Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0122 ATGGAACGACGACGGCGACGACGGCCTCTGCTACTTCTACTTCAGCTCTGTACCTTCTTCCTCTTCTTCTCTCGCTCTTATGCAGTCGATTTCTTCTTCGATTCGTTTTCAAACGTCTCGAATGGCACTGACATCATCCTCATTAGCGACGCGAGGTTCGATTCTCCTGTAATTCGCCTCAACAACGACTCGAACCCATTATCAATCGGGCGAGCTTTCTATCACACGAAGCTGATCATGAGACCCACTTCGAATTCCACTACGATCTCTTCTTTTTCAACTTCTTTTGTATTCTCAATCTTGCTGGAAGTCGCTACGAGTCCAGGCTTCGGTATGGCCTTTGTTCTTTCCAATTCCACTTCCCCTCCCAACGCCGTGGCCAGTCAATACTTCGGTCTCTTCACAAATTCCACAACCCATACCGTTGCTCCACTTCTCGCCGTCGAATTCGACACCGGCCGAAACACAGAGTTCAACGACCCCGATGATAGCCACATCGGAATCGATTTGAACAGTGTAATTTCAACAAAACAACAGAGCGCTGGGTATTTCGACTCTATTGGGCAATTTATTCCAATTGAGATGAGAAATGGGCAAAACCTTCGCGCTTGGATCGAATTCGATGGGTCCAATTTCGAAATCAATGTCACGATTGCTCCAGTTGGAATTCCTCGTCCTTCGAGACCCACTTTGAGCTTTAGGGATCCTGAAATAGCGAATTATGTATCGACTGAAATGTTTGTGGGATTTTCAGCATCGAAGACGAGATGGATTGAAGCGCAGAGGATTTTAGCTTGGAGTTTTAGTGACACTGGGTCTGCTAGAGAGATTAACACCACAAATTTCCCTGTGTTTATGAGAGAATCACCACCGTCTTCCTTGTCGCCGGGATCTGTTGCCGGCATTGTAATTGGCTGTGTAGTGTTTGTGATCGTAATTTCTGGATTTGGGGGACTTTGGTACTGGCGAAAGAAATTAGCAAAGGAAGAAGAAGATGAAATTGAGGATTGGGAACTCGAATACTGGCCTCACAGATTCTCGAACGAGGAGCTTAGCCAAGCCACGGATGGATTTTCCAATAACAATCTATTGGGCGCCGGCGGATTTGGAAAGGTGTTCAAAGGAACTTTACCAAACAACACAGAAATCGCCGTTAAGTGTGTAAATCACGATTCGAAACAGGGGCTAAAGGAATTCATGGCTGAAATCTCGAGCATGGGCAGGCTTCAGCACAAAAATCTAGTTCAAATGCGAGGATGGTGTCGAAAAGGAAATCAATTAATGTTGGTGTATGATTATATGCCGAATGGAAGCCTTAATCGGTGGATTTTCGACAGACCCACAACGGTCCTCGGCTGGAAACACCGCCGCCGTGTGCTGGCCGACGTTGCAGAGGGGTTGAACTATCTCCACCATGGTTGGGACCAGGTGGTGATTCACAGAGACATAAAGTCGAGCAATGTGTTGCTGGATTCGGACATGAGAGGCAGAGTGGGCGATTTTGGGTTGGCGAAACTGTACCAGCACGGCGAGACTCCGAACACCACTCGGGTTGTTGGGACTTTGGGGTATTTGGCGCCGGAGATTGCGACGGTGGCTACTCCGACGGCGGCTAGCGATGTCTATAGTTTTGGGGTTGTGGTTCTTGAAGTGGCGTGTGGGCGGCGGCCGATTGAGATGGCGGCGGAGGAAGAAGAAATAGTGCTTATTGATTGGGTGAGGGATCTTTACGCCGCTGGACGGCTGATTGCGGCGGCGGACTCGAGAATCAAAGGGGAGTTTGAAGTTGAAGAGATGGAGTTGATGTTGAAGCTTGGTTTGGCTTGTTGTCATCCTGACCCTGAACGGCGACCGACGATGAGGGAGGTGGTGGCGGTTCTGATTGGAGAACAGCCAGCAGCCGATGCGGCGGAGTTGCTGTCGTCGGGATTGGCAAGCCATGCAGTGGACGGCGGAGACTTTGGCTTGTGA 1971 49.26 MERRRRRRPLLLLLQLCTFFLFFSRSYAVDFFFDSFSNVSNGTDIILISDARFDSPVIRLNNDSNPLSIGRAFYHTKLIMRPTSNSTTISSFSTSFVFSILLEVATSPGFGMAFVLSNSTSPPNAVASQYFGLFTNSTTHTVAPLLAVEFDTGRNTEFNDPDDSHIGIDLNSVISTKQQSAGYFDSIGQFIPIEMRNGQNLRAWIEFDGSNFEINVTIAPVGIPRPSRPTLSFRDPEIANYVSTEMFVGFSASKTRWIEAQRILAWSFSDTGSAREINTTNFPVFMRESPPSSLSPGSVAGIVIGCVVFVIVISGFGGLWYWRKKLAKEEEDEIEDWELEYWPHRFSNEELSQATDGFSNNNLLGAGGFGKVFKGTLPNNTEIAVKCVNHDSKQGLKEFMAEISSMGRLQHKNLVQMRGWCRKGNQLMLVYDYMPNGSLNRWIFDRPTTVLGWKHRRRVLADVAEGLNYLHHGWDQVVIHRDIKSSNVLLDSDMRGRVGDFGLAKLYQHGETPNTTRVVGTLGYLAPEIATVATPTAASDVYSFGVVVLEVACGRRPIEMAAEEEEIVLIDWVRDLYAAGRLIAAADSRIKGEFEVEEMELMLKLGLACCHPDPERRPTMREVVAVLIGEQPAADAAELLSSGLASHAVDGGDFGL 656
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 919007 920977 + Maker00007493 Lcy2g0122 624887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0122 656 FunFam L-type lectin-domain containing receptor kinase S.1 343 433 - -
Lcy2g0122 656 SUPERFAMILY Protein kinase-like (PK-like) 335 627 IPR011009 -
Lcy2g0122 656 Pfam Protein kinase domain 360 624 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy2g0122 656 SMART serkin_6 358 634 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy2g0122 656 Gene3D Transferase(Phosphotransferase) domain 1 434 640 - -
Lcy2g0122 656 Pfam Legume lectin domain 29 281 IPR001220 GO:0030246(InterPro)
Lcy2g0122 656 Gene3D - 27 286 - -
Lcy2g0122 656 ProSiteProfiles Protein kinase domain profile. 358 634 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy2g0122 656 PANTHER - 57 631 IPR050528 GO:0005886(PANTHER)
Lcy2g0122 656 ProSitePatterns Protein kinases ATP-binding region signature. 364 386 IPR017441 GO:0005524(InterPro)
Lcy2g0122 656 FunFam L-type lectin-domain containing receptor kinase S.4 434 639 - -
Lcy2g0122 656 ProSitePatterns Legume lectins beta-chain signature. 146 152 IPR019825 -
Lcy2g0122 656 SUPERFAMILY Concanavalin A-like lectins/glucanases 29 273 IPR013320 -
Lcy2g0122 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 478 490 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy2g0122 656 CDD STKc_IRAK 364 627 - -
Lcy2g0122 656 CDD lectin_legume_LecRK_Arcelin_ConA 29 272 IPR001220 GO:0030246(InterPro)
Lcy2g0122 656 Gene3D Phosphorylase Kinase; domain 1 327 433 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g0122 Lcy-Chr2:919007 Lcy5g0187 Lcy-Chr5:1859285 3.48E-164 dispersed
Lcy2g0122 Lcy-Chr2:919007 Lcy5g0186 Lcy-Chr5:1847371 7.95E-159 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65700 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0122 - - - 0.0