Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy2g0017 | ATGAAGAGCCTGGCCTGTCAGGTTACAAATACTTTTCAGGAATCAGGCATGACCAAGACGAGAGGAGGCACGTCGTTGCCAAAGCCTAAGGCAAGATCTACGCCTTCCTCCAACACTGCACTTTCTGATCGAAGCATACCGTACTGGTTGAAAGCGAGGCCGCAGGCATACGCATACCTACGCTTCGCTTTTGCTTTTGAAGAAGACACTCTTTTCCGCTCCTCAACAATTTCCTTAAGCAATCTTCCCTTCTGTTATGGAAAAACACCATCACCATCACCATCATCTTCAACATCAGGTGCCCTTTCTCTTCCCTCTCTCCTTTTCTTACATCATTTCTTCCACCTCCCTTTTCTTTATGCGTTGCCGGAATACCAGGATATTAAGGACTTGGACTTGGATCTCGGATCCGACGAGCCTGACCTCGCCCCTCTCCCCCTCACCGTCACTTCCCGGGTGCTGCACATGTTGGGAGACATCGCAGCAGGTCCCGCTTACAGGTTTTCCCAATGGCTTGAACTCGTCCGTAAACGTAGCGGCAAACATCGCGCTTCTGGCTTCCACAACCGCCCTTTCGATATGCCTTTCGGTGCTGAGGAACTTGTCAATGAATCAATAAGTCTTCCAGCTCCCGAGCAATCAACTGAAACGAATTTGTGGGATAGACTCGCTAAAGCATCAATGATGGATATTGAGTCGAGCTCTTTTTCGTGGGATAGGCTTTTGTCTCTTCACCGCACCGAAAACAGTAGTAGCACTGAACATTCGGAAGATGAGATGAATAAAGCACTCGAGGTCACTGTAAATTCTGGTGGAGTGGTTTTCTTTGCACTCTTCAATCAGCTTGGTTATGACGATAATCTTCCAAAGGAAGCAGCTGCTGTTATAAAGATATCATCTTCAAGAATGGCCACGCAATCTGAACGCCTGGGTTATGAATTTGCTAAGTGGCTTGGGGTTCAAACTCCACAGGCTAGGGTTATTCATAATTCCAGCATGGAATGGCTCCAGATAAAAGAAGCTGCAGAGAAAGCACGAGATGTTGCCTGTTTGGAGGGTGATGAGGTTGGTGAAATGACATGTTCTGAACTATTGGAAGCACTTGAATTTAGCAGATGCCTTTTTCTGATGAGCTATGTACATGGGTCTCCTTTGTTAGAAAGCTCAAATGCATTTGAATCACGGGAAATAGCTGAAAAATTAGCCACTGCTATTGGAAGGATCTTGTTATTGGACCTTGTCATCAGAAATGAAGATAGGCTCCCTTGTCGTCTTCTTCGTTGGCGTGGAAATTCCGCAAATCTGCTCATAGCTGATAGAATGACGTGTGTAAATATGAATACATTTGAGGAAGCTTTTGATTCAGCTATTAAGCGATATAGACCAAAAGTTGTTACAACACTTCAAAAAGAAAGAAGGGCAACTTCAGTGGACAATAGATCAAGTTCTAATTCAGGGCTGGTATTAGATGCCTCGGAACTTTGTGATATCGTTGAATCCCCTAAATCTAGTAACCTAAGTGTAAAAAGTCAAATATCAGATGAAACAACACCTTGTGATTTTAACATTGTGGCTATTGACTCCGGTGTTCCTCGTCGACCTCCAGCTGGAAAACGTTCTAATGACCAGTCAATTTACCCAAAGTTAGTTGAGTTGTTACTTAATAGTTCTGAGTTCTCCTCTAATCTATTACATGACATTACAGGAGGGAAATTAGGGTTCCCTTCATTAGCTGATGCCAGCTCAACTACTAATATGCAACTTACGGATATGAGTTCTATTGTCCATGAATTTCGGTATGGGTTTCGTGCTGCTCTTAGGGACTTGCAAGGATTTCACATATTTTTGCTTACACTCCACCAAAAGTTAGATAACTCATTACGAGCATTCTTGAATATCATAAATAAGTTCCCCTTGGGGGAATCCGATAAAGAGGATTCAGGGGTTCCTGAGTCCCATTTGCAGGGATCAACCACTATTCATTGTTTATCCCCACGTGGTAAGGAACGAACCTCTAGTGATAGTAATATGGATGTTACAGATTCTGCTCCAAGATCATCATCAGGAAATAAAGAAAGCTCAGACTTATCTTCTCCCTTGTCACGAGATAACTCACAAGGAAAGGCATACAAGGGAAGTGCAGAGCCCATTCATAGCCTTCGTCTAACTGCAAAACTGCGAGACTTCCATAAATTTGCCAAGGTTGATGCTGAATCAAATAAAGAATTGGATATGTGGAATGAAGTGCTAAAGAATGAAGCTGTTAAACTCTGCCAGGAGAACAAATTTAATACTGGGTTTTTTGAAGGCAGCGACAGTCATGGAGTTGTTGATGCTTATGAACTGAAGGTGAGACTTGAGCACATTCTTGAAAGGATTGCACTGATATCCGAGGCTGCAAATACAGAAAGGCCTTCTTCAGTTACAGCTTCCTTATTTATAGGCGGTGCCTTGGCTGCAAGATCTGTTTACACTCTTCAGCATCTAGGAGTCACTCATATTTTATGTCTCTGCTCAAATGAAATTGGCCAGTCAGATTCTCAGTTTCCTGATCTATTTGAATACAAAAATTTTTCAAACTACTCCAAAAGAGCTGTTTTCATTGACCGAAAAACCTTCTCCATATCTTTTGACACAAATTACCGTGGTAGTAGAGCAAAAATCAAAGAAAGTAGCCGATCATCCTCACACAGTCTCTCACTCACATGGAAGTCTCTCATCTGGTTGGCCTACTGTTTCAAATCACTTGCTGAAAGTCCCTGCTCCTACAAGTTTTTTTCAGAAGAACGAAGTGAGGACTATATCCTTTGTGTTGAAAGACTGAGGTACCAACATGGTTATTTTGCCGAAGTCATCCAATTGACAAACAATGGAGGAACAAGGAAACTATTGATACCATCAGACAATGAGAAAAGTGGTTGGTTCTCTTTCTTTTCCTTAATCTCAGACTATCTCGGAGAGGCATATAGGAAAACAAAATCAGCACCCAACATCAACATACAACCTATCCCTTCCTATAAGAAAAAATTGAAGCTGGGGCTAGGGAATGACGAAGTATTGGCACTACAAAGTCCGAAGAGCCCAAATAATGCCACACAGCCTGCACCAGAGAACAATAGAGAGCTTGCAGATTGGAAAGAAGTGATTATAGTTCAGCGATTTTCCAACCAAAATGACTGGCAATCAATAAAAGAGGCTATAATCAAGGATACTTTGAAACACTACTCTATAAACCCCTTCCAAGCCAACAAAGCTATCCTACACTGCTATGACCCAAGTATGGCAGCTAGCTTATGCAAAATGGACTGGAATTTGATTGGTGGTTTTAACATCAAGTTCTACCCAATGAACCTCACGAACTACACCATGGAGAGGATGACCATATCTTATGGAGGATGGATTTCGATAAAAGATCTACCCATTTTCCTCTGGACCAACGACATCTTTTGA | 3450 | 42.35 | MKSLACQVTNTFQESGMTKTRGGTSLPKPKARSTPSSNTALSDRSIPYWLKARPQAYAYLRFAFAFEEDTLFRSSTISLSNLPFCYGKTPSPSPSSSTSGALSLPSLLFLHHFFHLPFLYALPEYQDIKDLDLDLGSDEPDLAPLPLTVTSRVLHMLGDIAAGPAYRFSQWLELVRKRSGKHRASGFHNRPFDMPFGAEELVNESISLPAPEQSTETNLWDRLAKASMMDIESSSFSWDRLLSLHRTENSSSTEHSEDEMNKALEVTVNSGGVVFFALFNQLGYDDNLPKEAAAVIKISSSRMATQSERLGYEFAKWLGVQTPQARVIHNSSMEWLQIKEAAEKARDVACLEGDEVGEMTCSELLEALEFSRCLFLMSYVHGSPLLESSNAFESREIAEKLATAIGRILLLDLVIRNEDRLPCRLLRWRGNSANLLIADRMTCVNMNTFEEAFDSAIKRYRPKVVTTLQKERRATSVDNRSSSNSGLVLDASELCDIVESPKSSNLSVKSQISDETTPCDFNIVAIDSGVPRRPPAGKRSNDQSIYPKLVELLLNSSEFSSNLLHDITGGKLGFPSLADASSTTNMQLTDMSSIVHEFRYGFRAALRDLQGFHIFLLTLHQKLDNSLRAFLNIINKFPLGESDKEDSGVPESHLQGSTTIHCLSPRGKERTSSDSNMDVTDSAPRSSSGNKESSDLSSPLSRDNSQGKAYKGSAEPIHSLRLTAKLRDFHKFAKVDAESNKELDMWNEVLKNEAVKLCQENKFNTGFFEGSDSHGVVDAYELKVRLEHILERIALISEAANTERPSSVTASLFIGGALAARSVYTLQHLGVTHILCLCSNEIGQSDSQFPDLFEYKNFSNYSKRAVFIDRKTFSISFDTNYRGSRAKIKESSRSSSHSLSLTWKSLIWLAYCFKSLAESPCSYKFFSEERSEDYILCVERLRYQHGYFAEVIQLTNNGGTRKLLIPSDNEKSGWFSFFSLISDYLGEAYRKTKSAPNINIQPIPSYKKKLKLGLGNDEVLALQSPKSPNNATQPAPENNRELADWKEVIIVQRFSNQNDWQSIKEAIIKDTLKHYSINPFQANKAILHCYDPSMAASLCKMDWNLIGGFNIKFYPMNLTNYTMERMTISYGGWISIKDLPIFLWTNDIF | 1149 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 159890 | 168727 | - | Maker00007674 | Lcy2g0017 | 624782 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy2g0017 | 1149 | Gene3D | - | 384 | 485 | IPR036940 | - | |
Lcy2g0017 | 1149 | Pfam | Actin-fragmin kinase, catalytic | 216 | 473 | IPR015275 | - | |
Lcy2g0017 | 1149 | PANTHER | DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 | 141 | 859 | IPR035010 | GO:0004721(InterPro)|GO:0009737(InterPro)|GO:0043622(InterPro) | |
Lcy2g0017 | 1149 | Gene3D | Protein tyrosine phosphatase superfamily | 787 | 874 | IPR029021 | - | |
Lcy2g0017 | 1149 | MobiDBLite | consensus disorder prediction | 15 | 40 | - | - | |
Lcy2g0017 | 1149 | MobiDBLite | consensus disorder prediction | 642 | 714 | - | - | |
Lcy2g0017 | 1149 | MobiDBLite | consensus disorder prediction | 651 | 666 | - | - | |
Lcy2g0017 | 1149 | SUPERFAMILY | Protein kinase-like (PK-like) | 170 | 543 | IPR011009 | - | |
Lcy2g0017 | 1149 | MobiDBLite | consensus disorder prediction | 676 | 708 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy2g0017 | Lcy-Chr2:159890 | Lcy5g2499 | Lcy-Chr5:47785974 | 1.13E-74 | dispersed | |
Lcy2g0017 | Lcy-Chr2:159890 | Lcy2g1278 | Lcy-Chr2:13747782 | 2.07E-78 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy2g0017 | K14165 | - | csv:101220184 | 1332.01 |