Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0103 ATGGCTTCGCCTTCCTCCAAACTCCTTCCCTTCTTGGCCTTTCTCTCCATCCTTTTCCAAGTCCATGCCCGGCTGAGCCTTGATCCTTCAGATCTCAGAGCCTTTTCCATCATCAAGAATGACTTGGGCATTGGCGGTCAACTCTCCTCCTCCCCATGCGACCTCGCCGGTGTCTTCTGCGAGCGGCGCCTCTCCGACAACGGCACTTATGTTTTGAGGATCACCAGGCTCATTTTCAAGTCCAAAGGACTTGCCGGTTCTCTTTCTCCAGCCATTGGGCGGCTCACGGAGTTGAAAGAGCTTACGTTTTCTAATAATCACCTCGTTGACCAAGTACCAGCTCAAATTGTTGACTGCCGGAAACTGGAAATTCTCGATCTCCAAAACAACCAGTTTTCTGGCAAAGTTCCATCTGGATTGTCCTCGTTGATTCGCCTTCGAGTCATCGATCTTTCGTCCAATAAGTTCTCGGGGAGTTTGGATTTCTTGAAGCATTTCCCCAACTTGGAGAGTCTCTCCATAGCCAACAACTACTTCACGGGGAAGATCCCAGCTTCAATTCGTTCTTTTCGCAATCTTCGAGTCTTCAACTTCTCCGGAAATCGCCTTCTCGAAAGCTCAGCCCCCATCGTGAAAGGCGTCGAGCTCTACTCGGCAAACGAAGTTCCCAAGCGTTATAAGTTAGCTGAGAATTCAACTACGAAAGGCAAGCACAGTGCCGCCGCCACAGCGCCAACTTCGAGTGCTCAGGCTCCATCTCCCGCAACATCCCTTACTCATAGGCATCGGAAAAATAAAGTAAAGAAGGTAATTGCTTGGATACTTGGATTCCTCGCAGGAGCAATTGCTGGAAGTTTGTCAGGGTTTATCTTTTCTCTACTGTTTAAAATCGTCATAGCAGTTATAAAAGGTGGAAGCAAGAATTCGGGCCCATCAATCTTTGCTCCCAAGTTAATAAAACGAGAGGATTTGGCTTTTCTAGAGAGAGACGATGCGCTTGCATCACTCGAGCTGATTGGAAAAGGTGGATGTGGAGAAGTTTACAAGGCCGAATTACCAGAAAAAAGCGGGAAAATGTTTGCAATAAAGAAGGTAACTCAACCCCCAAAGGACGCGGCCGAGTTAGCTGACGAGGATAGCAGGTCTATGAACAAGAAAATGCGTCAGATCAAGTCAGAGATCAGAACTGTGGGTGAAATCCGGCATCGGAATCTTCTTCCTCTTGTGGCCCATGTCCTCCGTCCTGACTGCCACTACCTTGTGTATGAATTAATGAAGAATGGCAGCTTGCAAGATATGTTGAATCAGGTTTCAGCAGGAGTGAAAGAACTAGATTGGCTTACTCGGCATAAGATTGCTATCGGAGTGGCATCTGGGCTGGAGTATCTTCACATGAACCATACCCCACGTATTATTCACAGGGATCTGAAGCCTGCAAATGTTTTGCTTGATGACAACATGGAAGCTCGAATTGCTGATTTTGGGCTGGCAAAAGCAATGCCAGACGCCCAAACTCACATGACAGCTTCAAATGTTGCAGGTACTGTAGGATACATCGCACCAGAGTATCATCAAACCTTGAAGTTCACTGATAAGTGCGATATATACGGCTTTGGGGTTCTGCTAGGTGTCTTGGTGATTGGGAAACTTCCATCTGATGAGTTTTTCCAGGACACGGATGAGATGAGTTTGGTTAAGTGGATGAAGAATGTTATGACTTCGGATAATCCTAGGAGAGCCATTGATCCGAAGCTCCAGGGAAATGGCTGGGAGGAGCAAATGCTCTTGGCCCTCAAAATTGCCTGCTTTTGCACTATGGAGAATCCAAAAGAGAGGCCTAACAGTAAGGATGTCAGATGCATGCTGTCACAGATCAAGCACGATGTACCTGAAATTCCCCCTCACTCTCAGAATGTCTAA 1920 47.08 MASPSSKLLPFLAFLSILFQVHARLSLDPSDLRAFSIIKNDLGIGGQLSSSPCDLAGVFCERRLSDNGTYVLRITRLIFKSKGLAGSLSPAIGRLTELKELTFSNNHLVDQVPAQIVDCRKLEILDLQNNQFSGKVPSGLSSLIRLRVIDLSSNKFSGSLDFLKHFPNLESLSIANNYFTGKIPASIRSFRNLRVFNFSGNRLLESSAPIVKGVELYSANEVPKRYKLAENSTTKGKHSAAATAPTSSAQAPSPATSLTHRHRKNKVKKVIAWILGFLAGAIAGSLSGFIFSLLFKIVIAVIKGGSKNSGPSIFAPKLIKREDLAFLERDDALASLELIGKGGCGEVYKAELPEKSGKMFAIKKVTQPPKDAAELADEDSRSMNKKMRQIKSEIRTVGEIRHRNLLPLVAHVLRPDCHYLVYELMKNGSLQDMLNQVSAGVKELDWLTRHKIAIGVASGLEYLHMNHTPRIIHRDLKPANVLLDDNMEARIADFGLAKAMPDAQTHMTASNVAGTVGYIAPEYHQTLKFTDKCDIYGFGVLLGVLVIGKLPSDEFFQDTDEMSLVKWMKNVMTSDNPRRAIDPKLQGNGWEEQMLLALKIACFCTMENPKERPNSKDVRCMLSQIKHDVPEIPPHSQNV 639
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 803317 805236 - Maker00007630 Lcy2g0103 624868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0103 639 SMART serkin_6 333 626 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy2g0103 639 FunFam Leucine-rich repeat receptor protein kinase EMS1 69 163 - -
Lcy2g0103 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy2g0103 639 Gene3D Transferase(Phosphotransferase) domain 1 425 632 - -
Lcy2g0103 639 MobiDBLite consensus disorder prediction 233 258 - -
Lcy2g0103 639 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 261 627 IPR051564 GO:0016020(PANTHER)
Lcy2g0103 639 SUPERFAMILY L domain-like 48 206 - -
Lcy2g0103 639 SUPERFAMILY Protein kinase-like (PK-like) 332 626 IPR011009 -
Lcy2g0103 639 FunFam Leucine-rich repeat receptor-like protein kinase 425 631 - -
Lcy2g0103 639 Gene3D Ribonuclease Inhibitor 34 161 IPR032675 -
Lcy2g0103 639 MobiDBLite consensus disorder prediction 231 261 - -
Lcy2g0103 639 Pfam Leucine Rich Repeat 168 189 IPR001611 GO:0005515(InterPro)
Lcy2g0103 639 Pfam Leucine rich repeat 97 156 IPR001611 GO:0005515(InterPro)
Lcy2g0103 639 Pfam Protein kinase domain 336 618 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy2g0103 639 Gene3D Ribonuclease Inhibitor 162 218 IPR032675 -
Lcy2g0103 639 Gene3D Phosphorylase Kinase; domain 1 326 424 - -
Lcy2g0103 639 ProSiteProfiles Protein kinase domain profile. 333 630 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g0103 Lcy-Chr2:803317 Lcy10g1602 Lcy-Chr10:40466704 3.44E-56 dispersed
Lcy2g0103 Lcy-Chr2:803317 Lcy9g1649 Lcy-Chr9:41629593 2.28E-58 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65698 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0103 - - - 0.0