Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0086 ATGGAATTCTTTATTAACTGCTTATGTCTTCAAACCTTAAACTTATGCATCCAAGAGAGACTTGAGAAAATAGATGAGAAAGCAGTCAACGAGGTTTTCTTGAAGGTTCTTGATAACTACATCAAATGGTGTAAATACTTGCGTATTCGCCTTGCATGGAATAGCTTCGAGGCAATTAATAGGGACAGGAAGCTTTTCCTTGTTTCACTGTACTTGCTTATATGGGGTGAAGCTGCAAATGTCCGCTTCCTTCCTGAATGCATTTGCTATTTGTTCCACCATATGGCAAAAGAATTGGATGCTAAACTTGATCATGGAGAAGCGGTTCCTTCCGATAACTGTAAGCTGGAAGATGGTTCCATGTCTTTCCTCCAACGAATCATTTGTCCTATATACAAGACACTTGTAGCTGAAACTGAAAGAAATAAAAATGGGAAAGCCGCACATTCAGCCTGGAGGAACTATGACGATTTCAATGAATACTTTTGGTCACCTACTTGCTTCGAATTAGGCTGGCCAATGAGGGAGGAATCAAGTTTTTTACAGAAGCCTAGAGGCTCAAAACGGGTTAGAAAGTTTGTCTTTTATAACTTCTTCTAA 600 39.33 MEFFINCLCLQTLNLCIQERLEKIDEKAVNEVFLKVLDNYIKWCKYLRIRLAWNSFEAINRDRKLFLVSLYLLIWGEAANVRFLPECICYLFHHMAKELDAKLDHGEAVPSDNCKLEDGSMSFLQRIICPIYKTLVAETERNKNGKAAHSAWRNYDDFNEYFWSPTCFELGWPMREESSFLQKPRGSKRVRKFVFYNFF 199
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 683121 686362 - Maker00007660 Lcy2g0086 624851
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0086 199 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 64 172 IPR026899 -
Lcy2g0086 199 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 19 185 - GO:0005886(PANTHER)|GO:0046527(PANTHER)
Lcy2g0086 199 SMART FKS1_dom1_2 62 175 IPR026899 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g0086 Lcy-Chr2:683121 Lcy2g1151 Lcy-Chr2:11496659 4.22E-50 dispersed
Lcy2g0086 Lcy-Chr2:683121 Lcy9g1429 Lcy-Chr9:39266574 2.09E-49 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0086 K11000 - csv:101217890 334.339