Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0193 ATGGTGGCGAAAACTGAAGGCAAAGCCATAGGCATCGACCTCGGCACCACCTACAGCTGCGTCGGGGTTTGGCTCAACGATCGTGTGGAAATTATCCCCAATGATCAAGGTAACCGAACCACTCCCTCTTACGTAGCTTTCACTGACACCGAGCGTTTGATCGGCGATGCGGCCAAGAACCAGGTCGCTATGAACCCTCAGAACACTGTCTTCGACGCCAAGCGTTTGATCGGCCGGAGACTCTCCGATCCCTCTGTTCAGAGCGACATGAAGCTCTGGCCATTCAAAGTGATCGCCGGACCTGGCGACAAGCCGATGATCATTGTGAACTACAAAGGCGAAGAGAAGCAGTTCGCTCCGGAGGAGATTTCTTCTATGGTTCTGATCAAGATGAGAGAAATCGCTGAAGCTTTTCTAGGGCAAGATATCAAGAACGCCGTAATCACAGTCCCTGCTTATTTCAACGATTCACAGAGACAAGCGACTAAAGACGCCGGTGCCATTGCTGGACTCAACGTGATGCGTATCATCAACGAGCCGACGGCGGCCGCAATCGCGTACGGTCTGGACAAAAAGGCCTCTCGTAGAGGCGAACAGAACGTGCTGATCTTCGATCTCGGCGGCGGAACGTTCGATGTGTCGCTCTTGACCATAGAAGAGGGCATTTTCGAGGTCAAGGCCACCGCCGGCGATACTCATCTCGGCGGCGAAGATTTCGACAACAGACTCGTCAATCACTTCGTGACAGAGTTCAGACGCAAGAACAAGAAAGACATAAGCGGCAACGCGAGGGCGCTGAGGAGGCTGAGGACGGCCTGCGAGCGCGCCAAAAGAGCGCTGTCGTCGACGACGCAAACGACGATCGAAGTAGATTCGCTTTACGAAGGGATTGATTTCTATGCGACGATAACGAGGGCGAGATTCGAGGAATTGTGCATGGACATGTTCGTGAAGTGTATGGAGCCTGTGGAGAAATGTATCCGTGATGCTAAAATTGATAAGAGCCAAGTTCATGAGGTGGTTTTGGTTGGTGGATCGACGAGAATTCCGAAAGTTCAGCAGCTTTTGCAGGATTACTTCAATGGAAAGGAGCTCTGTAAAAGTATCAACCCAGATGAGGCCGTTGCTTACGGTGCTGCTGTTCAGGCTGCAATTCTAAGTGGAGAAGGTGACGAGAAAGTTCAAGACTTGCTACTGCTCGACGTCACGCCGCTCAGTCTCGGTCTAGAAACGGCCGGCGGAGTCATGACAGTCCTAATTCCAAGGAACACAACAATCCCAACGAAGAAAGAACAAATCTTCTCCACATACTCAGACAACCAACCGGGAGTGTTAATCCAAGTCTACGAAGGAGAGCGAGCAAGAACCAAAGACAACAATCTACTCGGAAAGTTCGAGCTCACCGGCATTCCTCCAGCGCCTCGAGGAGTCCCGCAAATCAACGTCATCTTCGACATCGACGCCAACGGCATTCTGAACGTAACAGCAGAGGACAAGACTGCAGGGGTGAAGAACAAGATCACGATCACGAACGACAAGGGGCGAATGAGCAAAGACGAGATAGAGAGGCTGGTGAAGGAGGCAGAGAAGTACAGAGCAGAGGATGAGGAAGTGAAGAAGAAGGTGGAGGCAAAGAATGCGTTGGAGAATTATGCGTATAATATGAGGAATACTGTGAGGGATGAGAAATTTGCAGGGAAATTGAATCCAGATGACAAGCAGAAGATAGAGAAATCTGTGGAGGAGAGCATTGAGTGGTTGGATAGGAACCAGTTGGCGGAGGTTGATGAGCTTGAGGACAAGCTGAAGGAGCTCGAGGGTATCTGTAATCCCATCATTGCTAAGATGTACCAGGGCGGCGCTGGCGGCGGGGCTCCGATGGCTGATGATATGCCTGGTGGGGCTTCCGCCGAGTCCGGCGGTGGGGCTGGGCCGAAGATTGAGGAGGTTGATTAA 1956 51.69 MVAKTEGKAIGIDLGTTYSCVGVWLNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRLSDPSVQSDMKLWPFKVIAGPGDKPMIIVNYKGEEKQFAPEEISSMVLIKMREIAEAFLGQDIKNAVITVPAYFNDSQRQATKDAGAIAGLNVMRIINEPTAAAIAYGLDKKASRRGEQNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRLVNHFVTEFRRKNKKDISGNARALRRLRTACERAKRALSSTTQTTIEVDSLYEGIDFYATITRARFEELCMDMFVKCMEPVEKCIRDAKIDKSQVHEVVLVGGSTRIPKVQQLLQDYFNGKELCKSINPDEAVAYGAAVQAAILSGEGDEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVIFDIDANGILNVTAEDKTAGVKNKITITNDKGRMSKDEIERLVKEAEKYRAEDEEVKKKVEAKNALENYAYNMRNTVRDEKFAGKLNPDDKQKIEKSVEESIEWLDRNQLAEVDELEDKLKELEGICNPIIAKMYQGGAGGGAPMADDMPGGASAESGGGAGPKIEEVD 651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1510056 1513499 - Maker00007500 Lcy2g0193 624958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0193 651 Gene3D - 71 126 - -
Lcy2g0193 651 FunFam Heat shock 70 kDa protein 197 262 - -
Lcy2g0193 651 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
Lcy2g0193 651 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Lcy2g0193 651 Gene3D - 10 384 - -
Lcy2g0193 651 Coils Coil 266 286 - -
Lcy2g0193 651 Coils Coil 588 608 - -
Lcy2g0193 651 SUPERFAMILY Actin-like ATPase domain 197 388 IPR043129 -
Lcy2g0193 651 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Lcy2g0193 651 MobiDBLite consensus disorder prediction 619 651 - -
Lcy2g0193 651 FunFam Heat shock 70 kDa 235 318 - -
Lcy2g0193 651 FunFam Heat shock protein 70 10 196 - -
Lcy2g0193 651 PANTHER HEAT SHOCK PROTEIN 70KDA 9 579 IPR013126 GO:0005524(InterPro)|GO:0005737(PANTHER)|GO:0140662(InterPro)
Lcy2g0193 651 Gene3D - 545 619 IPR029048 -
Lcy2g0193 651 FunFam Heat shock 70 kDa 391 545 - -
Lcy2g0193 651 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Lcy2g0193 651 PRINTS 70kDa heat shock protein signature 396 415 - -
Lcy2g0193 651 PRINTS 70kDa heat shock protein signature 36 48 - -
Lcy2g0193 651 PRINTS 70kDa heat shock protein signature 209 219 - -
Lcy2g0193 651 PRINTS 70kDa heat shock protein signature 8 21 - -
Lcy2g0193 651 PRINTS 70kDa heat shock protein signature 58 66 - -
Lcy2g0193 651 PRINTS 70kDa heat shock protein signature 369 389 - -
Lcy2g0193 651 PRINTS 70kDa heat shock protein signature 146 166 - -
Lcy2g0193 651 PRINTS 70kDa heat shock protein signature 477 493 - -
Lcy2g0193 651 PRINTS 70kDa heat shock protein signature 337 353 - -
Lcy2g0193 651 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Lcy2g0193 651 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 624 IPR029048 -
Lcy2g0193 651 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 544 IPR029047 -
Lcy2g0193 651 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Lcy2g0193 651 FunFam Heat shock protein 70 546 619 - -
Lcy2g0193 651 Coils Coil 514 545 - -
Lcy2g0193 651 Gene3D - 192 366 - -
Lcy2g0193 651 FunFam Heat shock cognate 70 kDa protein 2 319 366 - -
Lcy2g0193 651 Gene3D Actin; Chain A, domain 4 235 318 - -
Lcy2g0193 651 FunFam Heat shock 70 kDa protein 71 126 - -
Lcy2g0193 651 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g1840 Lcy-Chr10:42695540 Lcy2g0193 Lcy-Chr2:1510056 2.58E-287 dispersed
Lcy12g1563 Lcy-Chr12:35600808 Lcy2g0193 Lcy-Chr2:1510056 4.15E-284 dispersed
Lcy2g0193 Lcy-Chr2:1510056 Lcy3g1987 Lcy-Chr3:46979478 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0193 K03283 - csv:101215564 1191.41