Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0145 ATGGCATTTGATCAGAACTCGATTCCCACGGGCTTGCGGCCTTTAAATGTAGCTAGAACTTTAGTTGAAGAACCCCGTATAACACCCGTTGCCAATACGGGTCGAAACTCGGAATGGTTTGTCCCTAACCATCCCCGCGATGCTGCGAGCACAGACTCTGTGCCCGTCCCTTATAAGGGGAATGTCTCCGATATGGGATTTGTCGAGACAGGATATGGAAATGTGGTTACTGGTGTTGCACCGTGGTGCCCTCGAATGCCTCCGCCTCCTGCGCATCCTGCCACGATTCCTGCTGTAGGGTTTGGTTACTGCTCGAACCTGAATGTCAGGGGCAATCGTGGTAGTGCCAATGCTGTTGAGCTTGCTAGCAGTTGCATGGCAATTGGGATTAAACAGAGTCCAAATTTGAGTAATCGAGTTGGGGGAGGTGGCATGGAATTTGTGAGCAATAATATCTCAATGGGGTCTGGGGATAGTACCAATTTATGCAATAAGGTTGCTGTCAACGGTGATCAGATCAGTAGTGATAGTACTTCTGGATTTAGCTCCCACTTGGGGAATTCAGTGGGTGGGAATGCGGCTGACCAAGTGAGCGAGGAGAGTGGAGATGCTTCCATTTCGAAAAAGAAAGTTAAGTTTATGTGCAGTTTCGGTGGCAAGATTTTTCCTAGACCGAGTGATGGTATGTTGAGATATGTTGGAGGCCAAACAAGGATTATAAGTGTTAGAAGAGATGTGACTTTCAATGAACTTGCGCGAAAGATGGTTGATACCTGTGGGCAGGCTGTGGTTATTAAGTATCAGCTCCCCGATGAGGATCTTGATGCTTTAGTATCTGTTTCATGCCCAGATGATCTTGATAATATGATGGATGAGTATGAGAAGTTAGTTGAGAGGTCTTCAGATGGATCGGCTAAATTGAGGATGTTTTTGTTCTCTGTTTCAGAACTTGACTCTTCAGGTATGGTGCAGTTTGGCGATTTGCACGACAGTGGGCAGAGATATGTTGAAACAGTGAATGAGATATTTGATGGCGTCGGTGGCCGTATCACAAGGAAAGAGAGCTTTGCAAGCGCCACCTCAACTCAGAATTCTGATTTAAGTGGGACTGAGGCAATTGATATCTCAAATAGCGATCTAGGAATTGTGAGTGGGCCTCCATCCACAACATTGTCCTCATCTGGAGGAAATTTAGGTACTTCAGCTGCTATTGGCCCTGGATTAGTGAAGGTAGATCCCGTCTCTGCAGATTTTGTAGATGCCTCTTCTGTTCCATCAAGTATTCCTGCGGTCAACTCTGCTCCTCCTGAAGTTTCTTCCCAGCCAGAAGCGGAGTTAGGAAGGTCTATGCCTGTTACTCTAATGCAGCAGAAACCAGGTATTGACTTTCCTCCTCCCGTGTCTCAATTGCAGCCTACTGTTGATCCTCGCCAAGCAGCACGTGTGGACTGTATACAATTTCATCCACAACTAGGCTTTTCAAATCCTCATCATTTAGGGACATCTGGAACTATGTTTTTGCAACAGCCAAATACTCTTGGAATTACCCCTCATCAGTTTATCCCTGCAGTTCACATGACGATGGCTCCCTCTTCTTCTCACATCAGTATTATGCCAAATACCTATCAATCGTTGGTGCAGTATCCACAATCCCAGACGGAATATTTTGCCAATGCAAGCTCATTTGGTCCAAGGTTTTTCCAGGTATCTGCAGAACAAGGCTACAACTCACGTCAGGTTCCAGCTCCTCCAGTATCGGTAGGAGGTGGATTTGGTTTACATCAGGTAGCGTGGTCTGATCAGGCAGTTCTATCTGATGAATTGGCATCCCATCATCAGGCAACTTCTTCTGAGAAGATCGCAAGGTTGAATGACTGTTACTTCTGCCAGAAAGCAGTGCCTCATGCTCATTCCAATTCTCTGTTGCAGGATCAAAGAGGAAATTTGACAAACCCTGTACCTGATTCAAAATTTTCTTATTACAGTCATCACCCTGAAGATCAGTCAACAGCCCATCCAATGAAAAATATAACAGAAACTGGAGCTTTGGGGCAACAAACTGTTGAACAAGGTGTTGGAATGCAAACCAGGGTCTTTAGTCCCATGGATCCAGAAGTTGGAAAACCTTCAGTGGAGGCTATTGGCTTCCCACATATTGAGGGTCAGCATGAGAATGACAGCACTCTAAAAGATCAATGTAATCTTGATCATAGTAGGATCTCAGCTCTGCAGGGTGCTCTTGGGAGGCAAGGTGATATTCAGTCACCCCATGTTGCTGTTGTGGAACAGATTCCTCAGTCTGGCCAAGTTGATACTCTCCAGCAACATCATGCAGCTGTAGAGAATCAGTTCCATCCAAATTCAGATGTGGATAAGCACAGTATTCGTTTTGGAGGTGCTCCTATCCTTGCTTCAGAGTACAGCATTCGTGAAATTCCAAAAGAGTACTCTAATAGTCATCATGGCATTATTCCAAACCAAAATGCTACCCACACTGGAATTTGGTATGACCATATCAGACCAATTGTTGGAAATTTGGAAACTCTAAGTTTATGCCCAACTGATATTTGTGCTAATTTGGATCATTGCAAGTCACCCATTGAAAGAACTAGGAAGGAGGACAATTTTGATAACTGTTCACAACCAGTCTCAGAGAGGGAAGTATTACATGATACCAATTTTGTAGACCCAAAAGTGGTTCTCGACAAAAATCACATGAAACCAACTACTTGTGCTTGCTCTTCGTCAGAGGTTCCCTATTTGTTGAATGAACGACCTGTTGAGTCCAGTGAAGTGGCACAACCTCCTATCAGGGGCTCTCCCAGAACATTACCACAATCAGAAAATGGAATACAACAATTAGAATCCAATGAAGTCTGTCATAGCAGAAATCCCCAGTTTTTTGACATGAAGACTGAACATATAAATAATAAAGTCCCAGTTTCTGCTGAGTGGAAGGAGGACACTTCTCTATTCGAATCTAGGATGGTATCTGGTGATGTTGAATGCGTATCTTCGTCTAGCAGGACTGGAAATGTGCAGGACACCGCAAATTCGCTCTTCAGCAATCAGGATCCTTGGAACTTACAGCATGATGCCCATTTTTTGCCTCCTAGACCGAATAAAATTCAACCAGGGAATGAAGCCATTGCCACTGGGGAACCCTTGGCAGAGAGTCCTTTCAGGAATATTGGTGAACTAAATATGGAAGCATTACTGGATGATGGAGTATGTCACCCATCGATTAATGCAAACAAGGGCTCTTCAGAGGAACAAATTAGGAAAGATCTTCAAGCTGTTGCTGAGGGTGTAGCTGCTTCTGTTCTTCAGTCAGCACAATCCTCCAACTCTGACTTGCATGAAAGAAGTGATTCAGTTTGTGAGACTAGTACAGGAGATGTTCAAAATAATAATGATGCCAGGACAAGACATTCAGAAAAAGCCAATCTCGGTTTTCCTATGTCAGAAGGCATTGGCCACTTGCAGGTAATAAAAAATAGTGACCTTGAAGAACTAAAAGAATTAGGTTCTGGCACCTTTGGCACTGTTTATCATGGAAAATGGAGGGGGACTGATGTTGCTATCAAACGAGTCAATGATAGGTGTTTTGCTGGGAAGCCTTCTGAACAAGATCGCATGGTTGTTTTTAGAGAGGACTTTTGGAATGAAGCAATTAAGCTTGCTGATTTGCACCACCCAAATGTGGTTGCTTTTTATGGTGTTGTGCTTGATGGCCCTGGGGGCTCTGTGGCAACAGTAACTGAATATATGGTTAATGGCTCGCTCAGAAATGCTTTGCTGAAGAATGAGAAGAATCTTGACAAGCGTAAGCGCCTCTTGATTGCAATGGATGTGGCTTTTGGAATGGAATACCTGCACAGAAAGAATATAGTGCACTTTGATTTAAAAAGTGATAATCTGCTTGTCAACCTTCGAGATCCTCATCGCCCAATATGCAAGGTTGGTGACTTGGGCCTATCCAAGGTGAAACGTCAGACATTGATATCAGGTGGTGTGCGGGGAACACTTCCATGGATGGCGCCGGAGCTTTTGAATGGGAGCAGCAATCTGGTGTCCGAGAAGGTTGATGTGTTTTCCTTTGGTATTGTCTTGTGGGAGCTCCTTACTGGAGAAGAACCTTACGCAAATTTGCATTATGGGGTCATCATAGGTGGCATTGTAAGCAACACATTGCGGCCGGAAGTACCAGAATCTTGTGATCCAGAATGGAGGTCACTTATGGAAAGATGCTGGTCATCAGAGCCATCAGAGAGGCCAAACTTCACTGAAATTGCACATAACTTGCGCTCCATGGCTGCAAAGGTTCCTGCGAAAGTACCAAATCAGCAGCAATAG 4356 44.47 MAFDQNSIPTGLRPLNVARTLVEEPRITPVANTGRNSEWFVPNHPRDAASTDSVPVPYKGNVSDMGFVETGYGNVVTGVAPWCPRMPPPPAHPATIPAVGFGYCSNLNVRGNRGSANAVELASSCMAIGIKQSPNLSNRVGGGGMEFVSNNISMGSGDSTNLCNKVAVNGDQISSDSTSGFSSHLGNSVGGNAADQVSEESGDASISKKKVKFMCSFGGKIFPRPSDGMLRYVGGQTRIISVRRDVTFNELARKMVDTCGQAVVIKYQLPDEDLDALVSVSCPDDLDNMMDEYEKLVERSSDGSAKLRMFLFSVSELDSSGMVQFGDLHDSGQRYVETVNEIFDGVGGRITRKESFASATSTQNSDLSGTEAIDISNSDLGIVSGPPSTTLSSSGGNLGTSAAIGPGLVKVDPVSADFVDASSVPSSIPAVNSAPPEVSSQPEAELGRSMPVTLMQQKPGIDFPPPVSQLQPTVDPRQAARVDCIQFHPQLGFSNPHHLGTSGTMFLQQPNTLGITPHQFIPAVHMTMAPSSSHISIMPNTYQSLVQYPQSQTEYFANASSFGPRFFQVSAEQGYNSRQVPAPPVSVGGGFGLHQVAWSDQAVLSDELASHHQATSSEKIARLNDCYFCQKAVPHAHSNSLLQDQRGNLTNPVPDSKFSYYSHHPEDQSTAHPMKNITETGALGQQTVEQGVGMQTRVFSPMDPEVGKPSVEAIGFPHIEGQHENDSTLKDQCNLDHSRISALQGALGRQGDIQSPHVAVVEQIPQSGQVDTLQQHHAAVENQFHPNSDVDKHSIRFGGAPILASEYSIREIPKEYSNSHHGIIPNQNATHTGIWYDHIRPIVGNLETLSLCPTDICANLDHCKSPIERTRKEDNFDNCSQPVSEREVLHDTNFVDPKVVLDKNHMKPTTCACSSSEVPYLLNERPVESSEVAQPPIRGSPRTLPQSENGIQQLESNEVCHSRNPQFFDMKTEHINNKVPVSAEWKEDTSLFESRMVSGDVECVSSSSRTGNVQDTANSLFSNQDPWNLQHDAHFLPPRPNKIQPGNEAIATGEPLAESPFRNIGELNMEALLDDGVCHPSINANKGSSEEQIRKDLQAVAEGVAASVLQSAQSSNSDLHERSDSVCETSTGDVQNNNDARTRHSEKANLGFPMSEGIGHLQVIKNSDLEELKELGSGTFGTVYHGKWRGTDVAIKRVNDRCFAGKPSEQDRMVVFREDFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNALLKNEKNLDKRKRLLIAMDVAFGMEYLHRKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKRQTLISGGVRGTLPWMAPELLNGSSNLVSEKVDVFSFGIVLWELLTGEEPYANLHYGVIIGGIVSNTLRPEVPESCDPEWRSLMERCWSSEPSERPNFTEIAHNLRSMAAKVPAKVPNQQQ 1451
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1143771 1151180 + Maker00007570 Lcy2g0145 624910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0145 1451 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1162 1259 - -
Lcy2g0145 1451 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 230 314 - -
Lcy2g0145 1451 CDD PB1_UP2 214 312 - -
Lcy2g0145 1451 Pfam Protein tyrosine and serine/threonine kinase 1171 1435 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy2g0145 1451 SUPERFAMILY Protein kinase-like (PK-like) 1160 1433 IPR011009 -
Lcy2g0145 1451 MobiDBLite consensus disorder prediction 928 947 - -
Lcy2g0145 1451 SUPERFAMILY CAD & PB1 domains 226 316 - -
Lcy2g0145 1451 CDD STKc_MAP3K-like 1175 1435 - -
Lcy2g0145 1451 PANTHER SERINE-THREONINE PROTEIN KINASE 171 1438 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Lcy2g0145 1451 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1260 1451 - -
Lcy2g0145 1451 Gene3D Phosphorylase Kinase; domain 1 1162 1259 - -
Lcy2g0145 1451 ProSiteProfiles Protein kinase domain profile. 1169 1436 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy2g0145 1451 SMART PB1_new 225 314 IPR000270 GO:0005515(InterPro)
Lcy2g0145 1451 Pfam PB1 domain 230 313 IPR000270 GO:0005515(InterPro)
Lcy2g0145 1451 Gene3D - 231 314 - -
Lcy2g0145 1451 SMART serkin_6 1169 1439 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy2g0145 1451 MobiDBLite consensus disorder prediction 1111 1139 - -
Lcy2g0145 1451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1297 1309 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy2g0145 1451 ProSitePatterns Protein kinases ATP-binding region signature. 1175 1206 IPR017441 GO:0005524(InterPro)
Lcy2g0145 1451 Gene3D Transferase(Phosphotransferase) domain 1 1260 1451 - -
Lcy2g0145 1451 PRINTS Tyrosine kinase catalytic domain signature 1406 1428 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy2g0145 1451 PRINTS Tyrosine kinase catalytic domain signature 1254 1267 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy2g0145 1451 PRINTS Tyrosine kinase catalytic domain signature 1362 1384 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy2g0145 1451 PRINTS Tyrosine kinase catalytic domain signature 1291 1309 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g0145 Lcy-Chr2:1143771 Lcy8g1647 Lcy-Chr8:43105935 1.39E-153 dispersed
Lcy4g0118 Lcy-Chr4:1577270 Lcy2g0145 Lcy-Chr2:1143771 1.53E-27 transposed
Lcy4g1676 Lcy-Chr4:42410067 Lcy2g0145 Lcy-Chr2:1143771 5.22E-147 transposed
Lcy6g1165 Lcy-Chr6:13462215 Lcy2g0145 Lcy-Chr2:1143771 8.18E-26 transposed
Lcy2g0145 Lcy-Chr2:1143771 Lcy5g2226 Lcy-Chr5:45283082 2.07E-36 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65702 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0145 - - - 0.0