Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0113 ATGGACTGTGATCTTCTTCTCCATTTGTTCTTTCATCCAATTTCCCTCACTGCTTTGATCGTCTTCCTCATCTTCCTTCTCCAAAAATGGTTGAGCTCTTCATCCTCAGAAGCCTCGCCCCCTTCTCCGCCAAAGAAGCTTCCCATTTTCGGACACCTTTTGAGCTTCGGCTCCCATCCCCATCATCTCACTTTCCAAGCCTATGCCCGCCGCTACGGCCCTCTGTTTCTGCTTCACCTCGGCTCCAAGCCCACCATCGTCGTCTCTTCAGCAGAATTGGCTCGCGAAATCATGAAGACCCACGATCTCGTCTTTTCCAACCGACCCAAATCAATCAAATCTGATAAGCTTCTTTACGGCTCCAAAGATATAACCGCAGCTCCTTACGGCGAGTACTGGAGGCAGATGAAAAGCCTGGCCGTGCTCCATCTTTTGAGCAACAAAAGAGTTCGATCCTTTCGCTTTGTCAGAGAAGAAGAAGTCAAATTGATGATCGAGAACATCCAACGAAACCCAGCGTCCGTGAATTTGACAGAATTGTTCTCTCAACTGACCAACAACGTCATTTGCAGGGTGGCTTTAGGGAGAAAATATGGGGTGGGAGAAGATGGGAAGAATCTCCACTCTGTTTTGCTGGAGGGGATGAAATTATTGGGGAGTTTTAGTATCAGAAACTTCATTCCATGGCTGGGCTGGATCGATGCTATCACTGGACTGGATGCCAAAATCGAGAGGGTTGCCAAAGAGTTGGATGCTTTCTTAGACAGAGTGATTGAAGATCATGTCAATCCAGAAAATCGTGACGAGCACAAAGACTTGGTGGACATTCTACTCTGTATACAGAGAGAGAAATCCATGGGTTTTCCCCTGAACATGGATAGCATAAAAGCTTTACTCTTGGACATGTTTGTGGCAGGCAAGGACACGACTTACACATTAATGGAGTGGACAATGTCAGAATTGTTGAGACACCCAGATGCCATGAAGAAATTGCAGAGTGAGATCAGAGAAATTACAGGTGACAGAGCATACGTAGACGATGATGATTTGGAAAAGATGCATTACTTGAAAGCAGTAATCAAAGAAACGTTGCGACTACACCCACCAGTCCCACTTCTTTCTCCTAGAGAACCGACTCAATACGTCAAGCTAAAAGGCTACGATATCAAACCGGGCACTCGAGTTACGATCAATGCATGGGCCATCGGAAGAGACCCGAAACTATGGGAAGAAGCAGAGGAGTTTCGGCCGGAAAGGTTTATGAATAGATGGATGGATTTCAAGGGTCATGATTTCGAGCTAGTCCCGTTTGGTGCAGGGAGAAGAGGATGCCCGGGAGTTGTGTTTGCAATGGTAAATGTTGATGTTAAACTGAAACCTCGAGCTTAG 1389 46.36 MDCDLLLHLFFHPISLTALIVFLIFLLQKWLSSSSSEASPPSPPKKLPIFGHLLSFGSHPHHLTFQAYARRYGPLFLLHLGSKPTIVVSSAELAREIMKTHDLVFSNRPKSIKSDKLLYGSKDITAAPYGEYWRQMKSLAVLHLLSNKRVRSFRFVREEEVKLMIENIQRNPASVNLTELFSQLTNNVICRVALGRKYGVGEDGKNLHSVLLEGMKLLGSFSIRNFIPWLGWIDAITGLDAKIERVAKELDAFLDRVIEDHVNPENRDEHKDLVDILLCIQREKSMGFPLNMDSIKALLLDMFVAGKDTTYTLMEWTMSELLRHPDAMKKLQSEIREITGDRAYVDDDDLEKMHYLKAVIKETLRLHPPVPLLSPREPTQYVKLKGYDIKPGTRVTINAWAIGRDPKLWEEAEEFRPERFMNRWMDFKGHDFELVPFGAGRRGCPGVVFAMVNVDVKLKPRA 462
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 862055 863517 - Maker00007590 Lcy2g0113 624878
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0113 462 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0113 462 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0113 462 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0113 462 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0113 462 Pfam Cytochrome P450 41 456 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0113 462 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lcy2g0113 462 SUPERFAMILY Cytochrome P450 40 454 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0113 462 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0113 462 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0113 462 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0113 462 PRINTS E-class P450 group I signature 184 202 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0113 462 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0113 462 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0113 462 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0113 462 PRINTS E-class P450 group I signature 93 114 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0113 462 Gene3D Cytochrome P450 27 458 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0113 462 PANTHER CYTOCHROME P450 71B11-RELATED 19 458 IPR050193 -
Lcy2g0113 462 CDD CYP71-like 71 458 - -
Lcy2g0113 462 FunFam Cytochrome P450 83B1 26 460 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g0110 Lcy-Chr2:845263 Lcy2g0113 Lcy-Chr2:862055 3.24E-99 dispersed
Lcy2g0113 Lcy-Chr2:862055 Lcy5g2178 Lcy-Chr5:44831685 1.12E-133 dispersed
Lcy2g0111 Lcy-Chr2:850513 Lcy2g0113 Lcy-Chr2:862055 7.89E-239 proximal
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0113 - - - 0.0