Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0066 ATGCAACTCAACTTCCCCATCTCCTTCTTCTTCTTCCTTCTCTCTCTCTCTCTATGGGCTTTCTTTTTCCTCTATCTCTGTATCTTTAAATTCTACTGCTTTTCTGCGAAGCGCTTTTCCCCTCCTTCCTACCCTCTCATCGGCTGCCTCTTTTCTTTCTACAAAAACCGCCGCCGCCTTCTCACCTGGTACACCGACCTGCTTTCCGACTCCCCGACGCGGACCATCGTCGTGCACCGGCTCGGTTCGAGGCGGACCGTCGTCACGGCCAACCCGGCCAATGTCGAGTACATGCTCAAGACTAATTTTGTGAATTACCCTAAGGGGAAGCCGTTCACTGATATACTCGGCGATCTCCTCGGCTGTGGCATTTTCAACGTCGACGGCGAGTTGTGGTCCACGCAACGCAAGCTGGCGAGTCACGAATTTTCTGCCAAGTCTTTGAGGGAATTCGTCGTCAAGACGCTTGAAGATGAAGTCCATCTCCGTTTGCTTCCCTTGCTTCACAACGCCGTCCGGACTAACGCCGTCTTGGATTTGCAAGACGTTTTGGGAAGGCTCGCTTTTGACACCGTCTGTAAGGTGACGCTGGGAACGGACGAGCAATGTTTGGACATGTCGCGGCCAGTTCCAGCAATAGTAAATGCATTCGACAGGGCCACAGGGATCAGCGCCAAGCGGGCAATAGCGCCGCTGTTTCTCGCGTGGAAAGCCAAGCGCCTGTTCAACGTCGGCTCCGAAAAGCAGCTCAAAGAAGCAGTGGAAATGGTCCACGCATGGGTCTCCAACATCATTCGCAACAAAAACCTTGATAACAGCGATATTGATTTGTTGTCTCGCCTCTTGTTGGCCGGCCACGGCGAAGAGGTCGTCCGAGACATGGTTGTCAGCTTCATAATGGCTGGCCGCGACACCACCTCCGCCGCCATGACGTGGCTCTTCTGGTTGCTCACGAAACACCCCAAGGCCGAAGAGGCCCTGATCAACGAAGTCACTTCCTTGTCCGAAACGGCGTCGTCGGGCTACGCCTACGATGACTTGAAGGACATGAAGTATTTGAAGGCGTGTTTGTGCGAGTCCATGCGGCTTTACCCGCCGGTGGCTTGGGATTCGAAGCACGCGGCGGCGCCGGACGTTCTTCCGGACGGAACTCCGGTGAGGAAAGGCGACAGAGTCACGTATTTCCCGTACGGAATGGGCCGGATGGAGGAGCTATGGGGGAAGGACCGGCTCGAGTTCAAACCGGACCGGTGGCTCCAGAACGGGGAGTTGAAACCGGTCAGCCCGTTCAAGTTCCCGGTGTTTCAAGCCGGTCCGAGGATGTGCTTGGGAAAGGAAATGGCGTTCATTCAGATGAAATACGTGGTGGCCACGGTTTTGAAGCGGTTTGAATTTAGACCGGCGAGTGAAAATCAGCCGGTTTTTGTCCCGTTGTTGACAGCTCATATGGCTGGTGGATTACAGGTTTATGTTAGAGAAAGGACAGGACAAAAGTCAACCATTTGGTGA 1509 54.14 MQLNFPISFFFFLLSLSLWAFFFLYLCIFKFYCFSAKRFSPPSYPLIGCLFSFYKNRRRLLTWYTDLLSDSPTRTIVVHRLGSRRTVVTANPANVEYMLKTNFVNYPKGKPFTDILGDLLGCGIFNVDGELWSTQRKLASHEFSAKSLREFVVKTLEDEVHLRLLPLLHNAVRTNAVLDLQDVLGRLAFDTVCKVTLGTDEQCLDMSRPVPAIVNAFDRATGISAKRAIAPLFLAWKAKRLFNVGSEKQLKEAVEMVHAWVSNIIRNKNLDNSDIDLLSRLLLAGHGEEVVRDMVVSFIMAGRDTTSAAMTWLFWLLTKHPKAEEALINEVTSLSETASSGYAYDDLKDMKYLKACLCESMRLYPPVAWDSKHAAAPDVLPDGTPVRKGDRVTYFPYGMGRMEELWGKDRLEFKPDRWLQNGELKPVSPFKFPVFQAGPRMCLGKEMAFIQMKYVVATVLKRFEFRPASENQPVFVPLLTAHMAGGLQVYVRERTGQKSTIW 502
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 478628 480370 + Maker00007530 Lcy2g0066 624831
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0066 502 CDD CYP86A 74 487 - -
Lcy2g0066 502 SUPERFAMILY Cytochrome P450 41 494 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0066 502 Gene3D Cytochrome P450 39 501 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0066 502 Pfam Cytochrome P450 41 473 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0066 502 PANTHER CYTOCHROME P450 25 487 - -
Lcy2g0066 502 PRINTS E-class P450 group IV signature 292 318 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0066 502 PRINTS E-class P450 group IV signature 350 366 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0066 502 PRINTS E-class P450 group IV signature 384 398 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0066 502 PRINTS E-class P450 group IV signature 401 419 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0066 502 PRINTS E-class P450 group IV signature 442 460 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0066 502 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0066 502 PRINTS P450 superfamily signature 442 453 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0066 502 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0066 502 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0066 502 FunFam Cytochrome P450 33 497 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g0066 Lcy-Chr2:478628 Lcy5g0812 Lcy-Chr5:12554633 6.08E-139 dispersed
Lcy12g2143 Lcy-Chr12:42723585 Lcy2g0066 Lcy-Chr2:478628 4.68E-88 transposed
Lcy10g0101 Lcy-Chr10:1316657 Lcy2g0066 Lcy-Chr2:478628 9.66E-207 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0066 K20665 - csv:101202989 823.157