Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy2g0086 | ATGGAATTCTTTATTAACTGCTTATGTCTTCAAACCTTAAACTTATGCATCCAAGAGAGACTTGAGAAAATAGATGAGAAAGCAGTCAACGAGGTTTTCTTGAAGGTTCTTGATAACTACATCAAATGGTGTAAATACTTGCGTATTCGCCTTGCATGGAATAGCTTCGAGGCAATTAATAGGGACAGGAAGCTTTTCCTTGTTTCACTGTACTTGCTTATATGGGGTGAAGCTGCAAATGTCCGCTTCCTTCCTGAATGCATTTGCTATTTGTTCCACCATATGGCAAAAGAATTGGATGCTAAACTTGATCATGGAGAAGCGGTTCCTTCCGATAACTGTAAGCTGGAAGATGGTTCCATGTCTTTCCTCCAACGAATCATTTGTCCTATATACAAGACACTTGTAGCTGAAACTGAAAGAAATAAAAATGGGAAAGCCGCACATTCAGCCTGGAGGAACTATGACGATTTCAATGAATACTTTTGGTCACCTACTTGCTTCGAATTAGGCTGGCCAATGAGGGAGGAATCAAGTTTTTTACAGAAGCCTAGAGGCTCAAAACGGGTTAGAAAGTTTGTCTTTTATAACTTCTTCTAA | 600 | 39.33 | MEFFINCLCLQTLNLCIQERLEKIDEKAVNEVFLKVLDNYIKWCKYLRIRLAWNSFEAINRDRKLFLVSLYLLIWGEAANVRFLPECICYLFHHMAKELDAKLDHGEAVPSDNCKLEDGSMSFLQRIICPIYKTLVAETERNKNGKAAHSAWRNYDDFNEYFWSPTCFELGWPMREESSFLQKPRGSKRVRKFVFYNFF | 199 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 683121 | 686362 | - | Maker00007660 | Lcy2g0086 | 624851 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy2g0086 | 199 | Pfam | 1,3-beta-glucan synthase subunit FKS1, domain-1 | 64 | 172 | IPR026899 | - | |
| Lcy2g0086 | 199 | PANTHER | LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 | 19 | 185 | - | GO:0005886(PANTHER)|GO:0046527(PANTHER) | |
| Lcy2g0086 | 199 | SMART | FKS1_dom1_2 | 62 | 175 | IPR026899 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy2g0086 | Lcy-Chr2:683121 | Lcy2g1151 | Lcy-Chr2:11496659 | 4.22E-50 | dispersed | |
| Lcy2g0086 | Lcy-Chr2:683121 | Lcy9g1429 | Lcy-Chr9:39266574 | 2.09E-49 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lcy2g0086 | K11000 | - | csv:101217890 | 334.339 |