Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0017 ATGAAGAGCCTGGCCTGTCAGGTTACAAATACTTTTCAGGAATCAGGCATGACCAAGACGAGAGGAGGCACGTCGTTGCCAAAGCCTAAGGCAAGATCTACGCCTTCCTCCAACACTGCACTTTCTGATCGAAGCATACCGTACTGGTTGAAAGCGAGGCCGCAGGCATACGCATACCTACGCTTCGCTTTTGCTTTTGAAGAAGACACTCTTTTCCGCTCCTCAACAATTTCCTTAAGCAATCTTCCCTTCTGTTATGGAAAAACACCATCACCATCACCATCATCTTCAACATCAGGTGCCCTTTCTCTTCCCTCTCTCCTTTTCTTACATCATTTCTTCCACCTCCCTTTTCTTTATGCGTTGCCGGAATACCAGGATATTAAGGACTTGGACTTGGATCTCGGATCCGACGAGCCTGACCTCGCCCCTCTCCCCCTCACCGTCACTTCCCGGGTGCTGCACATGTTGGGAGACATCGCAGCAGGTCCCGCTTACAGGTTTTCCCAATGGCTTGAACTCGTCCGTAAACGTAGCGGCAAACATCGCGCTTCTGGCTTCCACAACCGCCCTTTCGATATGCCTTTCGGTGCTGAGGAACTTGTCAATGAATCAATAAGTCTTCCAGCTCCCGAGCAATCAACTGAAACGAATTTGTGGGATAGACTCGCTAAAGCATCAATGATGGATATTGAGTCGAGCTCTTTTTCGTGGGATAGGCTTTTGTCTCTTCACCGCACCGAAAACAGTAGTAGCACTGAACATTCGGAAGATGAGATGAATAAAGCACTCGAGGTCACTGTAAATTCTGGTGGAGTGGTTTTCTTTGCACTCTTCAATCAGCTTGGTTATGACGATAATCTTCCAAAGGAAGCAGCTGCTGTTATAAAGATATCATCTTCAAGAATGGCCACGCAATCTGAACGCCTGGGTTATGAATTTGCTAAGTGGCTTGGGGTTCAAACTCCACAGGCTAGGGTTATTCATAATTCCAGCATGGAATGGCTCCAGATAAAAGAAGCTGCAGAGAAAGCACGAGATGTTGCCTGTTTGGAGGGTGATGAGGTTGGTGAAATGACATGTTCTGAACTATTGGAAGCACTTGAATTTAGCAGATGCCTTTTTCTGATGAGCTATGTACATGGGTCTCCTTTGTTAGAAAGCTCAAATGCATTTGAATCACGGGAAATAGCTGAAAAATTAGCCACTGCTATTGGAAGGATCTTGTTATTGGACCTTGTCATCAGAAATGAAGATAGGCTCCCTTGTCGTCTTCTTCGTTGGCGTGGAAATTCCGCAAATCTGCTCATAGCTGATAGAATGACGTGTGTAAATATGAATACATTTGAGGAAGCTTTTGATTCAGCTATTAAGCGATATAGACCAAAAGTTGTTACAACACTTCAAAAAGAAAGAAGGGCAACTTCAGTGGACAATAGATCAAGTTCTAATTCAGGGCTGGTATTAGATGCCTCGGAACTTTGTGATATCGTTGAATCCCCTAAATCTAGTAACCTAAGTGTAAAAAGTCAAATATCAGATGAAACAACACCTTGTGATTTTAACATTGTGGCTATTGACTCCGGTGTTCCTCGTCGACCTCCAGCTGGAAAACGTTCTAATGACCAGTCAATTTACCCAAAGTTAGTTGAGTTGTTACTTAATAGTTCTGAGTTCTCCTCTAATCTATTACATGACATTACAGGAGGGAAATTAGGGTTCCCTTCATTAGCTGATGCCAGCTCAACTACTAATATGCAACTTACGGATATGAGTTCTATTGTCCATGAATTTCGGTATGGGTTTCGTGCTGCTCTTAGGGACTTGCAAGGATTTCACATATTTTTGCTTACACTCCACCAAAAGTTAGATAACTCATTACGAGCATTCTTGAATATCATAAATAAGTTCCCCTTGGGGGAATCCGATAAAGAGGATTCAGGGGTTCCTGAGTCCCATTTGCAGGGATCAACCACTATTCATTGTTTATCCCCACGTGGTAAGGAACGAACCTCTAGTGATAGTAATATGGATGTTACAGATTCTGCTCCAAGATCATCATCAGGAAATAAAGAAAGCTCAGACTTATCTTCTCCCTTGTCACGAGATAACTCACAAGGAAAGGCATACAAGGGAAGTGCAGAGCCCATTCATAGCCTTCGTCTAACTGCAAAACTGCGAGACTTCCATAAATTTGCCAAGGTTGATGCTGAATCAAATAAAGAATTGGATATGTGGAATGAAGTGCTAAAGAATGAAGCTGTTAAACTCTGCCAGGAGAACAAATTTAATACTGGGTTTTTTGAAGGCAGCGACAGTCATGGAGTTGTTGATGCTTATGAACTGAAGGTGAGACTTGAGCACATTCTTGAAAGGATTGCACTGATATCCGAGGCTGCAAATACAGAAAGGCCTTCTTCAGTTACAGCTTCCTTATTTATAGGCGGTGCCTTGGCTGCAAGATCTGTTTACACTCTTCAGCATCTAGGAGTCACTCATATTTTATGTCTCTGCTCAAATGAAATTGGCCAGTCAGATTCTCAGTTTCCTGATCTATTTGAATACAAAAATTTTTCAAACTACTCCAAAAGAGCTGTTTTCATTGACCGAAAAACCTTCTCCATATCTTTTGACACAAATTACCGTGGTAGTAGAGCAAAAATCAAAGAAAGTAGCCGATCATCCTCACACAGTCTCTCACTCACATGGAAGTCTCTCATCTGGTTGGCCTACTGTTTCAAATCACTTGCTGAAAGTCCCTGCTCCTACAAGTTTTTTTCAGAAGAACGAAGTGAGGACTATATCCTTTGTGTTGAAAGACTGAGGTACCAACATGGTTATTTTGCCGAAGTCATCCAATTGACAAACAATGGAGGAACAAGGAAACTATTGATACCATCAGACAATGAGAAAAGTGGTTGGTTCTCTTTCTTTTCCTTAATCTCAGACTATCTCGGAGAGGCATATAGGAAAACAAAATCAGCACCCAACATCAACATACAACCTATCCCTTCCTATAAGAAAAAATTGAAGCTGGGGCTAGGGAATGACGAAGTATTGGCACTACAAAGTCCGAAGAGCCCAAATAATGCCACACAGCCTGCACCAGAGAACAATAGAGAGCTTGCAGATTGGAAAGAAGTGATTATAGTTCAGCGATTTTCCAACCAAAATGACTGGCAATCAATAAAAGAGGCTATAATCAAGGATACTTTGAAACACTACTCTATAAACCCCTTCCAAGCCAACAAAGCTATCCTACACTGCTATGACCCAAGTATGGCAGCTAGCTTATGCAAAATGGACTGGAATTTGATTGGTGGTTTTAACATCAAGTTCTACCCAATGAACCTCACGAACTACACCATGGAGAGGATGACCATATCTTATGGAGGATGGATTTCGATAAAAGATCTACCCATTTTCCTCTGGACCAACGACATCTTTTGA 3450 42.35 MKSLACQVTNTFQESGMTKTRGGTSLPKPKARSTPSSNTALSDRSIPYWLKARPQAYAYLRFAFAFEEDTLFRSSTISLSNLPFCYGKTPSPSPSSSTSGALSLPSLLFLHHFFHLPFLYALPEYQDIKDLDLDLGSDEPDLAPLPLTVTSRVLHMLGDIAAGPAYRFSQWLELVRKRSGKHRASGFHNRPFDMPFGAEELVNESISLPAPEQSTETNLWDRLAKASMMDIESSSFSWDRLLSLHRTENSSSTEHSEDEMNKALEVTVNSGGVVFFALFNQLGYDDNLPKEAAAVIKISSSRMATQSERLGYEFAKWLGVQTPQARVIHNSSMEWLQIKEAAEKARDVACLEGDEVGEMTCSELLEALEFSRCLFLMSYVHGSPLLESSNAFESREIAEKLATAIGRILLLDLVIRNEDRLPCRLLRWRGNSANLLIADRMTCVNMNTFEEAFDSAIKRYRPKVVTTLQKERRATSVDNRSSSNSGLVLDASELCDIVESPKSSNLSVKSQISDETTPCDFNIVAIDSGVPRRPPAGKRSNDQSIYPKLVELLLNSSEFSSNLLHDITGGKLGFPSLADASSTTNMQLTDMSSIVHEFRYGFRAALRDLQGFHIFLLTLHQKLDNSLRAFLNIINKFPLGESDKEDSGVPESHLQGSTTIHCLSPRGKERTSSDSNMDVTDSAPRSSSGNKESSDLSSPLSRDNSQGKAYKGSAEPIHSLRLTAKLRDFHKFAKVDAESNKELDMWNEVLKNEAVKLCQENKFNTGFFEGSDSHGVVDAYELKVRLEHILERIALISEAANTERPSSVTASLFIGGALAARSVYTLQHLGVTHILCLCSNEIGQSDSQFPDLFEYKNFSNYSKRAVFIDRKTFSISFDTNYRGSRAKIKESSRSSSHSLSLTWKSLIWLAYCFKSLAESPCSYKFFSEERSEDYILCVERLRYQHGYFAEVIQLTNNGGTRKLLIPSDNEKSGWFSFFSLISDYLGEAYRKTKSAPNINIQPIPSYKKKLKLGLGNDEVLALQSPKSPNNATQPAPENNRELADWKEVIIVQRFSNQNDWQSIKEAIIKDTLKHYSINPFQANKAILHCYDPSMAASLCKMDWNLIGGFNIKFYPMNLTNYTMERMTISYGGWISIKDLPIFLWTNDIF 1149
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 159890 168727 - Maker00007674 Lcy2g0017 624782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0017 1149 Gene3D - 384 485 IPR036940 -
Lcy2g0017 1149 Pfam Actin-fragmin kinase, catalytic 216 473 IPR015275 -
Lcy2g0017 1149 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE PHS1 141 859 IPR035010 GO:0004721(InterPro)|GO:0009737(InterPro)|GO:0043622(InterPro)
Lcy2g0017 1149 Gene3D Protein tyrosine phosphatase superfamily 787 874 IPR029021 -
Lcy2g0017 1149 MobiDBLite consensus disorder prediction 15 40 - -
Lcy2g0017 1149 MobiDBLite consensus disorder prediction 642 714 - -
Lcy2g0017 1149 MobiDBLite consensus disorder prediction 651 666 - -
Lcy2g0017 1149 SUPERFAMILY Protein kinase-like (PK-like) 170 543 IPR011009 -
Lcy2g0017 1149 MobiDBLite consensus disorder prediction 676 708 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g0017 Lcy-Chr2:159890 Lcy5g2499 Lcy-Chr5:47785974 1.13E-74 dispersed
Lcy2g0017 Lcy-Chr2:159890 Lcy2g1278 Lcy-Chr2:13747782 2.07E-78 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0017 K14165 - csv:101220184 1332.01