Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0274 ATGATGTGCTCGTTGCGAGTCGGAGCCGCGATTTTGATCATACAGAAATTCGAAGTTAATTCGCTTGTGGAGTTGGTGCCGAAATATAAGGTGACGGTTGCGCCGTTTGTGCCGCCTATTGTATTGGCGATTGCGAAGAGCCCGGCTGTGGACCGTGCCGACATGTCGTCCATAAGGATGGTGTTGTCGGGAGCGGCACCGCTCGGGAAGGAGCTTGAAGATGCGTTTAGAGCCAAGCTTCCGCATGCGATTCTCGGGCAGGGATATGGAATGACAGAGTCGGGGTCGGTGCTGACGATGTCCCTGGCGTTTGCAAAGGAGAGGTTCGAGATAAAATCAGGAGCTTGTGGGACAGTGATGAGAAATTCAAAGATGAAGATCATAAACCCTCAAACGGGAGTTTCTCTTCCAAGGAATCAACCTGGGGAGATTTGTATTAGAAGCCCTCAGATGATGAAAGGATACCTCAACGACGAAGAGGCCACGAAGGGCATAATCGACGAAGACGGATGGCTTCACACCGGCGACATAGGTTTCGTCGACGACGACGACGAGGTCTTCATCGTCGATCGTCTCAAGGAACTGATCAAATACAAAGGCTTCCAAGTGGCGCCGGCGGAGTTGGAAGCCCTGCTGATTTCACACAGCCAGATCGCCGACGCTGCAGTTATCCCTTTGAAAGATGAAGTTGCTGGAGAGGTTCCGGTTGCGTTCATTGTCCGATCCGACGGGTTCAACATCACCGAGGATGAAATTAAGCAATACATCTCCAAACAGGTTGTGTTTTATAAGAGGATTAATCGCGTCTTCTTCGTGGATTCCATCCCTAAAAGTCCTTCTGGCAAAATCTTGCGGAAACAACTTCGAAATTTGCTCGCAGCCAGTATTCCCAACTAG 897 50.28 MMCSLRVGAAILIIQKFEVNSLVELVPKYKVTVAPFVPPIVLAIAKSPAVDRADMSSIRMVLSGAAPLGKELEDAFRAKLPHAILGQGYGMTESGSVLTMSLAFAKERFEIKSGACGTVMRNSKMKIINPQTGVSLPRNQPGEICIRSPQMMKGYLNDEEATKGIIDEDGWLHTGDIGFVDDDDEVFIVDRLKELIKYKGFQVAPAELEALLISHSQIADAAVIPLKDEVAGEVPVAFIVRSDGFNITEDEIKQYISKQVVFYKRINRVFFVDSIPKSPSGKILRKQLRNLLAASIPN 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2196598 2200825 + Maker00007440 Lcy2g0274 625039
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0274 298 Pfam AMP-binding enzyme C-terminal domain 207 282 IPR025110 -
Lcy2g0274 298 SUPERFAMILY Acetyl-CoA synthetase-like 2 294 - -
Lcy2g0274 298 Gene3D - 194 295 IPR045851 -
Lcy2g0274 298 Gene3D - 1 193 IPR042099 -
Lcy2g0274 298 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 289 - GO:0016405(PANTHER)
Lcy2g0274 298 FunFam 4-coumarate--CoA ligase 2 194 295 - -
Lcy2g0274 298 Pfam AMP-binding enzyme 1 156 IPR000873 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g0274 Lcy-Chr2:2196598 Lcy3g1967 Lcy-Chr3:46817260 2.85E-144 dispersed
Lcy2g0271 Lcy-Chr2:2171317 Lcy2g0274 Lcy-Chr2:2196598 4.27E-205 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0274 K01904 - csv:101218077 493.041