Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy2g0274 | ATGATGTGCTCGTTGCGAGTCGGAGCCGCGATTTTGATCATACAGAAATTCGAAGTTAATTCGCTTGTGGAGTTGGTGCCGAAATATAAGGTGACGGTTGCGCCGTTTGTGCCGCCTATTGTATTGGCGATTGCGAAGAGCCCGGCTGTGGACCGTGCCGACATGTCGTCCATAAGGATGGTGTTGTCGGGAGCGGCACCGCTCGGGAAGGAGCTTGAAGATGCGTTTAGAGCCAAGCTTCCGCATGCGATTCTCGGGCAGGGATATGGAATGACAGAGTCGGGGTCGGTGCTGACGATGTCCCTGGCGTTTGCAAAGGAGAGGTTCGAGATAAAATCAGGAGCTTGTGGGACAGTGATGAGAAATTCAAAGATGAAGATCATAAACCCTCAAACGGGAGTTTCTCTTCCAAGGAATCAACCTGGGGAGATTTGTATTAGAAGCCCTCAGATGATGAAAGGATACCTCAACGACGAAGAGGCCACGAAGGGCATAATCGACGAAGACGGATGGCTTCACACCGGCGACATAGGTTTCGTCGACGACGACGACGAGGTCTTCATCGTCGATCGTCTCAAGGAACTGATCAAATACAAAGGCTTCCAAGTGGCGCCGGCGGAGTTGGAAGCCCTGCTGATTTCACACAGCCAGATCGCCGACGCTGCAGTTATCCCTTTGAAAGATGAAGTTGCTGGAGAGGTTCCGGTTGCGTTCATTGTCCGATCCGACGGGTTCAACATCACCGAGGATGAAATTAAGCAATACATCTCCAAACAGGTTGTGTTTTATAAGAGGATTAATCGCGTCTTCTTCGTGGATTCCATCCCTAAAAGTCCTTCTGGCAAAATCTTGCGGAAACAACTTCGAAATTTGCTCGCAGCCAGTATTCCCAACTAG | 897 | 50.28 | MMCSLRVGAAILIIQKFEVNSLVELVPKYKVTVAPFVPPIVLAIAKSPAVDRADMSSIRMVLSGAAPLGKELEDAFRAKLPHAILGQGYGMTESGSVLTMSLAFAKERFEIKSGACGTVMRNSKMKIINPQTGVSLPRNQPGEICIRSPQMMKGYLNDEEATKGIIDEDGWLHTGDIGFVDDDDEVFIVDRLKELIKYKGFQVAPAELEALLISHSQIADAAVIPLKDEVAGEVPVAFIVRSDGFNITEDEIKQYISKQVVFYKRINRVFFVDSIPKSPSGKILRKQLRNLLAASIPN | 298 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 2196598 | 2200825 | + | Maker00007440 | Lcy2g0274 | 625039 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy2g0274 | 298 | Pfam | AMP-binding enzyme C-terminal domain | 207 | 282 | IPR025110 | - | |
Lcy2g0274 | 298 | SUPERFAMILY | Acetyl-CoA synthetase-like | 2 | 294 | - | - | |
Lcy2g0274 | 298 | Gene3D | - | 194 | 295 | IPR045851 | - | |
Lcy2g0274 | 298 | Gene3D | - | 1 | 193 | IPR042099 | - | |
Lcy2g0274 | 298 | PANTHER | LONG-CHAIN-FATTY-ACID--COA LIGASE | 1 | 289 | - | GO:0016405(PANTHER) | |
Lcy2g0274 | 298 | FunFam | 4-coumarate--CoA ligase 2 | 194 | 295 | - | - | |
Lcy2g0274 | 298 | Pfam | AMP-binding enzyme | 1 | 156 | IPR000873 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy2g0274 | Lcy-Chr2:2196598 | Lcy3g1967 | Lcy-Chr3:46817260 | 2.85E-144 | dispersed | |
Lcy2g0271 | Lcy-Chr2:2171317 | Lcy2g0274 | Lcy-Chr2:2196598 | 4.27E-205 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy2g0274 | K01904 | - | csv:101218077 | 493.041 |