Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0083 ATGAACCAAGACAACTATCTTGAAGAGGCAATCAAAATGAGAAATCTTCTGGAGGAATTTCATGAAAAGCATGGGCTTCGGCCTCCTACCATCCTAGGTGTGAGAGAGCATGTATTCACTGGAAGTGTCTCTTCATTAGCATGGTTCATGTCGAATCAGGAAACAAGCTTTGTAACCTTGGGACAACGTGTTTTGGCAAGTCCACTCAAAGTCCGAATGCATTATGGCCATCCTGATGTGTTTGATCGTATATTTCATATTACTCGAGGTGGCATTAGCAAGGCATCACGTGTGATCAACATTAGTGAGGATATATATGCAGGTTTCAACTCCACTTTGAGGCAGGGTAACATTACGCACCATGAGTATATTCAGGTTGGAAAAGGAAGGGATGTTGGGTTAAACCAAATTGCCCTGTTTGAAGGGAAAGTAGCAGGTGGGAATGGAGAGCAGGTTCTTAGCAGGGATGTTTACAGGCTTGGGCAACTTTTTGATTTCTTCAGAATGCTCTCGTTTTATTTCACAACTGTTGGTTACTATGCATGCACCATGATGACAGTTCTTGTGGTTTATATATTCTTATATGGACGGGTTTACCTGGCCTTTGCCGGACTTGACGAAGCAATCTCAAAAAGGGCAAAAATGTTGGGAAACACAGCACTGAATACTGCACTGAATGCTCAGTTTTTGTTTCAGATTGGAGTTTTTACTGCAGTCCCTATGATAATGGGTTTTATACTTGAACTTGGACTACTGAAGGCTGTTTTTAGCTTCATAACTATGCAGCTTCAGTTATGTTCTGTCTTCTTCACATTCTCTTTGGGGACTAGAACTCATTATTTTGGAAGAACCATTCTCCATGGTGGTGCCAAGGCATGTCTTTATCGCGCAACTGGTAGAGGTTTCGTGGTCCAGCACATCAAATTTGCTGAAAATTATCGGCTCTACTCAAGAAGTCATTTCATCAAAGCGCTTGAGGTGGCATTGCTTCTTACTGTCTACATTGCGTACGGGTATTCAGAAGGAGGTGCAAGTTCTTTTGTTTTGCTTACTCTCAGCAGTTGGTTCCTCGTCATCTCGTGGCTCTTTGCTCCTTATATCTTCAATCCATCTGGTTTTGAGTGGCAAAAGACTGTGGAGGATTTTGACGATTGGACTAGCTGGCTATTCTACAAAGGGGGAGTAGGGGTTAAGGGAGAAAACAGCTGGGAGTCATGGTGGGATGAAGAACAGTTATATGGTTTCTCGTGGGTGGTGCTCGTTGGGATTGTTTTGATATTTAAGATCTTCACCTTCAGTCCTAAAAAATCGACAAATTTCCAGCTATTGATGAGATTTATTCAGGGTGTCACAGCCATAGTTCTGGTTACAGCCCTTGGTCTGATTGTTGGCTTTACTAACCTGTCGATAGCCGACTTATTTGCAAGTGTTTTGGCATTTATTCCTACTGGATGGGCCATGTTATGTTTTGCAGTTACTTGGAAGAGAGTAGTGAGATATCTAGGCTTGTGGGACTCAGTTCGTGAATTTGCCAGGATGTATGATGCTGGGATGGGTTTAATAATATTCGTGCCCATCGCATTCTTATCCTGGTTTCCATTCATTTCCACGTTCCAATCTCGTCTGCTCTTCAACCAAGCTTTCAGCCGTGGGCTCGAGATCTCGCTCATCCTTGCTGGAAACAAAGCTAACGTCGAGACGTACTGA 1707 43.0 MNQDNYLEEAIKMRNLLEEFHEKHGLRPPTILGVREHVFTGSVSSLAWFMSNQETSFVTLGQRVLASPLKVRMHYGHPDVFDRIFHITRGGISKASRVINISEDIYAGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVAGGNGEQVLSRDVYRLGQLFDFFRMLSFYFTTVGYYACTMMTVLVVYIFLYGRVYLAFAGLDEAISKRAKMLGNTALNTALNAQFLFQIGVFTAVPMIMGFILELGLLKAVFSFITMQLQLCSVFFTFSLGTRTHYFGRTILHGGAKACLYRATGRGFVVQHIKFAENYRLYSRSHFIKALEVALLLTVYIAYGYSEGGASSFVLLTLSSWFLVISWLFAPYIFNPSGFEWQKTVEDFDDWTSWLFYKGGVGVKGENSWESWWDEEQLYGFSWVVLVGIVLIFKIFTFSPKKSTNFQLLMRFIQGVTAIVLVTALGLIVGFTNLSIADLFASVLAFIPTGWAMLCFAVTWKRVVRYLGLWDSVREFARMYDAGMGLIIFVPIAFLSWFPFISTFQSRLLFNQAFSRGLEISLILAGNKANVETY 568
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 645247 658369 - Maker00007518 Lcy2g0083 624848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0083 568 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 411 - GO:0005886(PANTHER)|GO:0046527(PANTHER)
Lcy2g0083 568 Pfam 1,3-beta-glucan synthase component 1 410 IPR003440 GO:0000148(InterPro)|GO:0003843(InterPro)|GO:0006075(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g0083 Lcy-Chr2:645247 Lcy2g1134 Lcy-Chr2:11315198 1.83e-313 dispersed
Lcy2g0083 Lcy-Chr2:645247 Lcy9g1429 Lcy-Chr9:39266574 2.44E-204 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0083 K11000 - csv:101217890 1087.4