Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0337 ATGAGGCTAGCTCAGTCCAGCGTTTTGGTGCTTTCACTTTCGGTTTTAGTCTGCATTGGCTTCGTCGGAGCTCGGAAGATGTTGTTTTTGGCTCATGACAGTGCCAGGGACAACAACAGCTTGGCGACTGCATTGGAGATCACCAACGGGTGCCAGTCAAAGAAAGTTTATTGTTGTGAGTGCTTCTTCTCAAGCTCTGAGAAGATGATCAATAATGGCACAGGCCAACTGAGGGATGCCTCGCCGAATACTCGAAGGAACCTCTCAAAATCAGATGATGAGCTCCTCATATGTGATACATGCTCCAGTTTTCTTCTTTTTCCTTGGGATGCTAGCTGTGCTGCTTCAGCAGATTTGTTAAGCGAGAACCTCCACTCAATAAGTTACTTTGACTTTCACACACTGAAAAAGGCAACAAAGAATTTTAATCCGGAATATCTTCTAGGCCAGGGAGGATTTGGACCTGTCTATCTGGGAACGCTAGAAGATGGAAGATTGGTTGCAATTAAGAAACTTTCACTTAACAAATCCCAACAAGGAGAACCAGAATTTTTATCAGAGGTCAGACTGATAACAAGCATCCAACACAAGAACCTTGTTCGCCTGCTTGGTTGTTGCTCAGATGGACCTCAACGGCTACTCGTGTATGAATACATGGAGAACAGGAGCTTGGATCTCATAATATATGGGGGAAGTGACCAATTCCTCAACTGGAACACCAGACTGAAGATTATCAGAGGCATTGCCAAAGGGTTGCAGTATCTACATGAGGATTCCCATCTAAGAATTATTCACCGAGACATCAAAGCAAGCAACATTCTTCTTGATGACAAATTTCAACCGAAGATTGGTGATTTTGGGCTGGCCAGGTTCTTCCCTGATGACCAAGCTTACCTTAGCACTACATTTGCTGGAACTCTAGGTTACACAGCACCAGAATATGCAATTAGGGGAGAACTGTCAGAGAAGGCTGATGTATACAGTTTTGGAGTTCTTGTGCTTGAAATCATCAGTGGCAGAAAAAACACAAATCTTTCTTTACCAACCGAAATGCAGTATCTTCCTGAATATGCATGGAAACTATATGAGAGGTCTGCAGTAATCGAACTTGTGGATCCAAAGATGAAGGATGGTGAATATGCGGAGAAGGATGTAGCACATGCAATTCAGGTTGCTTTGTTGTGTCTTCAGCCTCATGGAAGTCTGAGACCTGCAATGTCTGAGATTGTTGCCATGCTAACATACAAATTTGAAATCGTTCAAACACCTTTGAAACCAGCTTTCTTGGAAAGAAGGCATAGAAAGAACAGAGATCTCTCGTTGACTAATTATGCAGATACTACTCCTTCTCCTTTACAGTGA 1362 43.02 MRLAQSSVLVLSLSVLVCIGFVGARKMLFLAHDSARDNNSLATALEITNGCQSKKVYCCECFFSSSEKMINNGTGQLRDASPNTRRNLSKSDDELLICDTCSSFLLFPWDASCAASADLLSENLHSISYFDFHTLKKATKNFNPEYLLGQGGFGPVYLGTLEDGRLVAIKKLSLNKSQQGEPEFLSEVRLITSIQHKNLVRLLGCCSDGPQRLLVYEYMENRSLDLIIYGGSDQFLNWNTRLKIIRGIAKGLQYLHEDSHLRIIHRDIKASNILLDDKFQPKIGDFGLARFFPDDQAYLSTTFAGTLGYTAPEYAIRGELSEKADVYSFGVLVLEIISGRKNTNLSLPTEMQYLPEYAWKLYERSAVIELVDPKMKDGEYAEKDVAHAIQVALLCLQPHGSLRPAMSEIVAMLTYKFEIVQTPLKPAFLERRHRKNRDLSLTNYADTTPSPLQ 453
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2780046 2784517 + Maker00022694 Lcy2g0337 625102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0337 453 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 76 437 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Lcy2g0337 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy2g0337 453 SMART serkin_6 142 415 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy2g0337 453 ProSiteProfiles Protein kinase domain profile. 142 418 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy2g0337 453 FunFam Cysteine-rich receptor-like protein kinase 10 108 218 - -
Lcy2g0337 453 SUPERFAMILY Protein kinase-like (PK-like) 122 414 IPR011009 -
Lcy2g0337 453 CDD STKc_IRAK 148 414 - -
Lcy2g0337 453 Pfam Protein kinase domain 146 346 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy2g0337 453 Gene3D Transferase(Phosphotransferase) domain 1 219 422 - -
Lcy2g0337 453 FunFam Cysteine-rich receptor-like protein kinase 2 219 421 - -
Lcy2g0337 453 Gene3D Phosphorylase Kinase; domain 1 114 218 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g0337 Lcy-Chr2:2780046 Lcy4g0065 Lcy-Chr4:973195 3.89E-97 dispersed
Lcy2g0337 Lcy-Chr2:2780046 Lcy7g1184 Lcy-Chr7:13874394 4.88E-99 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65710 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0337 - - - 0.0