Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0084 ATGACGACCCGCTTCAAGAAAAGGAAGAAGCGGGGTCACGTGAGCCTCGGCCATGGTTGTATCAGCAAGCATTGTAAGCACCCTGGTGATCGTGGGACTGTCGGAGGTATGTACCACCACAGAATCCCCTTCGACAAATACCATCCTGGTTATTTCAGAAAGGTTGGAATGAGTTTGGGTATTTCAAAATTTTGGGCAAAGGTGTTTTGCCGAGAACCAGCCTGTCGTTGTGAAAGCCAAGCTCATCTCCAAAATTGCCGAGAAGAAGATCAAAGAGAATGGTGGTGTGGTTGTTCTTACGGCTTAGGTTTATTGGATGAATGGGAAAACTTTTTGGAACGGATTGGTCGAAGTCATGCCACGGGGGAAGCTGAGCTCCAAAAAAGTCCAAGTGATGCCTTGGAGCTTCGATTTTGGGTTTCATATCGAGGGCAAACTCTAGCTCGGACAGTTCGCGGTATGATGTACTACAGGAGAGCTTTAATGCTTCAGAGCTATCTGGAGAAGAGATCATTTGGGGACAATTATTCTCAAATCAACTTTCCCACGAATCAAGGGTTTGAGTTATCTCTAGAATCAAGGGCACAAGCAGACTTGAAGTTTACCTATGTTGTTTCCTGTCAAATATATGGGCAACAAAAGCAGAGAAAAGCTCCAGAGGCTACTGATATTGCTCTTTTGCTGCAGAGTGTTGAGGCTTCTATAGGCTATCGACCACAAAAACACTTTCACCTTTTTGGGGCTTTTATGCTTCCAGATCCTACTAATGATGGAGGGGTTGATTCTAGTTGGAGATTTAACAAGCTTTTGGAACATAGACTTTGTGGAATAAGAGCCAGAAGAATCGGGCAGCCCAGTGTTTTAAAAGGCGCGCGCCCGGGCGCGCCTAGGCGCAAGGCGCAACCTTAG 909 46.09 MTTRFKKRKKRGHVSLGHGCISKHCKHPGDRGTVGGMYHHRIPFDKYHPGYFRKVGMSLGISKFWAKVFCREPACRCESQAHLQNCREEDQREWWCGCSYGLGLLDEWENFLERIGRSHATGEAELQKSPSDALELRFWVSYRGQTLARTVRGMMYYRRALMLQSYLEKRSFGDNYSQINFPTNQGFELSLESRAQADLKFTYVVSCQIYGQQKQRKAPEATDIALLLQSVEASIGYRPQKHFHLFGAFMLPDPTNDGGVDSSWRFNKLLEHRLCGIRARRIGQPSVLKGARPGAPRRKAQP 302
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 659736 662779 - Maker00007569 Lcy2g0084 624849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0084 302 SUPERFAMILY Ribosomal proteins L15p and L18e 6 61 IPR036227 -
Lcy2g0084 302 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 106 230 - GO:0005886(PANTHER)|GO:0046527(PANTHER)
Lcy2g0084 302 Pfam 1,3-beta-glucan synthase component 128 229 IPR003440 GO:0000148(InterPro)|GO:0003843(InterPro)|GO:0006075(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g0084 Lcy-Chr2:659736 Lcy2g1134 Lcy-Chr2:11315198 5.87E-44 dispersed
Lcy2g0084 Lcy-Chr2:659736 Lcy9g1429 Lcy-Chr9:39266574 2.03E-20 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0084 K11000 - csv:101217890 241.506