Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy2g0362 ATGCACAGCTACACGTTCTATCTGGCGTGCCGACTGTTCGTGAGCTTGGAGGATCAAAACGAGGTGCAGAGGATCTTCAAGAGGTTCGAAGAGATCGCGTCGGGGATCATCTCGGTGCCGATAGACTTTCCGGGAACGATGTTCAGGAAAGCCATTAGGGCGTCGGAGTTTGTGAGGAAGGAGCTGTCGAAGATCATAAAGCAGAGGAAGATAGATCTGGCGGAGGGGAAGGCCTCGCCGACACAAGACATTCTGTCGCACATGCTTTTGACCAGCGACGGCAACGGCCAATTCATCCACGAAGAAGACATTGCCTCTAAAATTGTCGGTCTCCTCGTCGGCGGCCACGACACCGGCGTCTGCACCTGCACTTTCATCGTCAAGTACTTGGCTACTCTCCCCCACGTCTACGAAAATGTCTACAATGAGCAAATGGAGATAGCAAAATCCAAGGGAGCAGGAGAGCTATTGACTTGGGAAGATCTGCAGAAGATGAAGTATTCTTGGAATGTAGCTTGTGAAGTGCTCAGGCTCTTTCCTCCTGTTCAAGGAGCTTTCAGAGTTGCCCTCACAGACTTTGTCTTCAATGGCTTCAGTATCCCCAAGGGCTGGAAGTTGTATTGGAGTGCGGCGGCAACCCACAAAAACCCGGAGTACTTTCCAGATCCGTACAAGTTCGATCCATCGAGGTTCGAAGGGAAAGGTCCGGCTCCGTTCACGTACGTGCCGTTCGGGGGCGGGCCCAGAATGTGCCCCGGCAAAGAGTATGCAAGGCTAGAGGTGCTAGTGTTTATGCACCATTTGGTCAAGCGCTTCAAAATTGAACTTTGCGATCCTGATGAAAAAGTGACTTGCAATCCAATTCCCATGCCTGTCCACGGCCTCCCCGTCCGCCTCATTCCCCATGCCTAA 912 52.19 MHSYTFYLACRLFVSLEDQNEVQRIFKRFEEIASGIISVPIDFPGTMFRKAIRASEFVRKELSKIIKQRKIDLAEGKASPTQDILSHMLLTSDGNGQFIHEEDIASKIVGLLVGGHDTGVCTCTFIVKYLATLPHVYENVYNEQMEIAKSKGAGELLTWEDLQKMKYSWNVACEVLRLFPPVQGAFRVALTDFVFNGFSIPKGWKLYWSAAATHKNPEYFPDPYKFDPSRFEGKGPAPFTYVPFGGGPRMCPGKEYARLEVLVFMHHLVKRFKIELCDPDEKVTCNPIPMPVHGLPVRLIPHA 303
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2981515 2982828 + Maker00021918 Lcy2g0362 625127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy2g0362 303 SUPERFAMILY Cytochrome P450 2 301 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0362 303 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 244 253 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Lcy2g0362 303 PRINTS E-class P450 group I signature 103 120 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0362 303 PRINTS E-class P450 group I signature 209 233 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0362 303 PRINTS E-class P450 group I signature 251 274 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0362 303 PRINTS E-class P450 group I signature 241 251 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0362 303 PRINTS P450 superfamily signature 114 131 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0362 303 PRINTS P450 superfamily signature 170 181 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0362 303 PRINTS P450 superfamily signature 251 262 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0362 303 PRINTS P450 superfamily signature 242 251 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0362 303 Pfam Cytochrome P450 42 285 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0362 303 Gene3D Cytochrome P450 1 301 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Lcy2g0362 303 PANTHER CYTOCHROME P450 26 2 279 - GO:0004497(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy2g0362 Lcy-Chr2:2981515 Lcy9g1199 Lcy-Chr9:36382889 1.01E-76 dispersed
Lcy2g0362 Lcy-Chr2:2981515 Lcy2g1368 Lcy-Chr2:15669979 1.44E-154 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy2g0362 K20667 - rcu:8282886 469.544