Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy2g0111 | ATGGATTCTCATCTTCTTCTCCAGTCGTTATTCCATCCAATTTCCCTCGCTGCTTTCATCGTCTTCTTCATCTTCCTTCTCCAGAAATGGTTGAGCTCTTCACCATCACAAGCCTCACCCCCTTCTCCGCCAAAGCTTCCCATTTTCGGACACCTTTTGAACCTCGGCTCCTATCCCCATCACACTCTCCAAGCCTACGCTCGCCGCTACGGCCCTCTGTTTCTCCTTCACCTCGGCTCCAAGCCCACCATCGTCGTCTCTTCCGCGGAAATGGCTCGCGAAATCATGAAGACCCACGATCTCGTCTTTTCCAACCGACCCAAATCAAGCATGAGCGATAAGCTTCTCTACGACTCCAAAGATATATCCGCAGCTCCTTACGGGGAGTACTGGAGGCAGCTGAAAAGCGTGGCCGTGCTCCATCTTCTGAGCAACAAAAGGGTCCAATCCTTTCGCTCTGTCAGAGAAGAAGAGGTCAAGTTGATGGTTCAGAAGATCCGACAGGACCCAGTTTCGGTGAATTTAAGCGAAGTGTTCTCTAGATTGACGAACGACGTGGTTTGCAGAGTGGCGTTGGGGAGAAAATATGGGGTGGGAGAAGATGGAAAGAAGTTCATGTCTCTTCTGATGCAATTTGGGGAATCTTTGGGGAGTTTCAGCATCAGAGACTTCATTCCATGGCTGGGTTGGATTGATTGTGTCAGTGGATTGGATGCTAAAGCAGAGAGAGTAGCCAAAGAGTTGGATGCTTTGATTGAAAGAGTGATTGAAGATCATGTTCATCCAGAGAAGAAAGAGATGAAGAATAGAGTTGGAAATGAAGAGAAGGACTTGGTGGATGTGCTGCTTTCAATTCAGAGAGAAGACTCCATCGGCTTTTCCCTTGAGATGAAAAGCGTAAAAGCTTTAATCTTGGACATGTTTGCAGCAGGCACAGACACGACATACACAGTATTGGAGTGGGCAATGTCCGAACTTTTGAAACACCCAGAAGTGATGAAGAAACTACAGAATGAGGTTAGAGAAAAAGCAGGTGAGAAAGAATACATAAACGAGGACGACTTGGAAAAGATGCTTTACTTGAAAGCAGTAATGAAAGAAACACTGCGCTTACACCCACCAATCCCACTATTGGTTCCAAGAGAATCAACCCAAGACATCAAACTAAAGAGCTACCAAATTAAAGCTAGAACTCGAGTCATGATCAATGCATGGGCCATCGGAAGAGACCCAGAAGTGTGGGAAGATGCAGAGGAGTTCAGACCAGAAAGATTCTTAAACAATCCGATAGATTTCAAGGGCCACGATTTCATGTTGATCCCATTTGGGGCAGGAAGAAGAGGGTGTCCAGGAGTTTTGTTTGCAATGGCGGTCAGTGAGATGGCTATAGCGAATGTGGCGGGTAAGTTTAAGTGGACGTTGCCCGGTGGAGTTGACAATAAGGATTTAGACATGACGGAAGTGTCCGGGTTAAGCATTCATAGAAAGTTTCCACTCATAGCAATGGCGTCTCCTTGTTAG | 1521 | 46.55 | MDSHLLLQSLFHPISLAAFIVFFIFLLQKWLSSSPSQASPPSPPKLPIFGHLLNLGSYPHHTLQAYARRYGPLFLLHLGSKPTIVVSSAEMAREIMKTHDLVFSNRPKSSMSDKLLYDSKDISAAPYGEYWRQLKSVAVLHLLSNKRVQSFRSVREEEVKLMVQKIRQDPVSVNLSEVFSRLTNDVVCRVALGRKYGVGEDGKKFMSLLMQFGESLGSFSIRDFIPWLGWIDCVSGLDAKAERVAKELDALIERVIEDHVHPEKKEMKNRVGNEEKDLVDVLLSIQREDSIGFSLEMKSVKALILDMFAAGTDTTYTVLEWAMSELLKHPEVMKKLQNEVREKAGEKEYINEDDLEKMLYLKAVMKETLRLHPPIPLLVPRESTQDIKLKSYQIKARTRVMINAWAIGRDPEVWEDAEEFRPERFLNNPIDFKGHDFMLIPFGAGRRGCPGVLFAMAVSEMAIANVAGKFKWTLPGGVDNKDLDMTEVSGLSIHRKFPLIAMASPC | 506 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 850513 | 853044 | - | Maker00007713 | Lcy2g0111 | 624876 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy2g0111 | 506 | Gene3D | Cytochrome P450 | 29 | 500 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0111 | 506 | PANTHER | CYTOCHROME P450 71B11-RELATED | 20 | 503 | IPR050193 | - | |
| Lcy2g0111 | 506 | Coils | Coil | 234 | 254 | - | - | |
| Lcy2g0111 | 506 | SUPERFAMILY | Cytochrome P450 | 40 | 503 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0111 | 506 | Coils | Coil | 333 | 353 | - | - | |
| Lcy2g0111 | 506 | Pfam | Cytochrome P450 | 40 | 493 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0111 | 506 | PRINTS | E-class P450 group I signature | 449 | 472 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0111 | 506 | PRINTS | E-class P450 group I signature | 91 | 112 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0111 | 506 | PRINTS | E-class P450 group I signature | 67 | 86 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0111 | 506 | PRINTS | E-class P450 group I signature | 362 | 380 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0111 | 506 | PRINTS | E-class P450 group I signature | 403 | 427 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0111 | 506 | PRINTS | E-class P450 group I signature | 439 | 449 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0111 | 506 | PRINTS | E-class P450 group I signature | 319 | 345 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0111 | 506 | PRINTS | E-class P450 group I signature | 182 | 200 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0111 | 506 | PRINTS | E-class P450 group I signature | 299 | 316 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0111 | 506 | PRINTS | P450 superfamily signature | 363 | 374 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0111 | 506 | PRINTS | P450 superfamily signature | 310 | 327 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0111 | 506 | PRINTS | P450 superfamily signature | 440 | 449 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0111 | 506 | FunFam | Cytochrome P450 83B1 | 26 | 502 | - | - | |
| Lcy2g0111 | 506 | CDD | CYP71-like | 69 | 499 | - | - | |
| Lcy2g0111 | 506 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 442 | 451 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy2g0111 | Lcy-Chr2:850513 | Lcy5g2175 | Lcy-Chr5:44799016 | 1.09E-153 | dispersed | |
| Lcy7g0137 | Lcy-Chr7:1248511 | Lcy2g0111 | Lcy-Chr2:850513 | 3.86E-84 | dispersed | |
| Lcy2g0111 | Lcy-Chr2:850513 | Lcy2g0113 | Lcy-Chr2:862055 | 7.89E-239 | proximal | |
| Lcy2g0110 | Lcy-Chr2:845263 | Lcy2g0111 | Lcy-Chr2:850513 | 7.44E-145 | tandem | |
| Lcy2g0111 | Lcy-Chr2:850513 | Lcy2g0112 | Lcy-Chr2:855151 | 7.47E-16 | tandem |
Pathway information