Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0063 ATGGCCGCCACGAATACGAATGTCGCCAGCGGCGTCGACGACCGCGTCCTGGCCACTGCTCAGCAGATCGTCAAGAGCCTCAATACCCCTAAGGAGGTTCGTGAGGACATGCTCTTGATTCTCTCCAGTTTTGATAATCGCCTTTCCAGTATCGGTAGTATGATCGGCAGTGACGACTCCAAGACCAAGAATGATACGTTGGACGCCGCGGAGAAGGTGATTCTTCGTTGGGACCCTAATTCCGATGTGTCCAGACGGTCGCTTAATTGGGAGGACTCGCCGGACGAGGCGGCTGAGTATTTGTCGGCGGTGGATGATATTCTCCGGCTACTGGAAGACCTTTCCATTGGGTCCGACTCGACTGAGATCGTAGACCGGGCCGAAAACGCGATCCAAATGGCGATGTGTCGGCTCGAGAGTGAATTCCGCCATATCCTGATCCAGAGCACAGTCCCTCTCGACGCCGAGCGGCTCTACGGCTCGATCCGAAGAGTTCACCTCTCGTTTGCGTCCAATTACAGTGAAATTGACGATGAATTCGAGAGTTTCGGCGAGGAAAGTCGCAGTTCCGGGCGATTCCATGAGCGAGGTGCGACAATTGGAGAAGATTCTTGGGTCGATTTGATCCATCCCGATGCGGCTGTTGATCTGTCGGAGATTGCGGACCGTATGATTCGTGCCGGCTACGAAAAGGAGTGTGTTCAAGTCTATAGCACCGTTCGTCGTGATGCTTTGGACGAGTGCTTGGCGATTCTTGGCGTCGAACGGCTTAGCATTGAGGAGGTTCAGAAAAGTGACTGGAAATTTTTGGATGAGAAGATGAAGAAATGGATTCAGGCCGTCAAAATTACAGTCCGGTTGATTTTGGACGGTGAGAAGAGGCTATGTGATCAGATTTTCAATGGCGCCAATGAGTCCAAGGAGATTTGCTTTAACGAAACGGCAAAGGGGTGTGTAATGCAGCTCTTGAATTTTGGTGAGGCAGTGGCTATTGGCAAGAGGTCACCGGAGAAGCTGTTCCGTATCTTGGACATGTACGATGCTTTGGCCGGCGTTTTGCCTGACTTGGAAGCCATGGTTTCCGATGAGTTTCTGATCAGTGAAGCGCATGGAGTGTTGTCTGGACTGGGAGAAGCCGCCACGGGGACATTTGCAGAGTTTGAGAATGCTATTGAAAGCGAAAATTCGAAGAAAGCAATGCAAAATGCAGAGATTCACCCACTTATTCGATATGTAATGAATTATGTGAGATTGCTGGTTGATTACAGTAAGACGATGAACTCTCTTTTAGAAGATGAGGAAGTACAAGACTTGCGGAATGTGAACGATAATGACGATGATCTGCAGTTGAAAAGCACGTCGCCTTTAGCTCGTAGATTGTTAATGCTGTTATCATCTTTGGAATCCAATCTTGTGGATAAATCAAAACTTTATGAGGATATTGCTATGCAGTTCATATTTCTAATGAACAATATACTGTATATAGTGAAAAAGGTGAAAGATTCTGAGCTTGCTCAGCTGCTTGGCGATAACTGGCTTCGCAGGCATAGCGGCCAAATTCGCCAATATGAAACAAGTTACCTTAGAGCCTCTTGGAGCAAAGTTTTGTCTTGCTTAAAGGATGAAGGTATTGGTGGGAGCACTAGCAATGCCTCCAAGGTAGCTTTGAAGGAAAAGTTCAAGAATTTCAATGCAGGTTTTGAAGAAATCTGCAGGGTTCAGACATCTTGGAAGGTATCGGATGCTCAACTGCGCGATGAGCTGATAATATCTGTTTCGGAGAAGGTGATTCCAGCGTATCGCTCCTTCTTGGGAAGGTTTAGAAATCAGTTAGAGAGCGGAAGGCATTCTGGGAAGTACATAAAGTACACACCAGAGGACTTAGAGAACTCTCTATCAGATTTGTTTGAAGGATCGCCTGCTGTTTCACATCACATGCGAAGAAAGGGTACTTGA 1956 47.49 MAATNTNVASGVDDRVLATAQQIVKSLNTPKEVREDMLLILSSFDNRLSSIGSMIGSDDSKTKNDTLDAAEKVILRWDPNSDVSRRSLNWEDSPDEAAEYLSAVDDILRLLEDLSIGSDSTEIVDRAENAIQMAMCRLESEFRHILIQSTVPLDAERLYGSIRRVHLSFASNYSEIDDEFESFGEESRSSGRFHERGATIGEDSWVDLIHPDAAVDLSEIADRMIRAGYEKECVQVYSTVRRDALDECLAILGVERLSIEEVQKSDWKFLDEKMKKWIQAVKITVRLILDGEKRLCDQIFNGANESKEICFNETAKGCVMQLLNFGEAVAIGKRSPEKLFRILDMYDALAGVLPDLEAMVSDEFLISEAHGVLSGLGEAATGTFAEFENAIESENSKKAMQNAEIHPLIRYVMNYVRLLVDYSKTMNSLLEDEEVQDLRNVNDNDDDLQLKSTSPLARRLLMLLSSLESNLVDKSKLYEDIAMQFIFLMNNILYIVKKVKDSELAQLLGDNWLRRHSGQIRQYETSYLRASWSKVLSCLKDEGIGGSTSNASKVALKEKFKNFNAGFEEICRVQTSWKVSDAQLRDELIISVSEKVIPAYRSFLGRFRNQLESGRHSGKYIKYTPEDLENSLSDLFEGSPAVSHHMRRKGT 651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 462483 464438 + Maker00007672 Lcy2g0063 624828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0063 651 FunFam Exocyst subunit Exo70 family protein 83 644 - -
Lcy2g0063 651 Pfam Exocyst complex component Exo70 N-terminal 66 148 - -
Lcy2g0063 651 SUPERFAMILY Cullin repeat-like 65 637 IPR016159 -
Lcy2g0063 651 Gene3D Exocyst complex component Exo70 73 645 - -
Lcy2g0063 651 PANTHER EXOCYST COMPLEX PROTEIN EXO70 43 639 IPR004140 GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Lcy2g0063 651 Pfam Exo70 exocyst complex subunit C-terminal 275 634 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g0063 Lcy-Chr2:462483 Lcy8g1841 Lcy-Chr8:44721348 1.74E-102 dispersed
Lcy10g1115 Lcy-Chr10:33504180 Lcy2g0063 Lcy-Chr2:462483 2.03E-104 transposed
Lcy11g0045 Lcy-Chr11:447898 Lcy2g0063 Lcy-Chr2:462483 6.48E-122 transposed
Lcy11g1075 Lcy-Chr11:32426632 Lcy2g0063 Lcy-Chr2:462483 3.37E-110 transposed
Lcy13g0060 Lcy-Chr13:674209 Lcy2g0063 Lcy-Chr2:462483 2.50E-147 transposed
Lcy13g2139 Lcy-Chr13:40284631 Lcy2g0063 Lcy-Chr2:462483 1.01E-27 transposed
Lcy1g1210 Lcy-Chr1:11440877 Lcy2g0063 Lcy-Chr2:462483 6.46E-92 transposed
Lcy5g2492 Lcy-Chr5:47732169 Lcy2g0063 Lcy-Chr2:462483 1.69E-123 transposed
Lcy7g0563 Lcy-Chr7:4949704 Lcy2g0063 Lcy-Chr2:462483 4.71E-93 transposed
Lcy2g0063 Lcy-Chr2:462483 Lcy5g2120 Lcy-Chr5:44244463 1.75E-300 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0063 K07195 - csv:101205970 1115.91