAGAAAGACAGCTCTCATTCTCTCTCTAGAGAGAGAGAGAGAGAGAAACAAAGAACTTTATAGTACCTTTGAGAACACTGAATATTCAAAATTCACAATGAAAATATTACTGCAGGGGCGTTTCAGATATCAACCAGGCCAGGTTAGAGCATTTGGGATGCTCGCTGGAGGCTCTGGCATTACTCCTATGTATCAAGTTGCTCGAGCAATATTAGAAAATCCAAATGACAAGACAAAGGTACATCTCATTTATGCCAATGTCACGTACGAGGACATTCTTTTAAAGGAGGAGTTGGATCTTCTTGCCACAAGGTACCCAGATAGCTTCAAGCTCTATTATGTCTTAAACCAGCCTCCGGAAGAGTGGGATGGCGGTGTCGGATTCGTATCGAAGGAAATGATTCAAACCCATTGCCCTGCTCCCGCATCCGATGTTCAGATTTTAAGATGTGGGCCACCCCCAATGAACAAGGCTATGGCTGCTCATCTTGAAGCTCTTGGATATCAACCTGAGATGCTGTTCATGTTCTGA | 684 | 42.54 | MEISPPMSVYCIDLCYLYVCLAFSFLWDPTTNFSSRTFYSVNLMKTFCLSDRKTALILSLERERERNKELYSTFENTEYSKFTMKILLQGRFRYQPGQVRAFGMLAGGSGITPMYQVARAILENPNDKTKVHLIYANVTYEDILLKEELDLLATRYPDSFKLYYVLNQPPEEWDGGVGFVSKEMIQTHCPAPASDVQILRCGPPPMNKAMAAHLEALGYQPEMLFMF | 227 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 18443871 | 18449958 | - | Maker00013203 | Lcy1g1745 | 623657 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy1g1745 | 227 | PRINTS | Cytochrome B5 reductase signature | 141 | 152 | - | - | |
Lcy1g1745 | 227 | PRINTS | Cytochrome B5 reductase signature | 103 | 122 | - | - | |
Lcy1g1745 | 227 | PRINTS | Cytochrome B5 reductase signature | 197 | 205 | - | - | |
Lcy1g1745 | 227 | Gene3D | - | 79 | 227 | IPR039261 | - | |
Lcy1g1745 | 227 | PRINTS | Flavoprotein pyridine nucleotide cytochrome reductase signature | 141 | 152 | IPR001709 | GO:0016491(InterPro) | |
Lcy1g1745 | 227 | PRINTS | Flavoprotein pyridine nucleotide cytochrome reductase signature | 197 | 205 | IPR001709 | GO:0016491(InterPro) | |
Lcy1g1745 | 227 | PRINTS | Flavoprotein pyridine nucleotide cytochrome reductase signature | 103 | 122 | IPR001709 | GO:0016491(InterPro) | |
Lcy1g1745 | 227 | PANTHER | NADH-CYTOCHROME B5 REDUCTASE | 90 | 227 | IPR001834 | GO:0004128(PANTHER)|GO:0016491(InterPro)|GO:0022900(PANTHER) | |
Lcy1g1745 | 227 | FunFam | NADH-cytochrome b5 reductase | 87 | 227 | - | - | |
Lcy1g1745 | 227 | Pfam | Oxidoreductase NAD-binding domain | 104 | 210 | IPR001433 | GO:0016491(InterPro) | |
Lcy1g1745 | 227 | CDD | cyt_b5_reduct_like | 89 | 227 | - | - | |
Lcy1g1745 | 227 | SUPERFAMILY | Ferredoxin reductase-like, C-terminal NADP-linked domain | 90 | 226 | IPR039261 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy1g1745 | Lcy-Chr1:18443871 | Lcy8g2198 | Lcy-Chr8:48074655 | 1.25E-64 | dispersed | |
Lcy1g1745 | Lcy-Chr1:18443871 | Lcy5g0764 | Lcy-Chr5:11200692 | 3.21E-84 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy1g1745 | K00326 | - | csv:101212569 | 267.7 |