Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy2g0113 | ATGGACTGTGATCTTCTTCTCCATTTGTTCTTTCATCCAATTTCCCTCACTGCTTTGATCGTCTTCCTCATCTTCCTTCTCCAAAAATGGTTGAGCTCTTCATCCTCAGAAGCCTCGCCCCCTTCTCCGCCAAAGAAGCTTCCCATTTTCGGACACCTTTTGAGCTTCGGCTCCCATCCCCATCATCTCACTTTCCAAGCCTATGCCCGCCGCTACGGCCCTCTGTTTCTGCTTCACCTCGGCTCCAAGCCCACCATCGTCGTCTCTTCAGCAGAATTGGCTCGCGAAATCATGAAGACCCACGATCTCGTCTTTTCCAACCGACCCAAATCAATCAAATCTGATAAGCTTCTTTACGGCTCCAAAGATATAACCGCAGCTCCTTACGGCGAGTACTGGAGGCAGATGAAAAGCCTGGCCGTGCTCCATCTTTTGAGCAACAAAAGAGTTCGATCCTTTCGCTTTGTCAGAGAAGAAGAAGTCAAATTGATGATCGAGAACATCCAACGAAACCCAGCGTCCGTGAATTTGACAGAATTGTTCTCTCAACTGACCAACAACGTCATTTGCAGGGTGGCTTTAGGGAGAAAATATGGGGTGGGAGAAGATGGGAAGAATCTCCACTCTGTTTTGCTGGAGGGGATGAAATTATTGGGGAGTTTTAGTATCAGAAACTTCATTCCATGGCTGGGCTGGATCGATGCTATCACTGGACTGGATGCCAAAATCGAGAGGGTTGCCAAAGAGTTGGATGCTTTCTTAGACAGAGTGATTGAAGATCATGTCAATCCAGAAAATCGTGACGAGCACAAAGACTTGGTGGACATTCTACTCTGTATACAGAGAGAGAAATCCATGGGTTTTCCCCTGAACATGGATAGCATAAAAGCTTTACTCTTGGACATGTTTGTGGCAGGCAAGGACACGACTTACACATTAATGGAGTGGACAATGTCAGAATTGTTGAGACACCCAGATGCCATGAAGAAATTGCAGAGTGAGATCAGAGAAATTACAGGTGACAGAGCATACGTAGACGATGATGATTTGGAAAAGATGCATTACTTGAAAGCAGTAATCAAAGAAACGTTGCGACTACACCCACCAGTCCCACTTCTTTCTCCTAGAGAACCGACTCAATACGTCAAGCTAAAAGGCTACGATATCAAACCGGGCACTCGAGTTACGATCAATGCATGGGCCATCGGAAGAGACCCGAAACTATGGGAAGAAGCAGAGGAGTTTCGGCCGGAAAGGTTTATGAATAGATGGATGGATTTCAAGGGTCATGATTTCGAGCTAGTCCCGTTTGGTGCAGGGAGAAGAGGATGCCCGGGAGTTGTGTTTGCAATGGTAAATGTTGATGTTAAACTGAAACCTCGAGCTTAG | 1389 | 46.36 | MDCDLLLHLFFHPISLTALIVFLIFLLQKWLSSSSSEASPPSPPKKLPIFGHLLSFGSHPHHLTFQAYARRYGPLFLLHLGSKPTIVVSSAELAREIMKTHDLVFSNRPKSIKSDKLLYGSKDITAAPYGEYWRQMKSLAVLHLLSNKRVRSFRFVREEEVKLMIENIQRNPASVNLTELFSQLTNNVICRVALGRKYGVGEDGKNLHSVLLEGMKLLGSFSIRNFIPWLGWIDAITGLDAKIERVAKELDAFLDRVIEDHVNPENRDEHKDLVDILLCIQREKSMGFPLNMDSIKALLLDMFVAGKDTTYTLMEWTMSELLRHPDAMKKLQSEIREITGDRAYVDDDDLEKMHYLKAVIKETLRLHPPVPLLSPREPTQYVKLKGYDIKPGTRVTINAWAIGRDPKLWEEAEEFRPERFMNRWMDFKGHDFELVPFGAGRRGCPGVVFAMVNVDVKLKPRA | 462 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 862055 | 863517 | - | Maker00007590 | Lcy2g0113 | 624878 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy2g0113 | 462 | PRINTS | P450 superfamily signature | 305 | 322 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0113 | 462 | PRINTS | P450 superfamily signature | 435 | 444 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0113 | 462 | PRINTS | P450 superfamily signature | 444 | 455 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0113 | 462 | PRINTS | P450 superfamily signature | 358 | 369 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0113 | 462 | Pfam | Cytochrome P450 | 41 | 456 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0113 | 462 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 437 | 446 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lcy2g0113 | 462 | SUPERFAMILY | Cytochrome P450 | 40 | 454 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0113 | 462 | PRINTS | E-class P450 group I signature | 294 | 311 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0113 | 462 | PRINTS | E-class P450 group I signature | 314 | 340 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0113 | 462 | PRINTS | E-class P450 group I signature | 69 | 88 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0113 | 462 | PRINTS | E-class P450 group I signature | 184 | 202 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0113 | 462 | PRINTS | E-class P450 group I signature | 434 | 444 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0113 | 462 | PRINTS | E-class P450 group I signature | 357 | 375 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0113 | 462 | PRINTS | E-class P450 group I signature | 398 | 422 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0113 | 462 | PRINTS | E-class P450 group I signature | 93 | 114 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0113 | 462 | Gene3D | Cytochrome P450 | 27 | 458 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy2g0113 | 462 | PANTHER | CYTOCHROME P450 71B11-RELATED | 19 | 458 | IPR050193 | - | |
| Lcy2g0113 | 462 | CDD | CYP71-like | 71 | 458 | - | - | |
| Lcy2g0113 | 462 | FunFam | Cytochrome P450 83B1 | 26 | 460 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy2g0110 | Lcy-Chr2:845263 | Lcy2g0113 | Lcy-Chr2:862055 | 3.24E-99 | dispersed | |
| Lcy2g0113 | Lcy-Chr2:862055 | Lcy5g2178 | Lcy-Chr5:44831685 | 1.12E-133 | dispersed | |
| Lcy2g0111 | Lcy-Chr2:850513 | Lcy2g0113 | Lcy-Chr2:862055 | 7.89E-239 | proximal |
Pathway information