Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0007 ATGCAACACCATAGAGATAGGGTTAAGTTGGTACTTGAAATACATACAAAACAACCACCTCCCTGCACTGCACAGCGCAGCGCAGCAGACAGCACTGCCCATATTTTATATTTATATCGGCTGCGCCAGAGCCACCTAGTTAGTTATGCAAACGCTGTTGAAGAAGTTGCTGAGTTTCTGAGGATGTCCCTTCCAACCCACCCCTTGCTCTTGTTTTCTTTCTCTGTGGCCTCTTGTCTCCTGAGTCCTGTTGAGTTGAGATTTGAGACCCCAGGCCCAAGCAAAGGAAGGTCGCAAAAGGGGCGACAGGTTGCATTGTTTGTAGTCGTGTACCCTACACATACACATATACACAAACACATACACTACGCTAGCACTAGCGTTAGCACTAAATATCCAATTCCGCAAATGGATCCAGAAGCCCTCTCCGCCACTTTGTTCAAATGGGATCCTCGAGGAATCGTGGGGGGAGGCGGCGGTGCACCTCTCCCAGCACCACTACCGCCCTACTCGCTGCGGCCCAGGGAGTTGGGACTGGGAGGCCTGGAGGACTTGTTCCAGGCTTACGGTATCAGGTACTACACCGCCGCTAAAATTGCGGAACTCGGTTTCACCGTCAGCACCCTCCTGGACATGAAAGATGAAGAGTTGGAGGACATGATGAACAGCCTCTCTCACATTTTCCGCTGGGAGCTTCTGGTCGGTGAGAGGTACGGAATTAAGGCTGCTGTAAGAGCCGAGCGCAGACGTCTAGATGACGAGATCGACTCCTCAAGGCGCCGTCACGTCTTGTCCAACGACACCACTACCAACGTAGTCCTCGATGCCCTTTCTCAGGAAGGGCTATCGGAAGAGCCGGTGCAGCAGGAGAAGGAGGTGGTGGGGAGCGGAGGAGGAGGAACGTGGGAGGCAGTTGCAGCGGCTGAAATCAGGAAGAAGCAGCGGAGGAGAAATGGATCAAAGAAGAAGCAGGTGATGGTGATGGAGGAGGATCACGATGAAAACGAGGGAGCTGGGGACGAGGAGGATATTATGGAAGTCAGCGAGAGACAGCGAGAGCATCCATTCATCGTAACCGAGCCAGGGGAGGTTGCACGGGGGAAAAAGAACGGCCTGGACTATCTCTTCCACCTCTATGAGCAGTGTCGTGAATTTTTGATCCAAGTCCAGAACATTGCCAAGGAACGAGGAGAAAAATGCCCTACGAAGGTGACGAACCAGGTGTTTAGATATGCGAAGAAAGCGGGAGCAAGTTACATAAACAAGCCAAAAATGAGACACTACGTGCACTGCTATGCCCTGCATTGTCTGGACGAGGAAGCGTCAAACGCACTGAGGAGGGTTTTCAAAGAGAGGGGTGAAAATGTGGGAGCTTGGCGACAGGCATGCTATAAGCCTCTGGTAGCCATAGCAGCTGCCCAAGGTTGGGACATCGATGCCATTTTCAACGCACATCCACGCCTCGCCATTTGGTATGTGCCTACCAAACTCCGACAACTCTGCCACACCGAGCGCAACAGTGCCACAGCCTCCACCGCGGCTGCCGCCGATCACTTGCCTTTTTAA 1566 52.75 MQHHRDRVKLVLEIHTKQPPPCTAQRSAADSTAHILYLYRLRQSHLVSYANAVEEVAEFLRMSLPTHPLLLFSFSVASCLLSPVELRFETPGPSKGRSQKGRQVALFVVVYPTHTHIHKHIHYASTSVSTKYPIPQMDPEALSATLFKWDPRGIVGGGGGAPLPAPLPPYSLRPRELGLGGLEDLFQAYGIRYYTAAKIAELGFTVSTLLDMKDEELEDMMNSLSHIFRWELLVGERYGIKAAVRAERRRLDDEIDSSRRRHVLSNDTTTNVVLDALSQEGLSEEPVQQEKEVVGSGGGGTWEAVAAAEIRKKQRRRNGSKKKQVMVMEEDHDENEGAGDEEDIMEVSERQREHPFIVTEPGEVARGKKNGLDYLFHLYEQCREFLIQVQNIAKERGEKCPTKVTNQVFRYAKKAGASYINKPKMRHYVHCYALHCLDEEASNALRRVFKERGENVGAWRQACYKPLVAIAAAQGWDIDAIFNAHPRLAIWYVPTKLRQLCHTERNSATASTAAAADHLPF 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 72624 75392 + Maker00007471 Lcy2g0007 624772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0007 521 MobiDBLite consensus disorder prediction 313 341 - -
Lcy2g0007 521 Coils Coil 241 261 - -
Lcy2g0007 521 Gene3D Protein LEAFY 347 515 IPR038276 -
Lcy2g0007 521 PANTHER PROTEIN LEAFY 137 515 IPR002910 GO:0003677(InterPro)|GO:0006355(InterPro)
Lcy2g0007 521 Pfam DNA Binding Domain (C-terminal) Leafy/Floricaula 347 509 IPR035209 GO:0003677(InterPro)
Lcy2g0007 521 Pfam Floricaula / Leafy protein SAM domain 179 254 IPR035079 -
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
19659 None None None None Lcy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0007 - - - 0.0