Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0022 ATGGCCATCTCGAAAGATGCCCAACAATCTCTGATCCCAAGCTTTGTGTACTCTTCTGCTAAATGGGGGACGTCGACGAGTAGTTACGACAAGAGCTTCCCAATTATTGAAGCTCCAAAGGAGAAGATAAAGATGTACTCACCGGCCTTCTACGCAGCATGTACAGTAGGCGGCATTTTGAGTTGTGGACTTACCCACATGACCGTCACCCCCCTCGATCTCGTCAAGTGCAATATGCAGATCGACCCAGCAAAGTACAAGAATATCTCGTCTGGTTTTGGAATTCTGCTAAAGGAGCAGGGAGTGCGAGGGTTCTTCCGGGGTTGGGTGCCGACCTTGCTTGGTTACAGTGCTCAGGGTGCCTGCAAGTTCGGATTTTACGAGTTCTTCAAGAAATACTATTCTGACATGGTTGGACCAGAGAATGCAGTAAAGTACAAAACTTTGATATACCTTGCTGGTTCAGCATCGGCAGAAGTAATTGCCGATGTCGCTCTTTGCCCCATGGAGGCCGTCAAAGTTCGCGTCCAAACTCAACCTGGTTTTGCTCGGGGTTTGTCTGATGGTCTCCCAAAGTTTGTCAAGTCTGAGGGTGCTCTTGGGCTCTACAAAGGTCTGGTTCCTCTTTGGGGACGTCAGATTCCATATACCATGATGAAATTTGCCTCTTTCGAAACAATTGTTGAGAAGCTGTACAAGTATGCCATCCCAAGGCCTAAAGAGCAGTGTAGCAAATCTCTGCAGCTTGGAGTGAGCTTTGCTGGGGGGTATGTGGCCGGGGTTCTCTGTGCTGTGGTCTCACACCCGGCTGATAATCTTGTTTCTTTTCTCAACAATGCCAAGGGAGCAACCGCCGGAGATGCTGTCAGGCAGCTAGGTTTATGGGGTCTTTTTACTCGTGGCCTTCCCCTTCGGATTGTTATGATTGGAACTCTTACCGGATCTCAATGGGGAATATATGACGCATTCAAAGTTTTCGTTGGACTGTACGTCTTTTTGGCTTGGTCTTTCGTGCATTCCTTTCTCAGCCAACAACTGGTGGCGCCGCCCCTGCTACGGCTGCCAAAAAGTGAAGGCGTGAGCCGTTTTGTGTCCCCTAATTGCCAACAAAAGCAGATGGTTCTAGTACCAAGACTTGGCAATGATTCTGATTCTGCTGAGGACCATAAAATTGGGTTTTTTGAAGCTAAAGAAGCACTTTTTTGTAGGACATACTATTACCAATTGCATCATTCCCTTTCTTTTTTTTTTTTTTTTTTCCTCTGTATTTGA 1272 47.01 MAISKDAQQSLIPSFVYSSAKWGTSTSSYDKSFPIIEAPKEKIKMYSPAFYAACTVGGILSCGLTHMTVTPLDLVKCNMQIDPAKYKNISSGFGILLKEQGVRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDMVGPENAVKYKTLIYLAGSASAEVIADVALCPMEAVKVRVQTQPGFARGLSDGLPKFVKSEGALGLYKGLVPLWGRQIPYTMMKFASFETIVEKLYKYAIPRPKEQCSKSLQLGVSFAGGYVAGVLCAVVSHPADNLVSFLNNAKGATAGDAVRQLGLWGLFTRGLPLRIVMIGTLTGSQWGIYDAFKVFVGLYVFLAWSFVHSFLSQQLVAPPLLRLPKSEGVSRFVSPNCQQKQMVLVPRLGNDSDSAEDHKIGFFEAKEALFCRTYYYQLHHSLSFFFFFFLCI 423
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 185661 187986 + Maker00007449 Lcy2g0022 624787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0022 423 Pfam Mitochondrial carrier protein 51 136 IPR018108 -
Lcy2g0022 423 Pfam Mitochondrial carrier protein 147 233 IPR018108 -
Lcy2g0022 423 FunFam Phosphate carrier protein, mitochondrial 49 327 - -
Lcy2g0022 423 SUPERFAMILY Mitochondrial carrier 52 322 IPR023395 -
Lcy2g0022 423 ProSiteProfiles Solute carrier (Solcar) repeat profile. 146 230 IPR018108 -
Lcy2g0022 423 Gene3D Mitochondrial carrier domain 49 327 IPR023395 -
Lcy2g0022 423 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 35 329 IPR044677 GO:0005315(InterPro)|GO:0005315(PANTHER)|GO:0031305(PANTHER)|GO:0035435(PANTHER)|GO:1990547(InterPro)
Lcy2g0022 423 ProSiteProfiles Solute carrier (Solcar) repeat profile. 49 133 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g1034 Lcy-Chr10:32454129 Lcy2g0022 Lcy-Chr2:185661 1.41E-187 dispersed
Lcy2g0022 Lcy-Chr2:185661 Lcy4g0439 Lcy-Chr4:5344438 2.18E-98 dispersed
Lcy10g0054 Lcy-Chr10:784161 Lcy2g0022 Lcy-Chr2:185661 1.83E-183 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0022 K15102 - csv:101220423 594.734